| Entry |
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| Symbol |
DDX1
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| Name |
(RefSeq) ATP-dependent RNA helicase DDX1
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| KO |
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| Organism |
aml Ailuropoda melanoleuca (giant panda)
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| Brite |
KEGG Orthology (KO) [BR:aml00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:aml03041]
100478593 (DDX1)
03016 Transfer RNA biogenesis [BR:aml03016]
100478593 (DDX1)
Enzymes [BR:aml01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100478593 (DDX1)
Spliceosome [BR:aml03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100478593 (DDX1)
Transfer RNA biogenesis [BR:aml03016]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
100478593 (DDX1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:complement(132991022..133026345)
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| AA seq |
740 aa
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKASDSYVVKSQHSGNAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPRTDRLWERLGKNHIRTDDVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF |
|---|
| NT seq |
2223 nt +upstreamnt +downstreamnt
atggcggccttttctgagatgggtgttatgcctgagattgctcaagccgtagaggagatg
gattggcttctcccaactgatatccaggctgaatctatcccattgatcctaggaggcggt
gatgtacttatggctgcagaaacaggaagtggaaaaactggtgctttcagtattccagtt
atccagatagtttatgagactctgaaagaccaacaggaaggcaaaaaaggaaaaacaaca
attaaaactggtgcttcagtgctcaacaaatggcagatgaacccatatgatagaggatct
gcttttgcaattgggtcggatggtctttgttgtcaaagcagagaagtgaaggagtggcat
ggatgcagagctactaaaggattaacgaaagggaagcactactatgaagtatcctgtcat
gaccaaggattatgcagagttgggtggtcttccatgcaggcttccttagacctaggtact
gacaagttcggctttggctttggtggaacaggaaagaaatcccataataaacaatttgat
aattatggagaggaattcactatgcatgataccattggatgttaccttgatatagataaa
gggcatgtcaaattctccaaaaatggaaaagaccttggtctggcatttgaaataccacca
catatgaagaaccaagccctctttcctgcttgtgttttgaagaatgccgaactaaaattt
aacttcggtgaagaagaatttaagtttccaccaaaagatggttttgttgctctttccaag
gcatcggatagttatgttgttaaatcacagcactcaggtaatgcgcaggtggcacaaaca
aagtttctccccaatgctccgaaagctctcatcgtcgagccctcccgagagttagctgaa
cagactttgaataacgtcaagcaatttaagaaatacattgataatcctaaattaagggag
cttctgataattggaggtgttgcagcgcgggatcagctctctgttttggataatggggta
gatatagtcgttggcactccaggaagactagatgatttggtgtcaactggaaagctgaac
ttatcccaagttcgattcctggtcctggatgaagctgatggacttctttctcaaggttac
tccgattttataaataggattcacaatcagattcctcagattacctctgatgggaaaaga
cttcaggtgattgtttgctctgctactttgcattcttttgatgtgaagaagctgtctgag
aaaataatgcattttcccacatgggttgatttaaaaggagaagactccgttccggacact
gtacaccatgttgttgtcccagtgaatcccagaactgacagactctgggaaaggcttggg
aaaaaccacattagaaccgatgatgtacatgcaaaggataacacaaggcctggtgctaat
agtccagagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgggca
atcaaggaacacaagatggatcaagcaattattttctgtagaaccaaaattgactgtgat
aacttggagcaatattttatgcaacaaggaggaggacctgataaaaaaggacaccagttc
tcatgtgtttgtcttcatggggacagaaagcctcatgaaaggaagcaaaacttggaaaga
tttaagaaaggagatgtacgattcttgatttgcacagatgtagccgccagaggaattgac
atccatggtgttccttatgtcataaatgtcaccttgcctgatgaaaagcaaaactatgta
catcgaattggcagagttggaagagctgaaaggatgggtctggccatttccctggtggca
acagagaaagaaaaggtttggtaccatgtgtgtagcagccgtggaaaaggatgttataac
acaagactcaaggaagatggcggctgtaccatctggtacaatgagatgcagttgctgtct
gagatagaagagcatctgaattgcaccatttctcaggtcgaaccagatataaaggtacca
gtggatgaatttgatgggaaagtcacctatggtcagaaaagggctgctggtggtggaaac
tataaaggccatgtggatattttggcacctacggttcaagagttggctgcccttgaaaag
gaggcgcagacatctttcctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga |
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