Ailuropoda melanoleuca (giant panda): 100479076
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Entry
100479076 CDS
T01329
Symbol
ABCA4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100479076 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aml02000
]
100479076 (ABCA4)
Transporters [BR:
aml02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100479076 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
AAA_22
SRP54
AAA_29
Motif
Other DBs
NCBI-GeneID:
100479076
NCBI-ProteinID:
XP_019653825
Ensembl:
ENSAMEG00000009466
LinkDB
All DBs
Position
2:complement(63770732..63905047)
Genome browser
AA seq
2271 aa
AA seq
DB search
MGFARQIQLLLWKNWTLRKRQKIRFVVELVWPLSLFLILIWLRNTNPLYSQHECHFPNKA
MPSAGMLPWLQGMFCNVNNPCFQSPTPGESPGIVSNYNNSILARVFRDFQELLMEAPERQ
HLGHVWKELQTLSQLMDTLRTHPERVAGKGIRIRDVLKDEETLTLFLMKNIGLSDSVVYL
LVNSQVRPEQFAHGVPDLMLKDIACSEALLKRFIIFSQRHGAQTVRDAMCSLSQGTLQWV
EDTLYANVDFFKLFRVLPTLLDSSSQGINLRFWGRILSDMSPKIQEFIHRPSVQDLLWVA
RPLMQTGGPETFTQLMSILSDLLCGYPERGGSRVFSFNWYEDNNYKAFLGIDSTRKDPIY
SYDKRTTTFCNALIQSLESNPLTKIAWRAAKPLLMGKILFTPDSPAARRILQNANSTFEE
LERLRKLVKAWEEVGPQIWYFFDKSTQITMIRDTLENPTVKGFLNSQLGEEGITAEAVLN
FLDRGPRESQADGVANFNWRDVFNITDRTLRLASRYLECLILDKFESYDDEIQLTQRALS
LLEENRFWAGVVFPDMYPWTSALPPHVKYKIRMDIDVVEKTNKIKDRYWDSGPRADPVED
FRYIWGGFAYLQDMIEQGITRSQAQVEVPVGIYLQQMPYPCFVDDSFMIILNRCFPIFMV
LAWIYSVSMTVKSIVLEKELRLKETLKNQGVSNAVIWCTWFLDSFSIMSMSIFLLTIFIM
HGRILHYSNPFILFLFLLAFSTATIMQCFLLSTFFSRASLAAACSGVIYFTLYLPHILCF
AWQDRMTADLKMAVSLLSPVAFGFGTEYLARFEEQGLGLQWSNIGNSPMEGDEFSFLMSM
KMMLLDAALYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPI
TEEMEDPEHPEGINDSFFERELPGLVPGVCVKNLVKIFEPYSRPAVDRLSITFYENQITA
FLGHNGAGKTTTLSILTGLLPPTSGTVLIGGKDIETSLDAVRQSLGMCPQHNILFHHLTV
AEHILFYAQLKGKSWEEAQLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGGA
KVVILDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYC
SGTPLFLKNCFGTGFYLTLVRKMKNIQSQRAGCEGTCGCASEGFSSRCPAHVDEITPEQV
LDGDVNELMDMVRHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEDTLADLGLS
SFGISDTPLEEIFLKVTEDSDSGPLFAGGTQQKRENVSLRHPWLGPREKAREIPQGSNGC
SAEPAAPPGVQPSSEPEQRRRLNAGAQLLLQHVQALLVKRFHHAVRSRKDFLAQIVLPAT
FVFLALMLSIIVPPFGEYPALILHPWMYGQQYTFFSLEQPGSEQLAALADVLLNKPGFGN
RCLKEEWLPEYPCGNSTPWKTPSVSPNITHLFQKQKWTPENPSPSCMCSTREKLTMLPEC
PEGAGGLPPPQRIQRSTEILQDLTNRNISDFLVKTYPALIRGSLKSKFWVNEQRYGGISI
GGKLPVLPINGEALAEFLSHLGQMMNVSGGPITREASKEMPAFLKHLETEDNIKVWFNNK
GWHALVSFLNVAHSAILRACLPKDKDPEEYGITVISQPLNLTKEQLSEITVLTTSVDAVV
AICVIFAMSFVPASFVLYLIQERVNKAKHLQFVSGVNPTTYWLTNFVWDIMNYAVSAALV
VGIFIGFQKKAYTSPENLPALVALLMLYGWAVIPMMYPASFLFDIPSTAYVALSCANLFI
