Ailuropoda melanoleuca (giant panda): 100479808
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Entry
100479808 CDS
T01329
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X3
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100479808 (CHD7)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100479808 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
100479808
NCBI-ProteinID:
XP_002915762
Ensembl:
ENSAMEG00000005699
UniProt:
D2H2C4
LinkDB
All DBs
Position
9:34961333..35089661
Genome browser
AA seq
2995 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPIDQGFASLQPSLHHPSTN
QNQTKLTHFDHYNQYEQQKMHLMDQPNRMMSSAPGNGLASPHSQYHAPPVPQVPHGGSGG
SQMGVYPGLQNERHGQSFVDSGSMWGPRAVQVPDQIRAPYQQQPQPQPPQPAPSGPPTQG
LPQHMQQMGSYLARGDFSMQQHGQPQQRMSQFSQGQEGLSQGSPFIATSGPGHLPHVPPQ
SPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRSQTVPS
PTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSNSGQGL
MHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGIP
MEVGSYPNMPHPQPSHQPPGAMGIGQRNMGPRNMQPSRPFMGMSSAPRDLAGHMRPNGCP
GVGLADPQAIQERLLPGQQHPGQQPSFQQLPTCPPMQPHPGLHHQSSPPHPHHQPWAQLH
PSPQNTPQKVPVPQHSPSEPFLEKPVPDMTQVSGPNAQLVKSDDYLPSVEQQSQQKKKKK
KNNHIVAEDSSKSFGKDDFSGGVDNQELNRNSLDGSQEEKKKKKRPKVKKDPKEPKEPKE
KKEPKEPKTPKAPKIPKEPKEKKAKTATPKPKSSKKSSNKKPDSEASALKKKVNKGKTEG
SENSDLDKTPPPSPPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADTAGRDS
PSNTSQSEQQESVDAEGPVVEKIMSSRSVKKQKDSGEEVEVEEFYVKYKTFSYLHCQWAS
VEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVDRIMDFARSTDERGEPVT
HYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLMSREPETERVERPPAVDWKKSESSREY
KNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVI
APLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT
TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVE
ELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKE
ETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAE
EKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDIL
EDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCI
IFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM
SGRESATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIES
EGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQT
RLYSAVKEDELMEFSDLESDSEEKPCTKPRRPQDRSQGYARSECFRVEKNLLVYGWGRWT
DILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRALVNH
SGLSAPVPRGRKGKKVKAQSTHPVVQDADWLAGCNPDALFQEDSYKKHLKHHCNKVLLRV
RMLYYLRQEVIGDQADKILEGADSSETDVWIPEPFHAEVPTDWWDKEADKSLLIGVFKHG
YEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTRT
PFKDEIDEFANSPPEDKEDSMEIRATGKPSESTAELGQLYWPNTSTLTTRLRRLITAYQR
SYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTFG
VIFDPVKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPGDEPPDLSSM
IEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGRHDRDLLV
GAAKHGVSRTDYHILNDPELSFLDAHKNFAQNRGAGNMSSLTPLAIGFGQTPAVLSSAHV
QEEKATGQSEGKAEESGSTAAQEKAEGKEEEEETDGGEKDSKQGCEAEASSVKSELKGME
VSADTGPKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTARDE
TRDGFYMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFDF
QGLIPGYTPPTMDSPLQKRSFAELSMVGQASISGSEDLTTSPQLSKEDALNLSVPRQRRR
RRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREAASSTSNFSSLT
SKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLVDGEPPMKRRRGRRKNVEGL
DLLFMSHKRTSLSAEDAEVTKAFEEDIETPPTRNIPSPGQLDPDTRIPVINLEDGTRLVG
EDAPKNKDLVEWLKLHPTYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLDINTLT
GEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTEIVKQSGFVPESMFDR
LLTGPVVRGEGASRRGRRPKSEIARAAAAAAAAASTSGINPLLVNSLFAGMDLTSLQNLQ
NLQSLQLAGLMGFPPGLATAAAAGGDAKSPAAVLPLMLPGMAGLPNVFGLGGLLNSPLSA
AAGTAAAAPGPGDPEDGASKAEEKGNENEEENKDSEKSTDAVSATDSANGSVGAATAPAG
LPSNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGSSEEKAPDKA
EGAAFQEEENLEGSDAEENLDKTAESSIFEDEIAQGEELDSLDGGDELENNENDE
NT seq
8988 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccgggaatgatgagtctttttggcgaggatgggaatattttcagtgaaggc
cttgaaggccttggagaatgtggttaccctgaaaatccagtgaaccccatgggtcagcaa
atgccgatagaccaaggctttgcctccttgcagccctcccttcatcatccctcaactaat
caaaatcaaacaaagttgacccatttcgatcactataatcagtacgaacaacaaaagatg
catctgatggatcagccaaacaggatgatgagcagcgcccctgggaacgggctcgcttct
cctcactctcagtatcacgcccctcccgtccctcaggttccccacgggggcagtggcggc
agtcagatgggcgtctaccctggcctgcagaacgaaaggcacgggcagtctttcgtggac
agcggctccatgtggggcccccgggctgtgcaggtgccggaccagatccgggccccctac
cagcagcagccccagccgcagccaccccagcccgccccgtcggggccccccacacagggc
ctccctcagcacatgcagcagatgggcagctatctggcacgtggggatttttccatgcaa
cagcacggccagccacagcagaggatgagccagttttcccaaggccaggagggcctcagt
cagggcagtcctttcattgccacgtcaggccccggccacttgccccacgtgcccccgcag
agtcccagcatggcgccctccttgcgccattcagtgcagcagttccaccaccacccccct
actgctctccacggagaatccgttgcccacagccccagattctcccctaatcctcctcag
caaggggctgtgaggccacagacccttaactttagttctcggagccagacagtcccctca
cctactataaacaactcagggcagtattctcgatatccttacagtaacctaaatcaggga
ttagttaacaatacagggatgaatcaaaatttaggccttacaaataatactccaatgaat
cagtccgtaccaagataccccaatgctgtaggattcccatcaaacagtggtcaaggacta
atgcaccagcagcccatccaccccagcggctcacttaaccaaatgaacacacaaactatg
catccttcacagcctcagggaacttacgcctctccacctcccatgtcacccatgaaagca
atgagcaatccggcaggtactcctcctccacaagtcaggcccggaagtgctgggatacca
atggaagttggcagttatccaaatatgccccacccgcagccatctcaccagccccctggt
gccatgggaatcggacagaggaatatgggccccagaaacatgcagccgtctcgtccgttt
atgggcatgtcctcagcaccgagggacttggctgggcacatgagaccaaatggttgtcct
ggtgttggccttgcagatccccaagcaatccaggaacgactgctgcctggccaacagcat
cctgggcagcagccgtctttccagcagttgccaacctgccctccgatgcagccccacccg
ggcttgcaccaccagtcttcgcccccacacccgcatcaccagccttgggcacagctccac
ccatcaccccagaacaccccgcagaaagtgcctgtgcctcagcattctccatcggagccc
tttctagagaaaccagtgccggatatgactcaggttagtggaccgaacgctcagctagtg
aagagtgatgattacctgccgtccgtagagcagcagtcacagcagaagaagaagaaaaag
aaaaacaaccacattgttgcagaggattccagtaaaagttttggtaaagatgacttctct
ggtggggttgataaccaggaactaaataggaactccctagatgggtcccaagaagagaaa
aagaaaaagaaaaggccgaaggtaaaaaaagatccgaaggaaccgaaagaacccaaggag
aaaaaagagcccaaggaacccaagaccccgaaagcccctaagattcccaaagagccaaag
gaaaagaaagcaaaaactgccacgccaaaacccaaatccagcaaaaagtcaagtaataag
aaacctgattcagaagcaagcgctttgaagaaaaaggtcaacaagggaaaaacagaaggt
tctgaaaattcagacttagacaaaacgcccccaccatctcctcctgaagaagatgaggac
ccaggtgttcagaagagacgttccagcaggcaggtgaagagaaagcgatacacggaagac
ttggagttcaagatttctgatgaggaggcagatgatgcagacactgctgggcgagactcc
ccctccaacacctcgcagtcggagcagcaggaatctgttgatgcagaaggtccagtggta
gaaaaaatcatgagcagtcgttcagtaaaaaaacagaaggactctggagaggaggtagaa
gttgaggaattctatgtgaaatacaaaaccttctcttatcttcattgtcaatgggcatct
gtagaagatctggaaaaagataagagaattcagcaaaagatcaaacggtttaaggcaaag
cagggccagaacaaattcctttcagagattgaagatgagctttttaatccagattatgtg
