Ailuropoda melanoleuca (giant panda): 100478822
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Entry
100478822 CDS
T01329
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100478822 (MMS19)
03400 DNA repair and recombination proteins [BR:
aml03400
]
100478822 (MMS19)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100478822 (MMS19)
DNA repair and recombination proteins [BR:
aml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
100478822 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
HEAT
INTS7_N
TOR1L1_N
Dopey_N
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
100478822
NCBI-ProteinID:
XP_011220298
Ensembl:
ENSAMEG00000000114
UniProt:
G1KZS9
D2H5K8
LinkDB
All DBs
Position
6:complement(99293877..99326810)
Genome browser
AA seq
1030 aa
AA seq
DB search
MAAAAALEAVAPTGALWGLVHDFVMGQQEGPADQVAADVKSGSYTVLQVVEALGSSLENP
EPRTRARGIQLLSQVLLQCQSLLLEKEVVHLILFYENRLKDHHLVIPSVLQGLRALSLCV
ALPPGLAVSVLKAIFQEVHVQSLPQVDRHTVYSIITNFMQTREEELKGLGADFTFGFIQV
MDGEKDPRNLLVAFRIVHDLISRDYSLGPFVEELFEVTSCYFPIDFTPPPNDPHGIQRED
LILSLRAVLASTPRFAEFLLPLLIEKVDSEILSAKLDSLQTLNACCAVYGQKELKDFLPS
LWASIRREVFQTASERVEADGLAALHSLTACLSRSVLRADAEDLLDSFLSNILQDCRHHL
CEPDMKLVWPSAKLLQAAAGASARACDHITSNVLPLLLEQFHKHSQSNQRRTILEMILGF
LKLHQKWSYEDKDERPLNGFKDQLCSLVFMALTDPSTQLQLVGIRTLAVLGAQPDLLSSG
DLELAVGHLYRLSFLEEDSQSCRVAALEASGALAALYPVAFSSHLVPKLAEELCRGELDL
AKGDEPTKCSRHLRCLQALSAVSTHPSIVKETLPLLLQHLFQMNKGSMVAGTSEVIAICQ
SLQQVAEKCQRDPESCWYFHQTAIPCLLALAVQASMPEKEHSVPRKVLLEDEVLAAMVSV
IGTATTHLSPDLAAQSVARIVPLFLDGDISFLPENSFPCRFQPFQDGSSGQRRLVALLMA
FVCSLPRSVEIPQLNQLMRELVELSCCPSCPSSSTAAAKCFAGLLNKLPAGQQLDEFLQL
AVDKVEAGLSPGPCRSQAFTLLLWVTKALVLRYHPLSSCLTHRLMGLLSDPELGPTAADG
FSLLMSDCTDVLTRAGHAEVRIMFRQRFFTDNVPALVQGFHAASQDVKPNYLKGLSHVLN
RLPKPVLLPELPTLLSLLLEALSCSDCVVQLSTLSCLQPLLLEAPQVMSLHVDTLVSKFL
NLSSSPSMAVRIAALQCMHALTRLPTPVLLPYKPQVIRALAKPLDDKKRLVRKEAVSARG
EWFLLGSPGS
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgccgctctggaggcggtggcgcctacgggcgccctgtggggcctcgtg
cacgacttcgtcatgggtcagcaggagggccccgctgaccaagtggctgcagatgtgaaa
tctgggagctatacagtattacaagtggtggaagcccttgggtcctctctagaaaatcca
gaaccccgaactcgggcacgaggaatccagcttctgtcacaggtgctactgcagtgtcag
tccttgctcctggagaaggaagtggtacacctgatcctattttatgagaaccggctgaag
gaccatcatcttgtgatcccatctgtcctgcaaggtttgagggcacttagcctatgtgtg
gccctgcctccagggctggctgtctctgtgcttaaagctatcttccaggaagtccacgtc
cagtccctgccgcaagtggaccgacacacagtctacagtatcatcaccaacttcatgcaa
acccgcgaagaagagctgaagggccttggagctgacttcacctttggcttcatccaggtg
atggatggggaaaaggatccccgaaatcttctggtggctttccgcatcgtccatgacctc
atctccagggactatagcctgggaccctttgtggaggagttgtttgaagtgacgtcctgt
