Ailuropoda melanoleuca (giant panda): 100478643
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Entry
100478643 CDS
T01329
Symbol
SART1
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100478643 (SART1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aml03041
]
100478643 (SART1)
04121 Ubiquitin system [BR:
aml04121
]
100478643 (SART1)
Spliceosome [BR:
aml03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
100478643 (SART1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
100478643 (SART1)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100478643 (SART1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
100478643
NCBI-ProteinID:
XP_034500730
LinkDB
All DBs
Position
16:84592961..84616702
Genome browser
AA seq
1081 aa
AA seq
DB search
MGSSKKHRGEKEAAGTTAAASTGGATEQPPRHREHKKHKHRSGGGGSSGGERRKRSRERG
GERGGGRRGAEAEARAASSKASPADASSLSIEETNKLRAKLGLKPLEVNAIKKGECGAED
WEAGTKEEPVAADVINPMALRQREELREKLAAAKEKRLLNQKLGKIKTLGEDDPWLDDTA
AWIERSRQLQKEKDLAEKRARLLEEMDQEFGVSTLVEEEFGQRRQDLYSARDLQGLTVEH
AIDSFREGETVILTLKDKGVLQEGEDVLVNVNLVDKERAEKNVELRKKKPDYLPYAEDES
QKPRSILSKYDEELEGERPHSFRLEQGGAADGLRERELEEIRAKLRLQAQSLSTAGPRLA
SEYLTPEEMLFADAMLLIPAASSKASPADASSLSIEETNKLRAKLGLKPLEVNAIKKEAG
TKEEPVAADVINPMALRQREELREKLAAAKEKRLLNQKLGKIKTLGEDDPWLDDTAAWIE
RSRQLQKEKDLAEKRARLLEEMDQEFGVSTLVEEEFGQRRQDLYSARDLQGLTVEHAIDS
FREGETVILTLKDKGVLQEGEDVLVNVNLVDKERAEKNVELRKKKPDYLPYAEDESVDDL
AQQKPRSILSKYDEELEGERPHSFRLEQGGAADGLRERELEEIRAKLRLQAQSLSTAGPR
LASEYLTPEEMVTFKKTKRRVKKIRKKEKEVVVRADDLLPLGDQTQDGDFGSRLRGRGRR
RVPEADEEAPEEEEKEPVPQPLQSDDTRVENMDISDDEEGGAAQSGSPEVLEEDEAELEL
QKQLEKGRRLRQLQQLQQLRDSGEKVVEIVKKLESRQRGWEEDEDPERKGAIVFNATSEF
CRTLGEIPTYGLAGNREEQEELMDFERDEERSANGGSESDGEENIGWSTVNLDEEKQQQD
FSASSTTILDEEPIVNRGLAAALLLCQNKGLLETTVQKVARVKAPNKSLPSAVYCIEDKM
AIDDKYSRREEYRGFTQDFKEKDGYKPDVKIEYVDETGRKLTPKEAFRQLSHRFHGKGSG
KMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQEKQKAQKTPYIVLSGSGKSMNANTIT
K
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgtcaaagaagcaccgcggggagaaggaggcggccgggacgacggcggcggcc
agcactggaggcgccaccgagcagccgccgcggcaccgggagcacaaaaaacacaagcac
cggagcggcggcggcggcagcagcggcggcgaacgtcggaagcggagccgggagcgtggg
ggcgagcgtggcggcgggcggcgcggggccgaagccgaggcccgcgccgccagctccaaa
gctagcccagcagatgcctcgtcgcttagcatcgaggagaccaataaactccgggcaaag
ttggggctgaaacccttggaggtcaatgccatcaagaagggtgagtgtggggctgaggat
tgggaggcgggcaccaaggaggagcccgtggcagccgatgtcatcaaccccatggccttg
agacagcgagaggagctacgggagaagctggcagccgccaaagaaaagcgcctcctgaac
caaaaactgggaaagataaagacactgggggaggatgacccctggctggatgacacggca
gcctggatcgagaggagccggcagcttcagaaggagaaggacttggcagagaagagggcc
agactgctggaggagatggaccaagagtttggggtcagcactttggtggaagaggagttt
gggcagaggcggcaggacctgtacagtgcccgggacctacagggcctcaccgtggaacat
