KEGG   Ailuropoda melanoleuca (giant panda): 100478734
Entry
100478734         CDS       T01329                                 
Name
(RefSeq) F-box only protein 42
  KO
K10317  F-box protein 42
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aml04121]
    100478734
Ubiquitin system [BR:aml04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     100478734
SSDB
Motif
Pfam: Kelch_KLHDC2_KLHL20_DRC7 Kelch_3 Kelch_4 Beta-prop_ATRN-LZTR1 Kelch_1 Kelch_5 Kelch_2 Kelch_6 NANM F-box-like F-box F-box_5
Other DBs
NCBI-GeneID: 100478734
NCBI-ProteinID: XP_034527973
Ensembl: ENSAMEG00000011556
LinkDB
Position
11:complement(11725399..11814421)
AA seq 736 aa
MASSSDSEDDSFMAVDQEEAVLEGTMEQDEEPHPALEAEETRHNRSMSELPEEVLEYILS
FLSPYQEHKTAALVCKQWYRLIKGTVDSGKAYLFKICFNDLFLNSQFHFSLSPVNLHMGY
NYGARGASELNISYAFIVFFLGACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEW
IRPLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWN
CIVTTHGPPPMAGHSSCVIDDKMIVFGGSLGSRQMSNDVWVLDLEQWAWSKPNISGPSPH
PRGGQSQIVIDDATILILGGCGGPNALFKDAWLLHMHSGPWAWQPLKVENEDHGAPELWC
HPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRSMDEA
PCVNGRWGTLRPRAQRQTPSSSREGSLSPARGDGSPILNGGNLSPGTAAVGGSSLDSPVQ
AVSPSTPSTTEGYDLKMGLSLAPRRGSLPDQKDLRLGSIDLNWDLKPASSSNHMDGVDNR
TVGGSMRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASAALSPPL
GSSPGSPGSQNLSSGETVPVPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPLYQSMNC
KPMQMYVLDIKDTKEKGRVKWKVFNSSSVVGPPETSLHTVVQGRGELIIFGGLMDKKQNV
KYYPKTNALYFVRAKR
NT seq 2211 nt   +upstreamnt  +downstreamnt
atggccagctcttcggacagtgaagatgacagtttcatggctgtggaccaggaagaagct
gtgctggaagggacaatggagcaggatgaggagccccacccggcgctggaggccgaagag
acgagacataacaggtccatgtctgaactgccagaagaggttttggagtatatcctgtcc
tttctttcaccataccaggagcacaaaactgcagcccttgtctgcaaacagtggtatcga
cttatcaaaggtactgtggacagtggaaaggcttatttatttaaaatatgttttaatgat
ttatttttgaactcccaatttcatttttccctttctcccgtaaatttacatatgggctat
aattatggtgccagaggggcttcagagttaaacatcagctatgcatttattgttttcttt
ctaggtgcatgctattacgatgctaatcagtctatgtatgtgtttggaggctgtacccag
agcagctgcaatgctgccttcaatgacctctggagacttgacctaaatagcaaagagtgg
atccgacctttggcttcaggatcctatccttcccctaaagctggagcaactctggtcgtg
tacaaggacctgctggtgctgttcggtggctggacgcggccaagcccatatcccctacac
caaccagagagattctttgatgaaatacacacttactcaccctctaaaaactggtggaac
tgcattgtgacaacccatgggccacctcccatggctggccattcctcctgtgtgatagat
gacaaaatgattgtctttggtggctccttaggatcccggcaaatgagcaacgatgtctgg
gtccttgaccttgagcagtgggcgtggtccaagccgaacatctccggccccagtcctcat
cctcgaggtggccaatctcagattgtcatagatgatgcaactatcttaatccttggaggc
tgtggcggtccgaatgctctcttcaaggatgcttggttgttgcacatgcactcgggcccc
tgggcctggcagccactcaaggtagaaaacgaagaccatggggcgccagaactgtggtgc
cacccagcttgtcgggtggggcagtgtgtggtggtcttcagccaggctcctagtggaaga
gccccactcagccccagtttgaactcccgcccatcgcctatcagtgccactcctccagct
ttggttcctgaaacccgagagtaccgctctcagtctccagtaaggagtatggatgaagcc
ccttgtgttaacggccgctggggcacactgaggcccagagctcaaaggcagaccccctca
agttcccgggaagggagcctttccccagccagaggagatggctctcccatcctcaatggt
gggaatttgtctccaggaacagcagctgtaggtggctcttccttggacagccctgtgcag
gccgtatctcctagcactccgtctaccactgaaggatatgacctcaaaatgggactttct
ttggccccccgacgagggtcactaccggatcagaaagatctgaggttaggatcaatagat
ctgaattgggatctgaaacccgcttcgagtagcaatcatatggatggtgtggacaacagg
acagttgggggaagcatgcgacaccctcctgaacaaacgaatggtgtgcataccccacca
cacgtggccagtgcccttgcaggagctgtctccccaggtgccctgcgtcggagcctagaa
gccatcaaagcaatgtcgtccaaaggcccctcagcctccgcagcactaagtcctcctctg
gggtcttctccaggctctcccgggagccagaacctgagcagtggagaaacagtgcccgtt
ccccgcccagggcctgcccaaggagatggacattccttacctcccattgcccgccgcctg
ggccaccaccctccgcagtccctaaatgttggcaaacctttgtaccagagtatgaactgc
aagcccatgcagatgtatgtgctagacattaaggacaccaaggagaaggggcgggtcaaa
tggaaagtatttaatagcagttctgtggtcggacctcctgaaaccagcctgcatacagtg
gtccaaggcaggggtgaactcatcatatttggaggactcatggacaagaaacagaatgtg
aagtactatccaaaaacaaacgccttgtactttgtgcgagcaaagagataa

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