Ailuropoda melanoleuca (giant panda): 100479398
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Entry
100479398 CDS
T01329
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X3
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03013
Nucleocytoplasmic transport
aml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100479398 (SRRM1)
03015 mRNA surveillance pathway
100479398 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100479398 (SRRM1)
03041 Spliceosome [BR:
aml03041
]
100479398 (SRRM1)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100479398 (SRRM1)
Spliceosome [BR:
aml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
100479398 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
100479398
NCBI-ProteinID:
XP_019658312
Ensembl:
ENSAMEG00000010075
LinkDB
All DBs
Position
2:4636948..4667687
Genome browser
AA seq
917 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQR
RQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSP
RMQMGKRWQSPVTKSGSRRRRSPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPPPR
RRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSP
VTKRRSPSLSSKHRKGSSPSRSTREPRSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSS
PQRRQSPSPSTRPIRRVSRTPEPKKTKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAP
QSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHKK
HKKHKKEKAVAAAAAAAVTPAAPTAPTTTSAQEEPEAEPEPKKETESEPEDNLDDLEKHL
REKALRSMRKAQVSPQS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagctactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctgctcttaagtgcacaagaaaacatcgctggaatccct
tctgcttttctagaactgaagaaagaagaaataaagcagagacaaattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaaggataagagggataaggaagaaaaagaa
agcagcagagaaaaaagggagaggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgctccagaaaagaaggaaaaaact
ccagagctcccagaaccatcagtgaaagtcaaagaaccttcagtacaagaggccacgtct
actagtgacatcctgaaagttcccaaacccgaacctgtaccagagcctaaagaaccttct
ccggagaaaaattccaaaaaagaaaaagagaaggagaagacccgaccaagatctcggtca
cgttccaaatcaagatcccggacacggtctcgctctccttctcatactcgacctagacgg
cgtcatagatcccggtcaagatcatactcacctagaaggaggccaagtccgagaaggcgg
ccgtctcctcgaagaagaaccccaccaagacgaatgccgcctccacccaggcatagaagg
agtagatctccagtgagacgaagaaggcgttcatcagcatccttgtctggaagtagctca
tcatcctcttcgtctcgttcccggtcaccgccaaagaagcctcctaagaggacatccagc
ccccctcgaaaaactcgtaggttatctccttcagcaagtcctcccaggcgaaggcatagg
ccatcacctccagcaactccaccgccaaaaactcgtcattccccgacaccccagcagtca
aaccgtacaagaaaaagtcgtgtttctgtctctccagggagaacttcagtgacaaaacat
aaaggtactgaaaaaagagagtccccttcaccagcacctaagcctagaaaagtagagtta
tctgaatcggaagaagataaaggtggcaaaatggctgcagcagattctgtgcagcagaga
cgtcagtacagacggcagaaccagcagtcctcatctgattctggctcctcttcttcctca
gaagatgagcgacccaagaggtcccatgtgaagaatggtgaggtaggcaggcggcggaga
cattccccttctcggagtgcctctccatcacctcgaaagcgccagaaagagacttctcct
cggatgcaaatgggaaagcgatggcaatcgccagtgactaaaagtggtagtagacggagg
aggagtccctccccaccacccaccagaaggcgacgttctccttctcctgcccctcctcct
cgtaggcgcaggtctcccacgccgccaccacgacgaaggactccttctcctcccccccgc
cggcgctcaccttccccaagaagatactctcctccgatacagaggagatactctccttct
ccgcctccaaagagaagaacggcttctccccctccccctcctaaacgaagggcgtcacca
tctccaccaccaaagcggcgggtctcccattctccacctcccaaacaaagaagctcccca
gtcaccaagagacgttcgccttcattatcatcaaagcataggaaagggtcttccccgagc
cggtctacccgggagccccggtcaccacaaccaaacaaaaggcattcgccctcaccacgg
cctcgagctcctcagacctcctcaagtcctccacctgttcgaagaggggcatcatcatca
ccccaaagaaggcagtccccttctccaagtactaggcccattaggagagtctccaggact
ccggaacccaaaaagacaaaaaaggctgcctcaccaagccctcagtctgtaaggagggtc
tcatcctcccgatctgtctcaggatctcctgagccagcagctaaaaaacccccagcacct
caatctcctgtccagtcccagtccccctctaccaactggtcaccagcggtaccggtcaaa
aaggctaaaagcccaacaccaagcccatctccagcaaggaactcagacccagaaggaggt
ggaaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaagaag
cacaaaaaacacaagaaggaaaaggccgtggcggcagccgccgcagcagccgtcaccccc
gcggcccccacggcccccacgaccacatcagcacaggaggaaccggaggcagagcccgag
cctaagaaggagaccgaaagcgagcccgaagacaacctcgacgacttagaaaagcacctg
cgcgaaaaggcgctgaggtcgatgcggaaggctcaagtgtccccacagtcttag
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