Ailuropoda melanoleuca (giant panda): 100478734
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Entry
100478734 CDS
T01329
Name
(RefSeq) F-box only protein 42
KO
K10317
F-box protein 42
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100478734
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100478734
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_3
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_5
Kelch_2
Kelch_6
NANM
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
100478734
NCBI-ProteinID:
XP_034527973
Ensembl:
ENSAMEG00000011556
LinkDB
All DBs
Position
11:complement(11725399..11814421)
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AA seq
736 aa
AA seq
DB search
MASSSDSEDDSFMAVDQEEAVLEGTMEQDEEPHPALEAEETRHNRSMSELPEEVLEYILS
FLSPYQEHKTAALVCKQWYRLIKGTVDSGKAYLFKICFNDLFLNSQFHFSLSPVNLHMGY
NYGARGASELNISYAFIVFFLGACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEW
IRPLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWN
CIVTTHGPPPMAGHSSCVIDDKMIVFGGSLGSRQMSNDVWVLDLEQWAWSKPNISGPSPH
PRGGQSQIVIDDATILILGGCGGPNALFKDAWLLHMHSGPWAWQPLKVENEDHGAPELWC
HPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRSMDEA
PCVNGRWGTLRPRAQRQTPSSSREGSLSPARGDGSPILNGGNLSPGTAAVGGSSLDSPVQ
AVSPSTPSTTEGYDLKMGLSLAPRRGSLPDQKDLRLGSIDLNWDLKPASSSNHMDGVDNR
TVGGSMRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASAALSPPL
GSSPGSPGSQNLSSGETVPVPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPLYQSMNC
KPMQMYVLDIKDTKEKGRVKWKVFNSSSVVGPPETSLHTVVQGRGELIIFGGLMDKKQNV
KYYPKTNALYFVRAKR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcttcggacagtgaagatgacagtttcatggctgtggaccaggaagaagct
gtgctggaagggacaatggagcaggatgaggagccccacccggcgctggaggccgaagag
acgagacataacaggtccatgtctgaactgccagaagaggttttggagtatatcctgtcc
tttctttcaccataccaggagcacaaaactgcagcccttgtctgcaaacagtggtatcga
cttatcaaaggtactgtggacagtggaaaggcttatttatttaaaatatgttttaatgat
ttatttttgaactcccaatttcatttttccctttctcccgtaaatttacatatgggctat
aattatggtgccagaggggcttcagagttaaacatcagctatgcatttattgttttcttt
ctaggtgcatgctattacgatgctaatcagtctatgtatgtgtttggaggctgtacccag
agcagctgcaatgctgccttcaatgacctctggagacttgacctaaatagcaaagagtgg
atccgacctttggcttcaggatcctatccttcccctaaagctggagcaactctggtcgtg
tacaaggacctgctggtgctgttcggtggctggacgcggccaagcccatatcccctacac
caaccagagagattctttgatgaaatacacacttactcaccctctaaaaactggtggaac
tgcattgtgacaacccatgggccacctcccatggctggccattcctcctgtgtgatagat
gacaaaatgattgtctttggtggctccttaggatcccggcaaatgagcaacgatgtctgg
gtccttgaccttgagcagtgggcgtggtccaagccgaacatctccggccccagtcctcat
cctcgaggtggccaatctcagattgtcatagatgatgcaactatcttaatccttggaggc
tgtggcggtccgaatgctctcttcaaggatgcttggttgttgcacatgcactcgggcccc
tgggcctggcagccactcaaggtagaaaacgaagaccatggggcgccagaactgtggtgc
cacccagcttgtcgggtggggcagtgtgtggtggtcttcagccaggctcctagtggaaga
gccccactcagccccagtttgaactcccgcccatcgcctatcagtgccactcctccagct
ttggttcctgaaacccgagagtaccgctctcagtctccagtaaggagtatggatgaagcc
ccttgtgttaacggccgctggggcacactgaggcccagagctcaaaggcagaccccctca
agttcccgggaagggagcctttccccagccagaggagatggctctcccatcctcaatggt
gggaatttgtctccaggaacagcagctgtaggtggctcttccttggacagccctgtgcag
gccgtatctcctagcactccgtctaccactgaaggatatgacctcaaaatgggactttct
ttggccccccgacgagggtcactaccggatcagaaagatctgaggttaggatcaatagat
ctgaattgggatctgaaacccgcttcgagtagcaatcatatggatggtgtggacaacagg
acagttgggggaagcatgcgacaccctcctgaacaaacgaatggtgtgcataccccacca
cacgtggccagtgcccttgcaggagctgtctccccaggtgccctgcgtcggagcctagaa
gccatcaaagcaatgtcgtccaaaggcccctcagcctccgcagcactaagtcctcctctg
gggtcttctccaggctctcccgggagccagaacctgagcagtggagaaacagtgcccgtt
ccccgcccagggcctgcccaaggagatggacattccttacctcccattgcccgccgcctg
ggccaccaccctccgcagtccctaaatgttggcaaacctttgtaccagagtatgaactgc
aagcccatgcagatgtatgtgctagacattaaggacaccaaggagaaggggcgggtcaaa
tggaaagtatttaatagcagttctgtggtcggacctcctgaaaccagcctgcatacagtg
gtccaaggcaggggtgaactcatcatatttggaggactcatggacaagaaacagaatgtg
aagtactatccaaaaacaaacgccttgtactttgtgcgagcaaagagataa
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