gaggttgaccggataatggactttgcacgtagcacagatgaacggggagagcctgtgact
cactacctggtgaaatggtgctccctgccttatgaggacagcacatgggagctaaggcag
gacatagatcaagcgaagatcgaagagtttgagaaactcatgtccagggagccagaaaca
gagcgtgtggagagacctcctgctgttgattggaagaaatcggagagttccagggagtac
aaaaacaataacaaactcagggaataccagttggagggagtaaactggctacttttcaat
tggtacaacatgcgaaactgcattttagcagatgaaatgggtttgggaaaaactatccag
tccattacatttctctatgagatatatttgaaaggaatccatggcccttttttagtaatt
gccccattgtccacaatccccaactgggaaagggaattccgtacctggacagagttgaac
gtggttgtgtatcatgggagtcaagctagtcgtcggaccattcagttgtatgaaatgtac
ttcaaagatccccagggtcgagtgataaaggggtcctataagtttcatgccatcatcact
acatttgagatgattttgacggattgtcctgagctgcggaatattccatggcgctgtgta
gtcattgatgaagcccacaggctgaagaataggaactgcaagctgctggaggggctcaag
atgatggacttggaacacaaagtgctgctgacagggaccccactacagaacactgtggaa
gagctcttcagcttgcttcatttcttggaaccaagtcgcttcccttcagaaaccaccttt
atgcaagaatttggtgatctcaaaacagaagaacaggtgcaaaaactccaggctattcta
aagccaatgatgttgcgacgtctcaaggaggatgtggaaaagaacttggcccccaaagaa
gaaactatcattgaagttgagctaacaaacattcagaagaaatattaccgagccatcctt
gagaagaatttcacatttctctccaaaggtggtggtcaagctaacgtacctaacctttta
aacactatgatggaattacggaagtgctgcaatcatccataccttattaacggtgctgaa
gagaaaattttggaagagtttaaagaaacacacaatgcagactctccagatttccagctc
caggcgatgatccaggctgctggcaagctcgtgctgattgacaagctgctgccaaaactg
aaggctggtggccacagggtgcttatcttttcccagatggtgcgctgcttggacatactg
gaagactacctcattcaaagacggtacccgtacgaaaggatcgacggcagagtgagaggg
aatctccgccaggcagctatcgacagattctccaaacctgattctgaccggtttgttttc
ctcctgtgtacaagggcgggaggtttaggcattaatcttactgctgctgatacctgcatc
atcttcgattccgactggaatccccaaaacgatctccaggctcaggctcgatgtcataga
ataggacagagcaaatctgtgaaaatctacaggctgattacgaggaattcttacgagagg
gaaatgttcgacaaggcgagtttgaagctcggcctggataaagctgtgttgcagtccatg
agtgggagagaaagcgctaccaatggggtacaacaactttccaagaaagaaatagaggat
ctgctacgaaaaggggcctacggtgcactcatggatgaggaagatgaagggtctaagttc
tgcgaagaagacatcgatcagattctcctgcggcgaacccacactatcaccattgagtct
gaagggaaaggttccacatttgctaaggccagttttgttgcatctggaaataggacagat
atttccttggatgatccaaatttctggcaaaagtgggctaagaaggctgaattggatatt
gatgccttaaatgggaggaacaacctggttattgacactccaagagtgaggaagcaaacc
aggctgtacagtgcagtgaaagaagacgagctgatggaattttcagacttggagagtgat
tctgaagagaagccttgcacaaagccacggcggccccaggacaggtcgcagggctacgca
cggagtgagtgcttcagagttgagaagaatctgctcgtctatggctggggacggtggaca
gatatcctttcccatggacgctacaagcgccagctcaccgagcaagacgtagaaaccatc
tgcagaaccatccttgtgtactgtctcaatcattacaagggcgatgagaatatcaaaagc
ttcatctgggacttgatcacgcccacggcggacggccagacgcgagccttggtcaatcac
tctggcttatcagccccagtgccaaggggaaggaaaggaaagaaggtgaaagcccagagc
acacatccagtggtgcaggatgccgactggctggcgggctgcaacccggacgccttgttc
caggaggacagctacaagaagcacctgaaacaccactgtaacaaggtcctgctgcgtgtc
cgcatgctgtactacctaaggcaagaagttataggagaccaggcagataagattttagag
ggtgctgactcaagtgaaactgatgtgtggatacctgaacccttccatgctgaggtcccc
acagactggtgggataaggaagcagataagtccctcctaattggagtgttcaaacacggc
tacgagaagtacaattccatgcgagctgaccccgcactgtgcttcctggaacgagttggt
atgcctgatgccaaggccatagctgccgagcaaagaggaacagacatgctagcagatggc
ggtgacgggggagaatttgatagagaagatgaagacccagaatataaaccaactaggacg
ccattcaaggatgaaatagatgaatttgcaaattctcctccagaagataaagaggactcc
atggaaatacgcgccacaggcaagcccagtgagagtactgctgagttaggccaactctac
tggcccaacacctcaaccctaactacccgtctgcgccggctcattactgcctatcagcgc
agctataaaaggcaacaaatgaggcaagaggctctaatgaagactgaccggcggaggcga
