Ailuropoda melanoleuca (giant panda): 100478836
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Entry
100478836 CDS
T01329
Symbol
ARHGEF16
Name
(RefSeq) rho guanine nucleotide exchange factor 16 isoform X1
KO
K20688
Rho guanine nucleotide exchange factor 16
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100478836 (ARHGEF16)
Membrane trafficking [BR:
aml04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100478836 (ARHGEF16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
PH
SOS1_NGEF_PH
SH3_9
SH3_2
RHG20_PH
IQ_SEC7_PH
SH3_16
ECT2_PH
DUF7413
Motif
Other DBs
NCBI-GeneID:
100478836
NCBI-ProteinID:
XP_034527525
Ensembl:
ENSAMEG00000009363
LinkDB
All DBs
Position
11:1947878..1969173
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AA seq
838 aa
AA seq
DB search
MQIKLTWGWVSQDGTTRPPQLPVTQNVPRNVWAVLQAWGWLGLRGRPPSLSPGGSATRLS
GMVLAKSVCAGSGSLAAAGTPTVLWFRPLWSPATPRGGILELRPRTSQRKHSDARLGGEY
GRTLWPLSMSQRHSDSSLEEKLLEYRFHSELRLDAKGNPASGLPIVRDSLQVRDNAAFQF
DSSVPPPRSPKEEGPRAVVLSTQSPAALKMGTQQLIPRGLAVSSKAKTPARHQSFGAAVL
SKEAARRDPRLVSAPSFSLDDMDVDTGPEGALRRNLRNRSYRAAMKGLGAPGGERAPIQL
SPKLQALAEEPSPSPARYPAKNKRTLGRKRAHKGSFKDDPGFYQEIRERGLNTSHESDDD
LLGEPSSPEGTGKVDTPIVVKSYRPAQITWSQLPEVVESGLLDELPAEERKRQEAIFEIL
TSEFSYQHSLGILVAEFLQSRELRATMTQTEHHHLFSNIRDVLSASQRFFEALEQRHKAQ
VCVEDISDILEEHAEKHFHPYIAYCSNEVYQQRVLQKLTNSNAAFHEALKEIEKRPACGG
LPMISFLILPMQRVTRLPLLTDTLCLKSQGHPERYKAASRALKAISKLVRRCNEGAHKME
RTELMYTLHTQLDFGKVKSLPLISASRWLLKRGELFVVEETGLFRKLASRPTCYLFLFND
VLVVTKKKSEDSFMVQDYAQVDHIRVQKMEPSDPSLLGAGGGSRSSSVPHPFQVTLLHNS
EGRQEKILLSSDSASDRARWITALTHQERQGQGPTNKGDLLQVEITRAYLAKQADEISLQ
QADVVLVLEQEDGWLYGERLRDGEMGWFPEDFARCITSRMAVEGNVRRMERLRVETDV
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgcagataaagttaacgtgggggtgggtgagccaggatggcacgacccgcccgccccag
ctgccggtgactcagaatgtccccaggaatgtgtgggccgtcctccaggcgtgggggtgg
ctggggctccgcgggcggcccccctccctgtcgccaggaggctcagccacgcgcctctct
gggatggttttagcaaagagcgtgtgtgctgggagcgggagcctggctgctgccggcacc
ccgactgtgctgtggtttaggcccctctggagcccggccacccctcggggagggattctg
gagctgaggcctagaacgtcccagaggaagcactctgatgcaaggttgggcggcgagtat
gggaggacactgtggccactcagcatgtcccagcgacactcagacagctccttggaagag
aagctcctggaataccgtttccactcagagctgcgacttgatgccaaagggaacccggcg
tccgggcttccgattgtccgggactccctgcaggtcagggacaatgccgccttccagttc
gactcctcagtgcccccacctcggtcccctaaggaggaggggccacgggccgttgtcctg
agcacgcagagccctgcggccctcaagatgggcactcagcagctgatccccaggggcctg
gccgtgtccagcaaggccaagaccccagcccgccaccagagcttcggggcggccgtgctc
agcaaggaggctgcccggcgggacccccggctcgtctccgcccccagcttctcgctggat
gacatggacgtagacacgggccccgagggggcgctgagacggaacttgcggaaccgatcg
taccgggcggccatgaagggcctgggggccccgggcggggagagggcccccatccagctc
agccctaagctccaggctctggccgaggagcccagcccgtctcccgctcgatatccggcc
aagaataagaggacactggggcggaaacgtgcacacaagggctccttcaaggacgacccc
gggttctaccaggaaatccgggagcggggcctgaacaccagccatgagtccgacgacgac
ttgctcggtgagccgtccagcccggaagggacgggaaaggtggatacccccatcgtagtc
aagagctaccggcctgcccagatcacctggagccagctcccggaggtggtggagtccggc
ctcctggacgagctgcctgctgaggagcgcaagagacaggaggccatcttcgagatcctc
acgtcagagttctcgtaccagcacagcctgggcatcctggtggccgagttcctgcagtcc
agagagctgcgggcaaccatgacccagacggagcaccaccacctcttctccaacatccgg
gatgtcctgagtgccagtcagaggttcttcgaggccctggagcagcggcacaaggcgcag
gtttgcgtggaggacatcagcgacatcttggaggagcacgccgagaagcatttccacccc
tacatcgcctactgctccaacgaggtctaccagcagcgcgtcctgcagaagctgacaaac
agcaacgctgccttccacgaggccctgaaggagatcgagaagcgtccggcatgcgggggt
ctccccatgatctccttcctgattctccccatgcagagggtgacccggctgcccctcctg
acggacactctctgtctcaagagtcaaggccatcccgagagatacaaggctgccagccgc
gcgctcaaggccatcagcaagctggtgagacggtgcaacgagggagcccataagatggag
cgcacagagctcatgtacacactgcacacgcagctggacttcggcaaggtcaagtccctc
ccgctgatctctgcctcccgctggctgctgaagcgtggggagctcttcgtggtagaggaa
actgggcttttccgaaaactggccagccggcccacatgctacctgttcctgttcaacgac
gttctggtggtcaccaagaagaagagtgaggacagcttcatggtacaggactatgcccag
gtggaccacatccgggtccagaagatggagccctcggacccctctctgctgggggccggt
ggcggcagccgcagctcctcagtgccacaccccttccaggtgaccctgctacacaacagt
gagggccgccaggagaagatcctgctgtcctccgactccgcgagtgaccgggcccggtgg
atcacggcgctcactcaccaggagaggcagggccagggccccaccaacaaaggagacctg
ctccaggtagagatcaccagggcctacttggccaagcaggcggacgagatctcgctgcag
caggcggatgtggtcctggtcctggagcaggaggacggatggctctacggcgagcggctg
agagatggggagatgggctggttccctgaggactttgctcggtgcatcaccagccgcatg
gccgtggagggcaacgtgcgcaggatggagcggctgcgtgtggagacggatgtgtag
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