GINSSAITFILELFENNQTLLRFNAMLRKLLIIFPHFCLGRGLIDLALSQAVTDVYARFG
EEHSANPFQWDLIGKNLVAMAAEGVVYFLLTLLTQHHFFLTRWIAEPAKESIIDEDDDVA
EERQRIISGGNKTDILRLNALTKIYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTF
KMLTGDTTVTSGDATIAGKSILTNISDVHQNMGYCPQFDAVDDLLTGREHLYLYARLRGV
PADEIERVANWSIQSLGLSLYADRLVGTYSGGNKRKLSTAIALMGCPPLVLLDEPTTGMD
PQARRMLWDTIVSVIREGRAVVLTSHSMEECEALCTRLAIMVKGTFQCLGTIQHLKYKFG
DGYIVTMKIRSPKEDLLPDLNPVEQFFQGNFPGSVQRERHYNMLQFQVPSSSLARIFRLL
IAHKDSLLIEEYSVTQTTLDQVFVNFAKQQAEIHDLPLHPRAAGASQQPKV
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgcgagacagatccagcttttgctctggaagaactggaccctgaggaaaagg
caaaagattcgctttgtggtggaacttgtatggcctttatctttatttctgatcttgatt
tggttaaggaataccaacccactctacagccaacatgaatgccattttcccaacaaggcg
atgccctcagcaggaatgttgccgtggctccagggaatgttttgcaacgtgaacaatcct
tgttttcaaagccccaccccgggagaatctcctggaattgtgtcaaactataacaactcc
atcttggcaagggtgtttcgggattttcaggaactcctcatggaggcaccagagaggcag
caccttggccatgtttggaaggaacttcaaaccttgtctcaactcatggacaccctccgg
actcaccctgagagagttgcgggaaaagggatacgaattcgggatgtcctaaaagatgaa
gaaacactgacactatttctcatgaaaaacattggcctgtctgactcagttgtctacctt
ctggtcaactcccaagttcgtccagagcagtttgctcatggagtcccagacctgatgctg
aaggacatcgcctgcagcgaggctctcctgaagcgcttcataatctttagccagcgccac
ggggcacagacagtgcgcgacgccatgtgctccctctcccagggtaccctacagtgggtg
gaagacactctgtatgccaatgtggacttcttcaagctcttccgtgtgcttcccacactc
ctagacagcagttctcaaggtatcaatctgagattctggggaagaatattatctgatatg
tcgccaaaaattcaagagttcatccatcgaccaagtgttcaagacttgctgtgggtagcc
aggcctctcatgcagactggtggtccagagaccttcacacagctgatgagcatcctgtct
gatctcttgtgtggctacccagagagaggaggctctcgagtgttctctttcaactggtat
gaagacaataactataaggccttcctagggattgactccacaaggaaggatcctatctat
tcttatgacaaaagaacaacaaccttttgtaatgcattgatccagagcctggagtcaaac
cctctcaccaaaatagcctggagggcagcaaagcctttgctgatgggaaaaatcctcttt
actccagattctccggcagcacgcagaatactgcagaatgccaactcaacttttgaagag
ctggagcgccttaggaagttggtcaaagcctgggaagaagtgggcccccagatctggtac
ttctttgacaagagcacacagatcaccatgatcagagacaccctggagaacccaacagtg
aaaggctttttgaatagtcagcttggtgaagaaggtatcactgcagaagctgtgctgaac
ttcctggataggggtcctcgagagagccaggcagatggcgtggccaacttcaactggagg
gatgtatttaacatcacggatcgcaccctacgtctggctagcagatacctggagtgcttg
atcctggacaagtttgaaagctatgatgatgaaattcagctcactcaaagagccctgtct
ctgctggaggaaaacaggttctgggctggtgtcgtgttccctgacatgtatccctggacc
agtgccctaccaccccacgtgaagtacaagatccggatggacatcgatgtggtggagaag
accaataagatcaaagacaggtactgggattctggtcccagagctgatcccgtggaagat
ttccgatacatctggggaggatttgcctatctacaggacatgattgaacaggggatcacc
aggagtcaggctcaggttgaggttccagttggaatctatctccagcagatgccttacccc
