KEGG   Ailuropoda melanoleuca (giant panda): 100478424
Entry
100478424         CDS       T01329                                 
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03082  ATP-dependent chromatin remodeling
aml03083  Polycomb repressive complex
aml04110  Cell cycle
aml04213  Longevity regulating pathway - multiple species
aml04330  Notch signaling pathway
aml04350  TGF-beta signaling pathway
aml04613  Neutrophil extracellular trap formation
aml04919  Thyroid hormone signaling pathway
aml05016  Huntington disease
aml05031  Amphetamine addiction
aml05034  Alcoholism
aml05165  Human papillomavirus infection
aml05169  Epstein-Barr virus infection
aml05200  Pathways in cancer
aml05202  Transcriptional misregulation in cancer
aml05203  Viral carcinogenesis
aml05206  MicroRNAs in cancer
aml05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100478424 (HDAC2)
   03083 Polycomb repressive complex
    100478424 (HDAC2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    100478424 (HDAC2)
   04350 TGF-beta signaling pathway
    100478424 (HDAC2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    100478424 (HDAC2)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    100478424 (HDAC2)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    100478424 (HDAC2)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    100478424 (HDAC2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100478424 (HDAC2)
   05202 Transcriptional misregulation in cancer
    100478424 (HDAC2)
   05206 MicroRNAs in cancer
    100478424 (HDAC2)
   05203 Viral carcinogenesis
    100478424 (HDAC2)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    100478424 (HDAC2)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    100478424 (HDAC2)
   05165 Human papillomavirus infection
    100478424 (HDAC2)
  09164 Neurodegenerative disease
   05016 Huntington disease
    100478424 (HDAC2)
  09165 Substance dependence
   05031 Amphetamine addiction
    100478424 (HDAC2)
   05034 Alcoholism
    100478424 (HDAC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aml03036]
    100478424 (HDAC2)
Enzymes [BR:aml01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100478424 (HDAC2)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     100478424 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     100478424 (HDAC2)
    BRAF-HDAC complex
     100478424 (HDAC2)
    REST complex
     100478424 (HDAC2)
    SHIP complex
     100478424 (HDAC2)
    MiDAC complex
     100478424 (HDAC2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     100478424 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100478424 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    100478424 (HDAC2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 100478424
NCBI-ProteinID: XP_002922834
Ensembl: ENSAMEG00000013147
UniProt: G1M3K7
LinkDB
Position
10:complement(62989856..63016413)
AA seq 488 aa
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDSSGEKTDTKGA
KSEQLSNP
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgtacagtcagggaggcggcaagaagaaagtctgctactactacgatggtgatatt
ggaaattactattatggacagggtcatcccatgaaacctcatagaatccgcatgacccat
aacttgctgctaaattatggcttatatagaaaaatggaaatatataggccccataaagcc
actgctgaagaaatgacaaaataccacagtgatgagtacatcaaatttctacgttcaata
agaccagataacatgtctgagtatagtaagcagatgcagagatttaatgttggagaagat
tgtccagtgtttgatggactctttgagttttgtcagctctcaactggtggctcggttgct
ggggctgtgaagttaaaccgacaacaaactgatatggctgttaactgggctggaggatta
catcacgctaagaaatcagaagcatcaggattctgttacgttaatgatattgtacttgct
atccttgaattactaaagtatcaccagagagtcttatatattgatattgatatccatcat
ggtgatggtgttgaagaagctttttatacaacagatcgtgtaatgactgtatcattccat
aaatatggggaatactttcctggaacaggagacttgagggatattggtgcaggaaaaggc
aaatactatgctgtcaattttccaatgagagatggtatagatgatgaatcctatgggcag
atatttaagcctattatctcaaaggtgatggaaatgtaccagcccagtgctgtggtgctc
cagtgtggtgcggactcactatctggtgacaggctcgggtgcttcaatctgacagtcaaa
ggtcatgctaaatgtgtagaagttgtgaaaactttcaatttaccattactgatgcttggg
gggggtggatacactattcgtaatgttgctcgatgttggacatacgagactgcagttgcc
cttgattgtgagattcccaatgaattgccatataatgattactttgagtattttggcccg
gacttcaaactgcatattagtccttcaaacatgacaaaccagaacactccagaatatatg
gaaaagataaaacagcgtttatttgaaaatttacgcatgttacctcatgcacctggcgtc
cagatgcaagctattccagaagatgctgttcatgaagacagcggagatgaagatggagaa
gatccggataagagaatttctattcgagcctcagacaaacggatagcttgtgatgaagaa
ttctcagattctgaggatgaaggagaaggaggacgtagaaatgtggctgatcataagaaa
ggagcaaagaaagctagaattgaagaagacaagaaggaaacagaggacaaaaaagcagac
gttaaggaagaagataaatccaaggacagtagtggtgaaaaaacagataccaaaggagcc
aaatcagaacagctcagcaacccttga

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