KEGG   Ailuropoda melanoleuca (giant panda): 100479019
Entry
100479019         CDS       T01329                                 
Symbol
NEDD1
Name
(RefSeq) protein NEDD1 isoform X2
  KO
K16547  protein NEDD1
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aml03036]
    100479019 (NEDD1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:aml04812]
    100479019 (NEDD1)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     100479019 (NEDD1)
   Microtubules and associated factors
    gamma-tubulin ring complex
     100479019 (NEDD1)
Cytoskeleton proteins [BR:aml04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     100479019 (NEDD1)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WDR55 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_IFT122_1st WD40_like eIF2A WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N KNTC1_N NBCH_WD40 Beta-prop_LRRK2 WD_LRWD1 Beta-prop_SCAP DUF1668
Other DBs
NCBI-GeneID: 100479019
NCBI-ProteinID: XP_011233771
Ensembl: ENSAMEG00000004999
UniProt: D2HY96
LinkDB
Position
15:66803815..66851221
AA seq 658 aa
MQENLRFASSGDDIKIWDASSMTLVDKFSPHTSPHGISSMCWSSNNNFLVTASSSGDKIV
VSHYKNKPFLLFELGEGQKQTCVSLNSTSMYLVSGGLNHTVNIWDLKSKRVHRSLKDHKD
EVTSVTYNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHGSNQSVRHLKYSLFKKSLLGS
VSDNGVVTLWDVNSQSPYHNFDSTHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKK
LVKSLVADTPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTSVRCIAFQ
YSTALSKSSLNKGCSNKPTAVNKRAINVSATSGGLQNSGLVREAATTSVGTALPQPMTAA
GGKGAVAVQDKAGLPRSINTDTVSKETDSGKNQDFLSFDDTRKSSLGDMFSPIRDDAVVN
KGGDESVGKDGLDFLPQLNSVLPPRKNPVASSTSVLHSSPLNVFMGSPGKEENEHHDLTA
ESKKIYLGKQEPKDSLKQFAKLISGAETGNLNTSPSSNQTRSPEKFEKPEKEIEAQFIYE
PPVIGSSTPNPKIASSVTAGVASSLSEKIADTIGNNRPNAPLTSVQIRFIQNMIQETLDD
FREACHRDIVNLQVEMIKQFHMQLNEMHSLLERYSVNEGLVAEIERLREENKRLRAHF
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgcaggaaaacctcagatttgcttcatccggagatgacattaaaatatgggatgcttct
tctatgacattggtggataaattcagcccacacacatcaccacatggaatcagctcaatg
tgttggagcagcaataataactttctagtgacagcatcttccagtggcgacaaaatcgtt
gtttcacattacaaaaataaaccttttctacttttcgagcttggtgaagggcaaaagcag
acatgtgtcagtttaaattccacatctatgtatttggtaagtggaggcctaaatcacact
gttaatatttgggatttaaaatcaaaaagagttcatcgatctcttaaggatcataaagat
gaagtaacttctgtcacatataattggaatgattgctacattgcttctggatctctcagt
ggtgaaattattttgcacagtgtaaccactaacttatctagtactccctttggccatggc
agtaaccagtccgttcggcacttgaagtactccttgtttaagaaatcactactgggcagt
gtttcggataacggagtagtaactctctgggatgtgaatagtcagagtccataccataac
tttgacagtacacataaagctccagcttcaggcatctgtttttctcctgtcaatgaattg
ctatttgtgactataggcttggataaaagaatcattctctatgacacctcaagtaagaaa
ctagtgaaaagtttagtggccgacacacctctcaccgcagtagacttcatgcctgatgga
gccactttggctattggatcttcccgtgggaaaatatatcagtatgatttaaggatgttg
aaatcaccagttaaaaccatcagtgctcacaagacatctgtgcgatgtatagcatttcag
tactccactgctctttctaagtcaagtttaaataaaggctgttcaaataagcccacagct
gtgaacaaacgagccattaatgtgagcgctaccagtggaggacttcagaattctggactc
gtcagagaagcagccaccacttctgttggcacggctctaccacagcccatgacagcagcc
ggggggaaaggagcagtagctgtccaagacaaagcaggtttgcctcgaagcataaacact
gatactgtatctaaggaaacggacagtgggaaaaatcaggatttcttgagctttgatgat
accagaaaaagtagcttaggtgacatgttctcacctatcagagatgatgctgtggttaac
aagggaggtgacgagtccgtaggcaaagatggccttgactttctaccacaattgaattca
gtccttcctccaagaaaaaatccagtagcttcaagcacttcagtattgcattctagtcct
cttaatgtctttatgggatctccagggaaagaagaaaatgaacatcatgatctgacagcc
gaatctaagaaaatatatctgggaaaacaggaacctaaggactccctcaaacagtttgca
aagttgatttctggtgctgaaactggaaatctgaatacctctccgtcatctaaccaaaca
agaagtcctgagaaatttgaaaagccagagaaagaaattgaagcccagttcatatatgaa
ccccccgtcattggatcctcaactccaaatccaaagatagcatcctctgtcactgctgga
gttgccagttcactgtcagaaaaaatagctgataccattggaaataatcggccaaatgca
ccattgacatctgttcaaatccgttttattcagaacatgatacaggagacattggatgac
tttagagaagcatgccatagggacattgtgaacttgcaagtggagatgattaaacagttt
cacatgcaattgaatgaaatgcactctttgctggaaagatactctgtgaatgaaggttta
gtggctgaaattgaaagactacgagaagaaaacaaaagactacgggcccacttttga

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