tgcttcgtggatgactcttttatgatcatcctgaaccgctgtttccctatcttcatggtg
ctggcctggatctactctgtctccatgactgtgaagagcatcgtcttggagaaggagttg
agactgaaggagaccttgaaaaatcagggtgtctccaatgcagtgatttggtgtacctgg
ttcctggacagcttctctatcatgtcaatgagcatcttcctcctgaccatattcatcatg
catggaaggatcctgcattacagcaatccattcatcctcttcctgttcctgttggctttc
tccacggctacgatcatgcagtgcttcctgctcagcaccttcttctccagggccagcctg
gcagcagcctgcagtggcgtcatctacttcaccctctacctgccacacattctctgtttc
gcctggcaggaccggatgacagctgacctcaagatggctgtgagcctgctgtctcctgtg
gcatttgggtttggcactgagtacctggctcgctttgaggagcaaggcctggggctgcag
tggagcaatatcgggaacagtcccatggaaggggatgaattcagtttcctgatgtccatg
aagatgatgcttcttgatgctgctctgtatggcctgcttgcctggtaccttgaccaggtg
tttccgggggactatggaaccccacttccttggtacttccttctacaagagtcctattgg
cttggtggtgaagggtgttcaaccagagaagaacgggccctggaaaagacggaacccata
acagaggaaatggaggatcctgagcacccagaaggaataaatgactccttctttgaacgt
gaacttccaggcttggttcctggggtatgtgtgaaaaatctggtgaagatttttgagccc
tacagcagaccagccgtggaccgtcttagcattaccttctacgagaaccagatcaccgcg
ttccttggtcacaatggagcggggaaaaccaccaccttgtccatcctgacgggtctgttg
ccaccaacatcagggactgtgctcatcgggggaaaggacattgaaaccagcctggatgca
gtccggcagagtcttggcatgtgtccacagcacaacatcctgttccaccacctcacagtg
gctgaacacatcctgttctacgcccagctgaaagggaagtcttgggaggaggcccagctg
gagatggaagccatgttggaggacacaggcctccaccacaagaggaacgaggaagctcag
gacctatcaggtggcatgcagaggaagctgtctgtagccattgcctttgtgggaggtgcc
aaggttgtcattctggatgagcccacctccggggtggacccctactcgagacgctcaatt
tgggacttgctcctgaagtatcgctcaggcagaaccatcatcatgtccactcaccacatg
gacgaggccgacctcctcggggaccgcatcgccatcatctcccagggaaggctctactgc
tcgggcaccccgctcttcctgaagaactgctttggcacgggcttctacttaaccttggta
cgcaagatgaaaaacatccagagccaaagagcaggctgtgaggggacctgcggctgtgca
tctgagggtttctccagcagatgtccagcccacgtagatgagataactccggaacaagtc
ttggacggagatgtgaatgagctgatggatatggtacgacaccatgtcccagaggcaaag
ctggtggaatgcatcggtcaagaacttatcttccttcttccaaacaagaatttcaagcag
agagcgtacgccagccttttcagagagctagaggacacactagctgacctggggctcagc
agttttggaatttctgacactcccctggaagagatttttctgaaggtcacggaagattct
gattcaggacctctgtttgctggtggcactcaacagaaaagagaaaacgtcagcctccga
cacccctggttgggtcctagagagaaggccagagagattccccagggctccaatggctgc
tctgcggagccagctgcccccccgggggtccagccctcctcagagccagagcagcgcaga
aggctcaacgcaggggcgcagctgctcctccagcacgtgcaggcattgctggtcaagcga
ttccaccacgcggtgcgcagtcgcaaggacttcttggcccagattgtgctcccagccact
tttgtgtttttggctctgatgctttccatcatcgtccctccctttggtgaatatcctgct
ttgatccttcacccctggatgtatgggcaacagtacactttcttcagtttggagcagcca
ggcagtgagcagcttgcagcacttgcagacgtcctcctgaacaagccgggctttggcaat
cgctgcctgaaggaagagtggcttccggagtacccgtgtggcaattcaaccccctggaag
