Ailuropoda melanoleuca (giant panda): 100479679
Help
Entry
100479679 CDS
T01329
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100479679 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aml03041
]
100479679 (USP39)
Spliceosome [BR:
aml03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
100479679 (USP39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100479679
NCBI-ProteinID:
XP_002922905
Ensembl:
ENSAMEG00000002291
UniProt:
G1L6A4
LinkDB
All DBs
Position
4:105305079..105334173
Genome browser
AA seq
565 aa
AA seq
DB search
MSGRSKRESRGSTRGKRESESRGSSGRVKRERDREREAEVPSSRGSPVRVKREVEPVSAR
EAPTPVVPAVRVKRERDADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDF
EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE
IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL
QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML
QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL
PHPDLPAEEKEQLLQNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA
KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL
REYLSEEVQAAHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ
MITLSEAYIQIWKRRDNDETNQQGA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccggtccaagcgtgaatctcgtggttctacccgcgggaagcgcgagtccgag
tcgcggggcagctcgggtcgcgtcaagcgggagcgagatcgggagcgggaggccgaggtg
ccgagctcccggggcagcccagtgcgtgtgaagcgggaggtcgagccggtgagcgcgcgg
gaggccccgacgcccgtggtcccggctgtgcgggtaaagcgggagcgcgacgccgacgag
gactctgagcctgagcgggaggtgcgagcaaagaatggccgcgtggattctgaggaccgg
aggagccgccattgcccgtacctggataccattaacaggagtgtgctggactttgacttt
gagaagctgtgttccatctccctctcacatattaatgcatatgcctgtcttgtgtgtggc
aagtactttcagggtcgtggtttgaagtctcatgcctacattcacagcgtccagtttagc
caccatgtcttcctcaacctccacaccctcaagttctactgccttccagacaactacgag
atcatcgattcctcgctggaggatatcacatatgtgttgaaacccactttcacaaagcag
cagattgcaaacttggacaagcaagccaaattgtcccgggcatatgatggtaccacttac
ctgccaggcatcgtgggcctgaataacataaaggccaacgactatgccaatgctgtcctt
caggctttgtctaatgttcctcctctccggaactacttcctggaagaagacaattataag
aacatcaagcgtcctccaggggatatcatgttcttgttggtccagcgttttggagagctg
atgagaaagctctggaaccctcgaaatttcaaggcacatgtctctccccacgagatgctt
caggctgttgtcctttgcagcaagaagacttttcagatcaccaagcaaggggatggagtt
gactttctgtcctggtttctgaatgctctacactcagcgctggggggcacaaagaagaaa
aagaagactatcgtgactgatgttttccaggggtccatgaggatcttcactaaaaagctt
cctcatcctgatctgcctgcagaggagaaagagcagctgctgcagaatgacgagtaccag
gagacgatggtggagtccaccttcatgtacctgacgctcgacctcccgaccgcccccctc
tacaaggacgagaaggagcagctcatcatccctcaggtgccgctcttcaacatcctcgcc
aagttcaacggcatcacggaaaaggaatataagacctacaaggagaactttctaaaacgc
ttccagctcaccaagctgcctccatatctcatcttttgtattaagagattcactaaaaac
aatttctttgtggagaagaatccaaccattgtcaacttccctattacaaatgtggacctg
agagagtacttgtctgaggaggtgcaggcggcgcacaagaacaccacctacgacctcatc
gccaacatcgtccacgacggcaagccctcggagggctcctaccggatccatgtgctgcat
cacgggacgggcaaatggtatgaattacaagacctgcaggtgactgacatcctgccccag
atgatcacactctcagaggcttacattcagatttggaagaggcgagataatgatgaaacc
aaccagcagggggcttga
DBGET
integrated database retrieval system