cggccccgggaggaagtgagagcgctagaagcggaaagggaagctataatatctgagaaa
cggcaaaagtggacaagaagagaagaggccgatttttaccgtgtggtgtctacgtttgga
gttatctttgaccccgtgaaacagcagtttgactggaaccaatttcgagcctttgccaga
cttgacaaaaagtctgatgagagtttggagaaatacttcagttgttttgtggccatgtgt
aggcgagtgtgtcgaatgcccgctaagccaggtgatgaaccacccgacctctcctccatg
atcgagccaatcacggaagagcgtgcctctagaactctctaccgcatcgagctgctgcgg
aaaatacgcgaacaggttcttcatcaccctcagctgggagagaggctgaagctctgccag
ccgagcttggatctgccagagtggtgggaatgtgggaggcatgaccgagacttgctggtt
ggtgctgctaaacacggggtcagtcggacggattatcacatcctcaatgaccccgagtta
tctttcttggatgcgcacaaaaactttgctcagaacagaggggccgggaacatgtcctcc
ctgaccccactggccattggatttggccagactcctgccgtcctctcgtctgctcacgtt
caggaagagaaggcgacaggacagagtgaaggcaaagcggaggagtctggaagcacggcc
gcccaagagaaagctgaggggaaggaagaggaggaagagactgacggcggggagaaggac
agtaagcagggatgtgaggccgaggccagctctgtaaaaagtgaactgaaagggatggag
gtcagtgcagatacagggcccaagtctatttcagaaaagggttctgaagaggacgaggaa
gaaaagctggaggatgacgataagtcagaggaatcttcccagcctgaagcaggagctgtc
tctagagggaagaactttgatgaggaaagcaatgcttccatgagcaccgctagggatgaa
acccgagatgggttctacatggaggatggagacccttcagtagctcagctccttcatgaa
agaacgtttgccttctcattttggcctaaggaccgagtaatgataaaccgattagacaac
atctgtgaagcagtgctgaaaggcaaatggccggtaaacaggcgccagatgtttgatttc
cagggcctcatccctggttacacgccacccaccatggacagccccctgcagaagaggagc
tttgccgagctctccatggtcggccaggctagcatcagtgggagcgaggacctcacgact
tctcctcagttgtcaaaggaagacgccctgaatctctctgtccctcgccaacggaggagg
agaaggagaaaaattgaaatcgaggccgaaagagctgccaagcggcggaacctcatggag
atggttgcccagctgcgggagtctcaggtggtctcagaaaatggacaagaaaaagttgta
gatttatcaaaggcctcaagagaggcagcaagctctacctcaaatttttcatctcttact
tcaaagtttatcttgcctaatgtctcgacaccggtgtctgatgcctttaagactcagatg
gagctgctccaggcaggcctgtcgcgcacacccacgaggcatctgcttaatggctcccta
gtggacggagagcctcccatgaagaggaggcggggaaggaggaaaaacgtggagggtctt
gatctgcttttcatgagccacaaacggacgtcattgagtgcagaggatgctgaggtgacc
aaagcttttgaggaagatatagagaccccacctacaagaaacattccttctccaggacag
ctggacccagacacgcggatccctgtgataaatcttgaagatgggactaggctggtgggg
gaggacgctcctaaaaataaggatttagttgaatggctgaagctgcatcctacttacact
gttgatatgccaagttatgtaccaaagaatgcggatgtgctgttttcctcatttcagaaa
ccgaaacagaaacgacatagatgtcgaaaccctaataaattggatataaacactttgaca
ggagaagaaagggtgcctgttgtcaataaacgaaatggaaagaagatgggtggagctatg
gcgcctccaatgaaggacctgcccaggtggctggaagaaaaccctgaatttgcagttgct
ccagactggactgagatagtgaagcagtctggctttgttcccgagtcgatgtttgaccgt
cttctcaccggccccgtggtgcggggggaaggggcgagcaggagaggacgaaggcccaaa
agtgagatcgccagggcagcggcggcggcggccgcggcggcctccacgtcaggcatcaac
cctctgctggtgaacagcctgttcgctggaatggacctcacgagccttcagaacctccag
aacctgcagtctctccagctggcagggctcatgggcttccctccgggactggccacggcg
gccgccgccggaggcgatgcgaagagcccggcagccgtgctgcccctgatgctgccgggc
atggcgggcctgcccaacgtgtttggcctgggcggcctgctgaacagcccgctctccgct
gctgctggcaccgccgccgcggcgcccgggcccggagacccagaagacggcgcttcgaaa
gcggaggagaagggcaacgagaacgaagaagagaacaaagactccgagaaaagcacagac
gctgtgtcagctactgactctgcgaatggatctgttggtgctgctactgccccggccgga
ttgccctccaacccactcgccttcaacccgttcctcctgtccaccatggcgccaggcctc
ttctacccatccatgtttctacctccaggactggggggattgacactgcctgggttcccc
gcgttagcaggactccagaacgccgtgggctccagcgaagaaaaggcccccgacaaggcc
gagggggctgccttccaggaagaggagaacctggagggcagcgacgccgaggagaacctg
gacaagactgcggagtcctccatcttcgaagacgaaatagcacagggtgaagagctggac
tcgctcgatgggggggacgaactagaaaacaatgaaaatgatgaataa
DBGET
integrated database retrieval system