actccttctgtgtccccgaacatcacccacctgttccagaagcagaaatggacgccagag
aacccctcaccctcctgcatgtgcagcaccagagagaagctcaccatgctccctgagtgc
cccgagggcgcaggggggctcccaccccctcagagaatacagcgcagcactgaaattcta
caagaccttaccaacaggaacatctccgacttcttggtaaaaacatatcctgctcttata
cgtggcagcttaaagagcaaattctgggtcaacgaacagaggtacggagggatttccatc
ggaggaaagctcccagttcttcccatcaatggggaagcacttgctgaatttttaagccac
cttggccagatgatgaatgtgagcgggggccctatcaccagagaggcctctaaggaaatg
cctgctttccttaaacatctagaaactgaagacaacataaaggtgtggtttaacaacaaa
ggctggcatgccctggtgagctttctcaacgtggcccacagcgccatcttacgggcctgc
ctgcccaaggacaaggaccccgaggaatacggcatcaccgtcatcagccagcccctgaat
ctgaccaaggagcagctctcagagatcacagtgctgaccacttcggtggatgctgtggtt
gccatctgtgtgatttttgccatgtccttcgtcccagccagctttgtcctttatttgatc
caagagagggtaaacaaagccaaacacctccagtttgtcagcggagtgaaccccaccacc
tactggctgaccaacttcgtctgggacattatgaattatgctgtgagcgctgcactggtg
gtgggaatcttcatcgggtttcagaagaaagcctacacttctccagaaaatcttcctgcc
cttgttgccctgctcatgctgtatggatgggcagtcattcccatgatgtacccagcgtcc
ttcctgtttgatatccccagcacagcctatgtggccttgtcttgtgctaacctgttcatc
ggcatcaacagcagtgcaatcaccttcatcctggaattatttgagaataaccagacgctg
ctcagattcaacgccatgctgaggaagctgctcattatcttcccccacttctgcctgggc
cggggcctcattgacctggcgctgagccaggctgtgacggatgtctatgcccggtttggt
gaggagcactctgcaaatccattccagtgggatctgattgggaagaacctggttgccatg
gccgcagagggagtggtgtacttcctcctgaccctccttacccagcaccacttcttcctc
acccgatggattgccgagcctgctaaggagtccatcatagatgaagatgacgatgtggct
gaagaaagacaaagaattattagtgggggaaataaaactgatatcttaaggctaaatgca
ctaaccaagatttattcgggcacctccagcccagcagtggacaggctgtgtgtcggagtc
cgccctggagagtgctttggtcttctgggcgtgaacggagctggcaagacaaccacattc
aagatgctcactggggacaccacagtaacctcaggtgacgccactatagcaggcaagagt
attttaaccaatatatctgacgtccatcaaaatatgggctactgtcctcagtttgatgca
gtcgatgacttgctcacaggacgagaacatctttacctttatgcccggcttcgaggtgta
ccagcagatgaaattgagagggtggcaaactggagtattcagagcctaggcctgtctctc
tatgcagaccgcctggtcggcacctacagtggaggcaacaaacggaagctctctacagcc
attgcactgatgggctgcccgcctctggtgctgctggacgagcccaccacaggcatggac
ccccaggcacgccgcatgttgtgggacaccattgtgagcgtcatcagagaagggagagct
gtggtcctcacatcccacagcatggaagaatgcgaggctctgtgtacgcggctggccatc
atggtgaagggcacctttcagtgtctgggcaccattcagcacctcaagtacaagtttgga
gatggctacattgtcacgatgaaaatcagatccccaaaggaagacttgcttcctgacctg
aatccggtggagcagttcttccagggcaacttcccaggcagcgtgcagagggagagacac
tacaacatgctccagttccaggtcccctcctcctccctggcccgcatcttccggctgctc
attgcccacaaggacagcctgctcatcgaggagtactctgtcacacagaccacgctggac
caggtatttgtgaattttgctaaacagcaggctgaaattcatgaccttcctttgcaccct
cgagccgctggagccagccaacaacccaaggtctga
DBGET
integrated database retrieval system
