Ailuropoda melanoleuca (giant panda): 100478752
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Entry
100478752 CDS
T01329
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain isoform X4
KO
K06237
collagen type IV alpha
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04151
PI3K-Akt signaling pathway
aml04382
Cornified envelope formation
aml04510
Focal adhesion
aml04512
ECM-receptor interaction
aml04518
Integrin signaling
aml04820
Cytoskeleton in muscle cells
aml04926
Relaxin signaling pathway
aml04933
AGE-RAGE signaling pathway in diabetic complications
aml04974
Protein digestion and absorption
aml05146
Amoebiasis
aml05165
Human papillomavirus infection
aml05200
Pathways in cancer
aml05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100478752 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100478752 (COL4A1)
04518 Integrin signaling
100478752 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100478752 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100478752 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100478752 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
100478752 (COL4A1)
09158 Development and regeneration
04382 Cornified envelope formation
100478752 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100478752 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
100478752 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100478752 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
100478752 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100478752 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aml04147
]
100478752 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
aml00536
]
100478752 (COL4A1)
Exosome [BR:
aml04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100478752 (COL4A1)
Glycosaminoglycan binding proteins [BR:
aml00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100478752 (COL4A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100478752
NCBI-ProteinID:
XP_019660845
Ensembl:
ENSAMEG00000016642
LinkDB
All DBs
Position
7
Genome browser
AA seq
1643 aa
AA seq
DB search
MDGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVIGFPGMQGPEGPHGPPGQKGDTGEPGL
PGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPPGIPGCNGTKGEPGPLGPPGLPGFAGN
PGPPGLPGMKGDPGEIIGHVPGTLLKGERGFPGPPGTPGSPGLPGLQGPVGPPGFTGPPG
PPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPPGVPGQAQVQEKGDFATKGEKGQKGEP
GFQGMPGLGEKGEPGKPGPRGKPGKDGEKGEKGSPGFPGDAGYPGLPGREGFKGDKGEAG
PPGPPGIAIGPGPSGEKGERGYPGAPGLRGEPGPKGFPGLQGQPGPPGFPVPGQAGAPGF
PGERGEKGDQGFPGTSLPGPSGRDGLPGPPGPPGPPGQPGHTNGIVECQPGPPGDQGPPG
IPGQPGLTGEVGEKGQKGESCLICDTSGLRGPPGPQGPPGEIGFPGQPGAKGDRGLPGRD
GLEGLPGPQGSPGLMGQPGAKGEPGEIYFDAQLKGDKGDPGFPGQPGMPGRAGSPGRDGH
PGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDIGPPGPPGFGPIGPVGDKGQAGFPGTP
GSPGQPGPKGEAGKVVPLPGPPGTQGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGTIGQ
PGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNGLPGNPGVPGQKGEPGVGLPGLKGLPG
LTGAPGTPGEKGNIGGPGVPGEHGAIGPPGLQGIRGDPGPPGLQGPKGAPGAPGIGPPGA
MGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPGPKGDKGSQGLPGLTGQSGHPGLPGQQ
GTPGVPGFPGPKGEMGVMGTPGQPGSPGPAGLPGLPGEKGDHGFPGSSGPRGDPGFKGDK
GDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQAGHP
GQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGIPGLQGEKGAK
GEKGQAGLPGTGIPGRPGDKGDQGIAGFPGSPGEKGEKGSAGIPGVPGSPGPKGSPGTVG
YPGSPGLPGEKGDKGLPGSDGIPGIKGEAGLPGKPGPTGPAGQKGEPGSDGIPGSAGEKG
EPGLPGRGFPGFPGAKGEKGSKGDVGFPGQAGSPGIPGSKGEQGFMGPPGPQGQPGLPGA
PGHAVEGPKGDRGPQGQPGLPGLPGPMGPPGLPGLDGLKGDKGNPGWPGAPGAPGPKGEP
GFQGLPGIGGSPGITGSKGDMGPPGVPGFQGQKGLPGLQGTKGDQGDQGFPGSKGLPGPP
GPPGPYDIIKGEPGLPGPEGPAGLKGLPGPPGPKGQQGVTGSVGLPGPPGSPGFDGAPGQ
KGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTPSVDHGFLVTRHSQTTDDPQCPPGTKI
LYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMPFLFCNINNVCNFASRNDYSYWLSTP
EPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAVHSQTIQIPQCPSGWSSLWIGYSFVMH
TSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANAYSFWLATIERSEMFKKPT
PSTLKAGELRTHVSRCQVCMRRT
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggacggtggttgtgctggctctggctgtgggaagtgtgactgccatggagtgaaggga
cagaagggcgagagaggcctcccagggttgcaaggtgtcatcgggtttcccgggatgcaa
ggacccgaggggccccatgggccaccaggacaaaagggtgacactggagaacccgggctg
cctggaacgaaggggacaagaggacccccaggagcatcgggttaccctggaaacccagga
ctgcctggtattcctggccaagacggtccccccggtcctccaggtatccccggatgcaat
ggaacaaagggtgagccagggcctctggggcccccgggtttacctggattcgctggaaat
cccggaccgccaggattaccaggaatgaagggggatccaggtgaaatcattggccatgtg
cctgggaccctgttgaaaggtgaaagaggatttcctggacccccaggaacaccaggctcg
ccgggactgccaggcctgcaaggtcctgttggccctccaggatttaccggaccaccgggt
cctccaggccctcctggccctccaggtgaaaaggggcaaatgggcttaagttttcaaggg
ccaaaaggcgacaagggtgaccaaggcgtcagtgggcctcccggagtgccaggacaagct
caagttcaagagaaaggagactttgccactaaaggagagaagggtcaaaaaggtgaacct
ggatttcagggaatgccggggctcggagagaaaggggagcccggaaaaccagggccccga
ggaaaacctggaaaagatggtgaaaaaggagagaaagggagtccaggctttccaggtgat
gcggggtacccgggactgccaggccgcgaaggtttcaagggagacaaaggtgaagcaggt
cctccaggtccacctggaattgcgatcggcccaggaccctctggagaaaaaggagagcgg
gggtacccgggagccccaggattgagaggagagccaggccccaaaggtttcccaggatta
caaggccagccaggccctccaggctttccagtaccagggcaggctggtgctcctggcttc
cctggtgaaagaggcgagaaaggtgaccaagggtttccaggcacgtctttgccaggacca
agtggaagggatgggctccctggcccccctgggcctcctgggccccctggacagccgggc
cacacgaatggaattgtggaatgccagcctggaccgccaggggatcagggtccccccgga
atcccggggcagccagggttgacgggagaggttggagaaaaaggtcagaaaggcgagagc
tgcctcatctgtgacacatcgggattgcgtgggcctccagggccgcagggccccccggga
gaaataggtttcccaggacagccaggggccaagggcgacagaggcttacctggcagagat
ggtctggaaggattgcctggcccgcaaggctcaccagggctgatgggccagccaggagcc
aagggagagcctggtgagatttacttcgacgcacagctcaaaggagacaaaggagaccca
ggctttccaggacagcccgggatgccaggcagagcagggtctcctgggagagatggccat
ccgggtctgcccggccccaaaggctccccgggttcagtaggattgaaaggagagcgtgga
ccccccgggggagttggattccctggcagtcgcggtgacatcggccctcctgggcctcca
gggtttggccctattggccccgttggtgacaaaggacaagcgggttttccagggacccct
gggtccccaggccagccaggtcccaagggtgaagcaggaaaagttgtgcccttacctggt
ccccctggaacacaaggacttccgggatccccaggtttcccggggccgcaaggtgaccga
ggttttcctggaaccccaggaaggccaggcctgccaggagagaagggcactattggccag
cccggaatcggatttccagggccccctggccccaaaggtgttgatggcttacccggagac
