Ailuropoda melanoleuca (giant panda): 100478712
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Entry
100478712 CDS
T01329
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100478712 (TRERF1)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
100478712 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
Myb_DNA-bind_7
zf-met
zf-C2H2_2
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
100478712
NCBI-ProteinID:
XP_034503919
Ensembl:
ENSAMEG00000023645
LinkDB
All DBs
Position
19:complement(1098641..1320090)
Genome browser
AA seq
1300 aa
AA seq
DB search
MPTGTSGCSHVHRHVSRGIVWTPSLSFSGFQSFWVCFIDLFLWFCGWTFTAKAGAMGDQQ
LYKTNHVAHSGENLFYQQPPLGIHGGLNHNYGNTVTGAGMDAPQASPISPHFPQDTRDGL
GLPVGSKNLGQVDTSRQGGWGGHTGPGNHVQLRGNLTNSNMMWGTPAQPEPADGYQYTYS
QASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGAPDSALRQLL
SQKPMEPPAPALPARYQQVAQQAHPGFPGGLSKPALQVGPHASQGHLYYDYQQPLAQMPV
QGGQPLQAPQMLSQHVQQMQQHQYYPQQQQQQQQAGQQPVSLQEMQQQQPQQTRPPQQQQ
QQPQQLQQRQGPMQIPQYYQPQPVMQHLQEQPSQMHLQPPSYHRDPHQYGPEQAHAVQLI
QLGSMPQYYYQEPQQPYGHHLCQQSHVPQHQQREDSQPKTYPSDRQAQAMLSSHSDLGPP
DAGMGDPASSDLNRLGGALPHRPLLSPGGIHLNNMGPPHQQLSPSALWPQMHLPDGRAQP
GSPESSSQPKGVFGEQFDAKNKLTCSICLKEFKSLPALNGHMRSHGGMRASPSLKQEEGE
KALPPQPQPQPQPPLPPPPPPQLPPEAESLTPMVMPVSVPVKLLPPKPGSQGFANSIVAA
PSTRDKPASSMSDDEMPVLVRMTLSPPHSPQGAAPHPPAEIPKKHQPGAAKAEEPLKSLP
EKKKFRHRPEPLFIPPPPSYNANPAASYSGATLYQSQLRSPRVLGDHLLLDPAHELPPYT
PPPMLSPVRQGSGLFSNVLVAGHGPGAHPQLPLTPLTPTPRVLLCRSNSIDGSNVTVTPG
PGEQTIDVEPRINIGLRFQAEIPELQDVSALAQDTHKATLVWKPWPELENHDLQQRVENL
LNLCCSSALPGGGTNSEFALHSLFEAKGDVMAALETLLLRKPVRLKCHPLANYHYAGSDK
WTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRTRLAEID
DSVVSEAAQSLPMRAPPPPHTQTSAEEEELEDEDEDPEEDRKSAREEESEVPKSPEPPPG
PVLAPAEGPPLQALGQPSGSFICEMPNCGADCRCHVTPFLPQVFSSRQALNGHARIHGGT
NQVTKARGAVASGKQKPGSAQSGYCSVKSSPSHSTTSGETDPTTIFPCKECGKVFFKIKS
RNAHMKTHRQQEEQQRQKAQKAAFAAEMAATIERTTGPAGTPGLLPLDQLSLIKPIKDVD
ILDGDVVQQLGGVMEEAEVVDTDLLLDDQDSVLLQGDAEL
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagggacatctggctgcagccacgttcacagacatgtcagccgtggaatagtg
tggacgccttccctcagcttctcagggtttcagtccttttgggtttgtttcattgacctt
tttttatggttttgtggctggacgttcacggccaaggcaggcgccatgggagatcagcaa
ctgtacaagaccaatcacgtggcccacagtggtgagaaccttttctaccaacagccaccg
cttggcatccatggcgggctgaaccacaactatgggaatacagtcacaggggccgggatg
gatgcccctcaggcgtcacccatctccccccacttccctcaagatactcgggatggtcta
ggcttgcctgttggctccaaaaacctgggccaagtggatacctcgaggcagggagggtgg
ggaggtcataccgggcctggaaaccatgtccagctacgcggcaacctgaccaactcaaac
atgatgtgggggaccccggcccagcctgagcccgctgatggctaccagtatacctactcc
caggccagtgagatccggacccagaaactcaccagcggggtcctgcacaagctagactcc
ttcacccaggtgttcgccaaccaaaacctgcgaattcaggtcaacaatatggcccaggtg
ctgcacacccagtcggcagtgatggatggggcccctgacagtgccctccgccagttgctg
tcccagaagcccatggagcccccggcgccggctctccctgctcgctaccagcaggtggcc
cagcaggctcaccctggtttccctggtgggctgtccaaaccagctctgcaggtagggccg
cacgccagccagggccacctgtattatgactaccagcagccactggctcagatgccggtg
caggggggacagccgctgcaggccccccagatgctgtcccagcacgtgcagcagatgcag
cagcaccagtattacccgcagcagcagcagcagcagcagcaggctggacagcagcctgtg
