Ailuropoda melanoleuca (giant panda): 100478543
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Entry
100478543 CDS
T01329
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100478543 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aml03021
]
100478543 (TAF5)
03036 Chromosome and associated proteins [BR:
aml03036
]
100478543 (TAF5)
Transcription machinery [BR:
aml03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100478543 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
100478543 (TAF5)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100478543 (TAF5)
STAGA complex
100478543 (TAF5)
TFTC complex
100478543 (TAF5)
SAGA complex
100478543 (TAF5)
SLIK complex
100478543 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_Gbeta
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Tricorn_2nd
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
Beta-prop_ACSF4
VPS8_N
LisH_PAC1
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
100478543
NCBI-ProteinID:
XP_002913943
Ensembl:
ENSAMEG00000017926
UniProt:
G1MHV3
D2GXX8
LinkDB
All DBs
Position
6:104324223..104338832
Genome browser
AA seq
801 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEVPPTLIPSQAGDGAGEGGGGTTNNGPNGGGGNVAAASSSAGG
DGGTPKPSAAVSAVAPAGAAPVPAAAPEAGAPHDRQTLLAVLQFLRQSNLREAEEALRRE
ARLLEEAVAGTGAPGEADGTGTEAASALLSRVTASAPGPAAPDPPGTGASGAAAVSGLAT
GPAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQL
FYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLD
FRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSL
AGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDP
NAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVT
DDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKIL
YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYY
FVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG
NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF
SRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTP
VVHLHFTRRNLVLAAGAYSPQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagttagagccggaggtaccg
ccgacgctgataccttcgcaggcgggggacggcgctggcgagggtggcggcggcactacc
aacaacggccccaacggcggcggcgggaacgttgcggcggcgtcgtcgtcggccggcggg
gatggtgggacccccaaaccctcggcggctgtctccgccgttgctccggcgggggcggcc
ccggtgcccgccgctgctccggaggctggcgctccccacgaccgacagactctgctggcc
gtgctgcagttcctgcggcagagcaacctccgcgaggccgaagaggcgctgcgccgtgag
gcccggctgttggaggaggcagtggcgggcaccggagccccgggagaggcggacggcacc
ggtacagaggcggctagcgcgcttctcagccgggtcacagcctcggcccctggccccgcg
gcccctgaccctccgggcaccggcgcttcgggggccgccgccgtctcgggcttagcgaca
ggtcctgcggctccggggaaagttggaagtgtagctgtagaagaccagccggatgtcagt
gctgtgctgtcagcctacaaccagcaaggagaccccacaatgtatgaagaatactatagt
ggactgaaacacttcattgaatgttccttggactgccatcgggcagagttatcccaactc
ttttatcctctgtttgtacacatgtacttggaactagtctacaatcaacatgagaatgaa
gcaaaatcattttttgagaagttccatggagatcaggaatgttattaccaggatgaccta
cgagtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggat
tttcgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagagg
catcttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacatt
gacatctttgatgggatgccgcgtagtaagcagcagatagatgcgatggtgggaagtttg
gcaggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagag
ccagaaattgaggtgcctttggatgatgaagatgaagaaggagaaaatgaagagggaaaa
cctaaaaagaagaagcctaaaaaggatagcattggatccaaaagcaaaaaacaagatccc
aatgctccacctcaaaacagaatccctctcccagagttgaaagattcagataagttggat
aagataatgaatatgaaagaaaccaccaaacgagtacgccttgggccagactgtttaccc
tccatttgtttctatacattcctcaatgcttaccagggccttactgcagtggatgtcact
gatgattctagtttgattgctggaggttttgcagattcaactgttagagtgtggtctgtg
acacctaaaaagcttcgtagtgttaaacaagcagcagatcttagcctcatagacaaagaa
tcagatgatgtcttagaaagaataatggatgagaaaacagcaagcgagttgaagattttg
tatggtcacagtgggcctgtctatggagccagcttcagtccggataggaactacttgctt
tcctcttcagaagatggaactgttagattgtggagtcttcaaacttttacttgcttggtg
ggatataaaggacacaactacccagtatgggacacacagttttctccatatggatattac
tttgtgtcagggggccacgatcgagtagctcggctatgggctacagaccactatcagcct
ttaagaatatttgctgggcatcttgctgatgtgaattgtaccagattccatccaaattct
aattatgttgctacgggctctgcagacagaactgtgcggctctgggatgtcctgaatggg
aactgtgtaagaatattcactggacacaagggaccaattcattccttgacgttttctccc
aatgggagattcctggctacaggagcaacggatggcagagtactcctttgggatattgga
catggtttgatggttggagaattaaaaggccacactgatacagtctgttcacttaggttc
agtagagatggtgaaattttggcatcaggttcaatggataatacagtccggttgtgggat
gctgtcaaagcatttgaggatttagagaccgatgactttactacagccactgggcatata
aatttacctgagaattcacaggagttattgttgggaacatatatgaccaaatcaacgcca
gttgtacacctccattttactcgaagaaacttggttctagctgcaggagcttatagtcct
caataa
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