gtgggacctcctggcagtccaggccgcccgggatttaacggcttacctggcaacccaggt
gtgcccggccaaaagggagagcccggagttggtctaccaggactcaaaggattgccaggt
cttaccggcgctcctggcacacctggggagaaggggaacatcgggggaccaggtgttccg
ggagagcatggtgctattggccccccaggccttcagggaatcagaggtgacccaggaccg
cctggattacaaggtcccaaaggagctccaggagctcctggaattgggccccccggagcg
atgggcccccctggaggacagggaccacctgggtcctcaggcccccccggagtgaaagga
gagaagggcttccccggatttccaggcctggacatgccaggtcccaaaggagataaaggg
tcccaagggctgcccggcctgacgggacagtcggggcaccctggtcttcctggacagcag
ggcacacctggggttcctgggtttccaggtcccaagggagagatgggcgtcatggggacc
ccggggcagcctggctcaccgggaccagcgggcctgccaggattaccaggagaaaaaggg
gaccacggcttcccgggctcctcagggcccaggggagaccctggcttcaagggggacaaa
ggagacgtgggtctccctggcaagcctggctccatggataaggtggacatgggcagcatg
aagggtcagaagggagaccaaggagagaaaggacaaattggaccgactggtgataaagga
tcccggggagatcctggaactccaggagtgcctggaaaggatggccaggcaggacatcct
gggcagccaggacctaaaggtgacccaggcataggtggaaccccgggtgccccaggactc
cctggacccaaaggatcggttggtggaatgggcctgccaggaacacctggagaaaaaggt
gtgcctggaatccccggcccgcagggcatccctggcttacagggggagaaaggagcaaaa
ggagagaaagggcaggcgggcctacctggcactggaattccaggccgtcccggggacaag
ggagatcaagggattgcaggctttccggggagtcctggagagaagggagaaaaaggaagt
gctggcatcccaggggtccctggctccccaggccccaaaggatcaccggggactgttggc
tatccagggagccccgggttgcctggagaaaaaggtgacaaaggtctcccgggatcggat
ggcattcccggcatcaaaggagaagcaggtcttcctgggaagcctggccccacgggccca
gccggccagaaaggggagcccggcagtgacggaatcccagggtcggcgggagagaagggt
gaaccaggtctgcccggaagaggattcccagggtttccaggggccaaaggagagaaaggt
tcaaagggcgacgtgggtttcccgggacaagccggcagtccaggcatccccggatccaaa
ggagagcaaggattcatgggtcccccgggaccgcaaggacagccgggcttacctggagct
ccaggccatgctgtggaggggcccaaaggagaccggggcccacagggtcaacctggccta
ccagggcttccgggacctatggggcctccagggctccctgggctcgacggactcaaaggt
gacaaaggaaacccaggctggccgggggctcctggagctccagggcccaagggagagcca
ggattccagggcctgcctgggattggtggctcgccagggatcacgggctccaagggtgat
atggggcctccaggagtgccgggatttcaaggtcagaaaggcctccctggcctgcaggga
acgaagggggatcaaggtgaccagggcttccctggaagtaaaggccttcccggtcccccg
ggccccccaggaccctacgacatcatcaaaggggagccaggacttcctggtcctgagggt
cccgcaggtctgaaggggctcccaggacctccaggccccaaaggacagcaaggtgtgacg
ggatctgtgggcttacctggaccgccaggtagtcccggttttgacggcgccccgggccag
aaaggagagacgggacccttcggccctcctggtccacgagggtttccaggcccgccaggc
cctgatgggctgccaggatccatgggtcccccaggcaccccgtctgttgatcatggcttc
cttgtgaccaggcacagtcaaacaacggatgacccacagtgtcctcctgggaccaaaatt
ctttaccacgggtactccttgctctacgtgcaaggcaacgaacgagcccacggccaggac
ttgggcacggccgggagctgcctgcgcaagttcagtacgatgcccttcctcttctgcaac
atcaacaacgtgtgtaacttcgcctcccgaaacgactactcctactggctgtccacaccc
gagcccatgcccatgtccatggcgcccatcgccggggacaatatcagaccatttattagc
aggtgtgcggtgtgtgaggcaccagccatggtgatggccgtgcacagccagaccattcag
atcccgcagtgccccagcggctggtcctccctctggattggctattccttcgtgatgcac
accagtgccggtgctgaaggttctggccaagccctcgcgtcccccgggtcttgtctggaa
gagttcaggagcgcaccattcatcgagtgccatggccgtgggacttgcaactactatgcg
aacgcttacagcttttggcttgccaccattgagagaagcgagatgttcaagaagcccacg
ccgtccaccttgaaggccggggagctgcgcacgcacgtcagtcgctgtcaagtctgtatg
agaagaacgtaa
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integrated database retrieval system