tacttccctattgattttacccccccacctaatgatccccatggcatccagagagaggat
ctcatcctgagtcttcgagctgtgctggcttctacaccacgatttgccgagttcctgctg
cccctgctgattgagaaagtggattctgagattctgagtgccaagctggattctctgcag
actctgaatgcttgttgtgctgtgtacgggcagaaggaactaaaggacttcctccccagc
ctttgggcttctatccgcagagaggtgttccagacggcaagtgagcgggtggaggccgat
ggcctggcggctctccactctctgactgcgtgtttgtctcgctctgtgctgagagctgat
gctgaagacctccttgactccttccttagcaacattctacaggactgcaggcaccatctg
tgtgaaccagacatgaaactcgtgtggcctagtgccaaactgttgcaggcagcggcaggt
gcatctgctcgggcctgtgaccacattaccagcaacgtgttgcctctactgctggaacag
ttccacaagcacagtcagagcaaccagcgacggacaatccttgaaatgatcctgggtttc
ttgaagctgcaccagaaatggagctatgaagacaaggatgaaaggccgctgaatggcttc
aaggaccagctgtgctcactggtgttcatggctctgacagaccccagcacacagcttcag
cttgttggcatccgtacacttgcagtcttgggtgcccagccagatctcctgtcttctggg
gacttggagctggcagtgggtcatctgtacagactgagcttcctggaggaggactcccag
agttgcagggtggcagcactggaagcgtcaggagccctggccgcactctaccccgtagcc
ttcagcagccacctagtgcccaagcttgctgaggaactgtgcagaggggagttagatttg
gctaaaggggatgagcccaccaaatgctcccggcatcttcgctgtttgcaagccttgtca
gccgtatcaacacatcccagtattgtcaaggagaccctgcctctgctgctacagcatctc
ttccagatgaacaaagggagtatggttgcaggaaccagtgaagttattgccatctgtcag
agcctccagcaggtggcagaaaaatgccagcgggaccctgagagctgctggtatttccat
cagacagctataccttgcctgcttgccttggctgtgcaggcttccatgccagagaaggag
cactcagttccaagaaaagtattgttggaggatgaggtcttggctgccatggtgtctgtc
attggcactgccactacccacttgagccctgacttagctgcccagagtgttgcccgtatt
gtgcctcttttcttggatggcgacatctcctttctgcctgaaaacagcttcccttgcaga
ttccagccattccaggatggctcctcagggcagaggcggctggttgcactgcttatggcc
tttgtctgctccttacctcgaagtgtggaaatccctcagctgaaccaactcatgcgggag
cttgtggagctgagctgctgccccagctgcccctcctcctccaccgctgccgccaagtgc
tttgcaggactcctcaacaagctccctgcagggcaacagctggatgaattcctgcagcta
gctgtggacaaagtagaggctggcctgagccctgggccctgtcgtagtcaggccttcaca
ctgcttctctgggtaacaaaggccctagtactcagatatcatcctctcagctcctgcctt
acacaccggctcatgggcctcctgagtgatccagagctaggcccaacggcagctgatggc
ttctctctgctcatgtctgactgcacggatgtgctgacccgtgctggccatgccgaggtg
cggatcatgttccgccagcggttcttcacagataacgtgcctgctttggtccagggcttc
catgctgcttcccaagatgtgaagccaaattacctgaaggggctgtctcatgtactcaat
aggctgcctaagcctgtgcttttgccagagttgcccacgctgctttccttgctgctggag
gccctgtcctgctctgactgtgtagtacagctctccaccctcagctgccttcagcctctt
ctgttggaagcaccccaggtcatgagtcttcacgtggacaccctcgtctccaagtttctg
aacctcagttctagcccttccatggctgtccggattgctgcactgcagtgtatgcacgct
cttactcgtctgcccacccctgtgctgctgccgtacaagccacaggtgatccgagcttta
gccaagcctctggatgacaagaagagactggtgcgcaaggaggcagtatcagccagggga
gaatggtttctgctggggagccctggcagctga
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