gctattgattccttccgagaaggggagactgtgatcctcaccctcaaggacaaaggtgtg
ctgcaggagggggaggacgtgctggtgaacgtgaacctcgtggataaagagcgggcagag
aagaacgtagagctccggaaaaagaagcctgactacctgccctatgcagaggatgagagc
caaaaaccccgctctatcctgtccaagtatgatgaggagctcgagggcgagcggccgcac
tcgttccgcttggagcagggtggcgccgctgacggcctgcgggagcgggagctggaggag
atccgggccaagttgcggctgcaggctcagtccctgagcacagcggggccccggctggcc
tccgagtacctcacgcccgaggagatgctatttgctgatgccatgcttcttattccagcc
gccagctccaaagctagcccagcagatgcctcgtcgctcagcatcgaggagaccaataaa
ctccgggcaaagttggggctgaaacccttggaggtcaatgccatcaagaaggaggcgggc
accaaggaggagcccgtggcagccgatgtcatcaaccccatggccttgagacagcgagag
gagctacgggagaagctggcagccgccaaagaaaagcgcctcctgaaccaaaaactggga
aagataaagacactgggggaggatgacccctggctggatgacacggcagcctggatcgag
aggagccggcagcttcagaaggagaaggacttggcagagaagagggccagactgctggag
gagatggaccaagagtttggggtcagcactttggtggaagaggagtttgggcagaggcgg
caggacctgtacagtgcccgggacctacagggcctcaccgtggaacatgctattgattcc
ttccgagaaggggagactgtgatcctcaccctcaaggacaaaggtgtgctgcaggagggg
gaggacgtgctggtgaacgtgaacctcgtggataaagagcgggcagagaagaacgtagag
ctccggaaaaagaagcctgactacctgccctatgcagaggatgagagcgtggatgacttg
gcacagcaaaaaccccgctctatcctgtccaagtatgatgaggagctcgagggcgagcgg
ccgcactcgttccgcttggagcagggtggcgccgctgacggcctgcgggagcgggagctg
gaggagatccgggccaagttgcggctgcaggctcagtccctgagcacagcggggccccgg
ctggcctccgagtacctcacgcccgaggagatggtgacctttaaaaagaccaaacggagg
gtgaagaagatccgcaagaaagagaaggaggtggtagtgcgggccgatgacttgctgcct
cttggagaccagactcaggatggggacttcggttctagactgcggggccggggtcgacgc
cgagtgcccgaggcggacgaggaggccccagaggaggaggagaaggagccggtgcctcag
cccctgcagtcagatgacacccgtgtggagaacatggacatcagcgatgacgaggagggt
ggagccgcccagtccgggtccccagaggtgctggaggaggacgaggcggagctggagctg
cagaagcagctggagaaggggcgccgcctgcggcagctgcaacagctccagcagctgcgg
gacagcggcgagaaggtggtggagattgtgaagaagctggaatctcgccagcggggctgg
gaggaggacgaggatccagagcggaagggggccatcgtgttcaacgccacatcggagttc
tgccgcaccttgggcgagatccccacctacgggctggccggcaaccgggaggagcaggag
gagctcatggactttgaacgagacgaggagcgctcggccaacggcggttcggagtctgat
ggggaggagaacattggctggagcacggtcaacttggacgaggagaagcagcagcaggat
ttctctgcctcatccaccaccatcctggacgaggagcccattgtgaacagagggctggca
gccgccctgctgctgtgtcagaacaaagggctgctggagaccacggtgcagaaggtggcc
cgggtgaaggcgcccaacaagtccctgccgtcagctgtgtactgcatcgaggacaagatg
gccatcgatgacaagtacagccggcgggaggagtatcgaggattcacccaggacttcaag
gagaaggacggctacaaacccgacgtgaagatcgagtacgtggatgagacgggccggaaa
ctcacacccaaggaggctttccggcagctgtcccaccgcttccacgggaaaggctcgggc
aagatgaagacggagcggcggatgaagaagctggacgaggaggcgctcctgaagaagatg
agctccagcgacacccccctgggcacagtggctctgctccaggagaagcagaaggcccag
aagacgccgtacattgtgctcagcggcagtggcaagagcatgaacgcgaacactatcacc
aagtga
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