Ailuropoda melanoleuca (giant panda): 100478625
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Entry
100478625 CDS
T01329
Symbol
DDX53
Name
(RefSeq) DEAD box protein 53
KO
K21869
ATP-dependent RNA helicase DDX53 [EC:
5.6.2.7
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100478625 (DDX53)
Enzymes [BR:
aml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100478625 (DDX53)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
100478625 (DDX53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
MOEP19
KH_2
KH-I_KHDC4-BBP
HEM4
KH_5
Motif
Other DBs
NCBI-GeneID:
100478625
NCBI-ProteinID:
XP_002929955
LinkDB
All DBs
Position
X:19218864..19220807
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AA seq
625 aa
AA seq
DB search
MAWAPEQKRAEPNPRDFRAGRDGRGGGGWSAPSGSMELRASGPREPPLCFRLRSNMIGVV
IGRGGSKIKDIQAMTNTKIQIIKGDSEAEVKIFGATDMKAKAKAAIDALVKKQERGHHSE
SRVDSATPQASAGREFRPDNTGGRQVQSLIDWDQIRAEVVEWEKRKWAYLPPIKKNFYVE
SEATSSLSQVQVDMWRKENFDLICDDLKDGEKRPIPNPTRLFEDAFHPYPELIESIKRAG
FQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHLNNQPISREERNGPGMLV
LTPTRELALQVEAECSKYSYKGLKSICIFGGRNREQQIRDITKGIDIIIATPGRLNYLQM
NNFVNLQSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQTVMISATWSDTIHQLGQSY
LKEPMIVYVGTLDLVAVNTVTQNVIITTQEEKRSLLQEFLQNRSPQDKVIVFVRRRLVAD
DLSSDLSIQGITVQSLHGDRDQHDRERALEDFRSGKVKVLIATDLASRGLDVNDITHVYN
YDFPRNIEEYVHRVGRTGRAGKTGLSITLMTQNDWKIATELIKILKRANQSVPEDLLTMA
EQYKLHKQKKDTGKRKSQGKSREFY
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcctgggccccagaacagaaaagggcagagcctaatccaagagatttcagggccggc
cgggatggcaggggtggtggcggctggagcgctccctccggctccatggagcttagagcc
tcaggccccagagaaccacctctctgctttagactgaggagcaatatgattggtgtggtg
attggtcgtggtggatcaaagataaaagacatccaggctatgacaaacaccaaaatacag
atcataaaaggtgattctgaagcagaggtaaaaatttttggcgccacggacatgaaagca
aaggccaaagcagctatagatgctcttgttaaaaaacaagaacgaggccaccattcagag
tcccgtgtggatagtgccacacctcaggcctctgctggaagagagtttcgcccagataac
actggcggtaggcaagttcagtcactgatagattgggatcaaattagggcagaagttgta
gagtgggaaaaaagaaaatgggcatatttaccaccaattaagaaaaacttttacgtagaa
tctgaagcaaccagctcattgtctcaagttcaggtagacatgtggagaaaggaaaatttt
gacctaatatgtgacgacttgaaagatggtgaaaagcgccccatccccaatcctactcgt
ctgtttgaggatgctttccatccttatcctgaacttattgaaagcattaaaagagcaggt
tttcaaaagccaacgccaattcagtcacaggcgtggccaattattctacaaggaatagat
cttataggagttgcgcaaaccggaacgggcaaaactttgtcctatttaatgcctgggttt
atccacctcaataatcaaccaatatccagagaggaaaggaatggacctggcatgctagtc
cttacacccactagagaattagctcttcaggtggaagctgaatgttctaagtattcatat
aaaggtcttaaaagtatttgtatatttggtggcagaaatagagaacaacaaatacgagac
attaccaaaggcatagatatcattattgcaactcctggacgactaaattatctgcaaatg
aataactttgtcaacttacaaagcataacctacttagtcttagatgaagcagataaaatg
ctagatctggggtttgaacaccagataatgaagattttattagatgtgcgcccagaccgc
cagactgttatgataagtgcaacttggtcagataccattcatcagcttggtcagtcttat
ttgaaagagcctatgattgtttatgttggtactctggatctagttgctgttaatactgtg
acgcaaaatgtgatcattaccacacaagaagaaaaacgatctcttctccaagaattcctg
cagaaccgttcaccccaagacaaagtcatcgtgtttgtcagaagaagacttgttgctgat
gacttatcaagtgatttgagcatccaaggcataacagtgcagtcactacatggcgacaga
gaccagcatgatcgtgaacgagcattggaggacttcagaagtggaaaagtgaaagtactg
attgctactgatttagcatccagaggtcttgatgttaatgatatcacacacgtatataat
tacgacttcccgcgcaatattgaagaatatgtacacagagtggggcgaactggaagagca
gggaagactggtttatcaattaccctcatgactcaaaatgattggaagatcgccactgaa
ttgattaaaattctgaaacgagcaaatcagagtgtccctgaagatcttctaacaatggcc
gagcaatacaaattgcataaacaaaaaaaggacacaggaaaaagaaaatctcaaggaaaa
tccagggagttttattga
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