Ailuropoda melanoleuca (giant panda): 100478553
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Entry
100478553 CDS
T01329
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03250
Viral life cycle - HIV-1
aml04623
Cytosolic DNA-sensing pathway
aml05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100478553 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100478553 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100478553 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aml03400
]
100478553 (SAMHD1)
DNA repair and recombination proteins [BR:
aml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100478553 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
100478553
NCBI-ProteinID:
XP_002915216
Ensembl:
ENSAMEG00000012463
UniProt:
G1M1D6
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Position
13:67085436..67135524
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AA seq
627 aa
AA seq
DB search
MQGADSDQPFKRPRCDSSPQTPPNIRSAAAERSPGPELRPNHQTWGPEQVCCFLKRSGFS
DPRLLDRFRENKITGLTLLHLNESDLESLGISTLGDRKKLHNYIQQLSEIHVDSMKVIND
PIHGHIELHPLLIRIIDTPQFQRLRYIKQLGGSYYIFPGASHNRFEHSLGVGYLAGCLVR
ALREKQPELQISARDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPNVKWTHEQGSVMM
FEHLINSNGLKAVMEYYGLIPEEDICFIKELITGPLESPIKDSSWPYKGRPKEKSFLYEI
VANKRNGIDVDKWDYFARDCHHLGIQNNFDYQRFIKFARVCEVDNRKRICTRDKEVGNLY
DMFHTRNSLHRRAYQHKVGNIIDTMITDAFLKADPYIEITGAEGKKYHISTAIDDMEAFS
KLTDNIFLEILYSSDPKLDAAREILRKIEYRNLYKYVGETKPKGKTKIEREDYKCLPEEI
ATAKPSDILLEAELKAEDLIVDVINMDYGMEDENPIDHVRFYCKSDLSKPVKITKDQVSE
LLPERFAEQLIRVYCKKTDAKSLFAAQQHFVQWCLSRDFTKPQDGDVVAPLITPRKVEWN
NENSAQSPDHFREMPKFRLRLFQDDSV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcagggagcggactcggatcagcccttcaagcggccccgatgcgatagcagcccccaa
accccgccaaacatccgttccgcggcggcggagaggtccccaggccccgaactccgccca
aatcaccagacctggggcccggagcaggtgtgctgcttcctaaagcgcagtggcttcagt
gatccccgactgctggaccgcttccgagaaaataaaatcacaggtttaacactgctgcat
cttaatgagtctgatcttgaaagtcttgggataagtaccttgggcgacagaaagaagctg
cataattatatccaacaactgagtgaaattcatgttgattcaatgaaggtaattaatgat
cctatccatggccacattgaactccacccactcctcatccgaatcatcgacacacctcag
tttcagcggcttcgatatatcaaacagctgggaggcagttactacatttttccaggtgct
tcgcacaatcgatttgagcacagtctaggtgtagggtatctagcaggatgtctggttcgt
gcactgcgtgaaaaacagccagagctgcagataagtgcacgagatgtgctctgtgttcag
attgctggcctttgtcatgatctcggtcatgggccattttctcatatgtttgatggaaga
tttattccactggctcgcccaaatgtgaaatggacgcatgaacagggctcagtgatgatg
tttgagcacctaattaattctaatggactcaaagcggtcatggaatactatggtctcatc
cctgaagaagacatttgctttatcaaggaactaattacaggaccacttgaatcaccaatc
aaagattcttcgtggccatataaagggcgtcctaaagagaaaagcttcctttatgagata
gtggccaacaaaagaaacggcatcgatgtggacaaatgggattattttgccagggactgc
catcatcttggaatccaaaataattttgattaccagcgctttattaaatttgcccgtgtc
tgtgaagtagataataggaagcgtatttgtactagagataaggaggttgggaatctgtat
gacatgttccatactcgcaactctttgcaccgcagagcttatcaacacaaagttggcaac
atcattgataccatgattacagatgctttcctcaaagcagacccctacatagagattaca
ggtgctgaaggaaaaaagtatcacatttctacagcgattgatgacatggaagccttcagt
aagctaacagataacatttttctggagattttatattcttctgatcctaaactggatgca
gcacgagagattttaagaaaaattgaataccgtaatctatacaagtatgtgggtgagact
aagccaaagggaaaaacaaaaattgaaagggaagactataaatgccttccagaagaaatt
gccaccgctaaacctagtgatatattgctggaagctgagctgaaggctgaagatttaata
gtggatgttatcaacatggattatggaatggaagatgagaatcctattgatcatgttcgc
ttctattgtaagagtgacctcagcaaaccagtcaagattactaaagaccaggtttcagag
cttttgccagagagatttgcagagcagctcattcgcgtgtactgtaagaagactgatgca
aaaagcttgtttgccgcacaacagcattttgttcagtggtgcttaagcagagacttcacc
aagccgcaggatggtgatgttgtagcccctcttataacacctcggaaagtggagtggaat
aacgagaactcagcccagagcccagatcacttccgggaaatgcccaaatttagactccgg
ctctttcaggatgactcagtgtga
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