tccctgcaggaaatgcaacagcagcagccgcagcagacgcgcccgccgcagcagcaacag
cagcagccgcagcagctgcagcagcggcaggggccgatgcagatacctcagtattaccag
ccccagcccgtgatgcagcacctgcaagagcagccgtcgcagatgcacctgcagcccccc
tcttatcacagggacccccaccagtacggcccggagcaggcacacgccgtccagctgatc
cagctgggctccatgccccagtactactaccaggagccccagcagccctacggccaccac
ctctgccagcagagccacgtgccccagcaccagcagcgcgaggacagtcagcccaagact
tacccgagcgacaggcaggcccaggccatgctgagctcccacagcgacctggggcctccc
gatgcaggaatgggagacccggcaagctcggacctgaaccggctcggcggggccctgccc
catcggccgcttctgtcccccggcgggatccaccttaacaacatggggcctccgcaccag
cagctgtctcccagtgccctgtggccccagatgcacctacctgatggcagagcccagcca
gggtcccctgagtcaagtagccaaccaaaaggagtgtttggggagcagtttgatgccaag
aacaaactgacgtgctccatctgcctgaaggaattcaagagcctacctgccctgaatggc
cacatgcggtcccatgggggaatgagagcctcccccagcctcaaacaggaggaaggagag
aaggccctgccgcctcagcctcagcctcagccccagccgccactgccgcctccgccacca
ccgcagctccctcccgaggcagaaagcctcacgcctatggtcatgcccgtgtctgtccct
gtcaagcttctcccgcccaagccaggctctcagggcttcgccaacagcatcgttgccgcc
ccctccaccagagacaagccagccagctcgatgtcggacgacgagatgcccgtgctcgtg
aggatgaccctctctcccccacactcaccccaaggggctgccccccacccgcctgctgag
atccccaagaagcatcagccgggcgcggccaaagccgaggagcccctcaagagcttgccg
gagaagaagaagttccggcaccggcccgagccgctcttcatcccgccaccgccctcctac
aacgccaaccccgccgcctcgtactcgggcgccaccctgtaccagagccagctgcgctcc
ccgcgcgtcctcggcgaccacctgctgctggaccccgcccacgagctgcccccctacacg
cccccgcccatgctgagccccgtgcgccagggctcggggctcttcagcaacgtgctcgtc
gcgggccacggccccggcgcccacccgcagctgcccctcacgccgctgacgcccacgccg
cgggtgctgctgtgccgctccaacagcattgatggcagcaacgtgacagttaccccaggg
cctggagagcagaccattgatgtggaaccacgcatcaacattggcttgaggttccaagca
gagatcccagaacttcaggatgtctctgccttggcccaggacacacacaaggccacactg
gtatggaagccctggccagagctggaaaaccatgacctccagcaaagagtggagaatctc
ctgaatttgtgctgttcaagtgcgttgcccggtggagggaccaattctgaatttgctttg
cactctcttttcgaggccaaaggtgatgtgatggctgctctggaaacgctgctgctgcgg
aagccagtcaggttaaaatgtcatcctttagcaaattaccactatgccggttcggacaag
tggacatccctagaaagaaaactgtttaataaagcactagccacttacagcaaagacttt
atttttgtacagaagatggtgaagtctaagacggtggctcagtgtgtggagtactactac
acgtggaaaaagataatgcgcttggggcggaaacaccggacacgcctcgcagaaatcgat
gattctgtggtgagtgaagctgcgcagtcgctgcctatgcgggccccgcccccgccccac
acccagacgagtgcagaagaggaggagttagaggacgaggacgaggacccggaagaagat
aggaaatccgccagagaagaggagagcgaagtgcccaagtctcccgaaccaccgccaggc
cccgtgttggctcccgcggaggggccaccgctgcaggccctcggccagccctccggctcc
ttcatctgtgagatgcccaactgtggggctgactgtagatgtcatgtcactccctttctt
ccccaggtgttcagctcccgacaggcactgaacggccacgcccgcatccacggtggcacc
aaccaggtgaccaaagcccggggggccgtcgcctccgggaagcagaagccgggcagcgcc
cagagcgggtactgctcagtgaagagctccccctctcacagcaccaccagcggcgagaca
gaccccactaccatcttcccctgcaaggagtgtggcaaagtcttcttcaagatcaagagc
cgaaatgcacacatgaaaacacacaggcagcaggaggaacagcagaggcaaaaggctcag
aaggcggcttttgccgctgagatggccgccaccatcgagaggactacggggcctgcgggg
acgccagggctgctgcccctggaccagctgagcctcatcaaacccatcaaggacgtggac
atcctcgatggcgacgttgtccagcagttgggaggcgtcatggaagaggccgaggtcgtg
gacacggatctcctcttggatgaccaagattcggttttgcttcagggtgacgcggaacta
taa
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