Ailuropoda melanoleuca (giant panda): 100479114
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Entry
100479114 CDS
T01329
Name
(RefSeq) tripartite motif-containing protein 60
KO
K12029
tripartite motif-containing protein 60/61
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100479114
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100479114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-RING_6
Sina_RING
zf-rbx1
zf-RING_10
zf-Nse
TRAF3_RING
Spore_III_AA
Motif
Other DBs
NCBI-GeneID:
100479114
NCBI-ProteinID:
XP_011233123
LinkDB
All DBs
Position
5:complement(92506729..92508150)
Genome browser
AA seq
473 aa
AA seq
DB search
MEFITALADLQMGASCPICLDYLKEPVTINCGHNFCLSCISMFWKNLNGTFPCPFCRYCS
PERKFTNNPQLGNLIEIAKLLQIRRSKRKRKEEKLICEKHNQVLTFFCQKDLEVLCPQCS
FSADHQNHYIWPIEKAAPYHRKRLQNCTELWKERVEQVEKVITMQSRKSLELKKKVQCRR
EEIKSEFEQILLFLKNEQEIVLRQLQDEEMDTLTKLNENLTTFSNYLSTLKHLSKEIEGK
YMKSELELLTGVKSIYHRYKTLKSPEPFLFQLKEYGYHFAPQYSGLNKITKRFQVDLILD
PETAHRKLIVSEDRKTVQYGNKRHNLPHNPRRFYLCQAVLASRGYNSGRQYWEVEVKDKP
EWIVGICRDSLSRRRKNQCQPILAQDGLWGVGRCSQSNYIALGPKKINLLPKVIPRKIGI
FLDCELCEVSFYNLSDRSLLYIFNYCLTETLWPYFYTGTDSKPLKICTVTDSE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggagtttattacagccctggcagacctccaaatgggggctagctgtcccatctgtctg
gactacttgaaagagccagtgaccatcaactgtggacataacttctgtctctcctgcatc
agtatgttctggaagaatctaaatgggactttcccctgccccttttgccgttactgctct
ccagagaggaaattcacaaacaatccccaactgggtaatttgattgaaattgctaagcta
ctacagataagaagaagcaagaggaagaggaaggaagagaagcttatatgtgaaaaacat
aatcaggttttgacctttttctgtcagaaggacctagaagttttatgtccacagtgtagt
ttctccgctgatcaccagaaccactatatttggcccatagagaaggctgctccctatcat
aggaaaagattgcagaattgtactgaactatggaaggagagagtagaacaagttgaaaaa
gtgataactatgcaaagcagaaaatcactggaactgaagaagaaggtacagtgtaggaga
gaagaaataaagtctgaatttgagcagattttgttgtttctcaaaaatgagcaagagatt
gtgcttcggcaattacaagatgaagaaatggatactttaacaaaactaaatgaaaaccta
acaacattttcaaattatctttccacattaaaacatctatcaaaggaaatagagggcaaa
tatatgaagtcagagctggaattactgacaggtgttaaaagtatctaccatagatataaa
accttaaagtcccctgaaccttttttgttccaattaaaggaatatggttaccattttgct
ccacaatattctggcctaaataaaattaccaagagatttcaggtggatctaattctagat
cctgaaacagcacatcgtaagcttattgtctcagaagatagaaaaactgtgcaatatgga
aataaaaggcataacttacctcataacccaaggaggttttatctctgccaggctgttctg
gcttctaggggttataattctggcaggcagtattgggaggtggaagtgaaagacaagcct
gaatggattgtgggtatctgtagagactctctttccagaaggagaaagaatcagtgtcaa
ccaattttagcacaggatggattatggggtgttggacgatgtagtcagagtaattatatt
gcattgggtcctaaaaaaattaatcttctgccaaaagtaatacctagaaagattggcatt
tttttagactgtgagttgtgtgaggtttccttttataatttgagtgatagatcccttctc
tatatttttaactattgtcttacagaaacactttggccttatttctatactggaactgac
tcaaaacctcttaaaatctgtacagtaacagattctgaatga
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