Ailuropoda melanoleuca (giant panda): 100479868
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Entry
100479868 CDS
T01329
Symbol
CALD1
Name
(RefSeq) caldesmon isoform X4
KO
K12327
caldesmon
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
100479868 (CALD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aml04812
]
100479868 (CALD1)
Cytoskeleton proteins [BR:
aml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
100479868 (CALD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
100479868
NCBI-ProteinID:
XP_019663759
Ensembl:
ENSAMEG00000016171
LinkDB
All DBs
Position
1:194698945..194880076
Genome browser
AA seq
744 aa
AA seq
DB search
MDDFERRRELRRQKREEMRLEAERIAYQRNDDDEEEAARERRRRARQERLRQKQEEESLG
QVTDQVEVNAQNSVADEEVKPSSSHTQAEGDDEAALLERLARREERRQKRLQEALERQRE
FDPTVTDAGVSLPSRRTQNDAAADSEAAEKEEKSERRQERYEVEETEIVTKSYQKNDWRD
AEEKKQEEKEKEEEEEEKPKQGSLEENQVEVTAEGGTPDTAAVPLETGQLSAEEPRTEEE
PERGSDEAAHNGRMETEGREQAEADRARLEAEERERIKAEQEQRVAEEQARREAEERAAA
QERERREAAERERVEQERRAAEERQRAKAEEEEKAKIEERKLRQLGENRSEVQEKKRKGE
KVDEKREGKWVNEKKVQEDKLQTAVQKKQEEEKGAKAQAQREKSQEDKPTFKKEIKDEKI
KKDKEPKEVKSFLDGKKGFTEVKSQNGEFMTHKLKHTENTFSRPGAGARGSEAKEAEGAS
QVEAGKRLEELRRRRGETESEEFEKLKQKQQEAAQELEELKKKREERRKVLEEEEQKRKQ
EEAERKVREEEEKRRLKEEIERRRAEAAEKRQKMPEDSLSDDKKPFKCFTPKGSSLKIEE
RAEFLNKSVQKSGVKSTHQAAVVSKIDSRLEQYTSAIEGTKTAKPLKPAASDLPVPAEGV
RNIKSMWEKGNVFSSPAGSGTPNKETAGLKVGVSSRINEWLTKTPDGNKSPAPKPSDLRP
GDVSGKRNLWEKQSVDKVTSPTKV
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggatgattttgaacgtcgcagagaactcaggaggcaaaagcgggaagagatgcgcctt
gaagcagaaaggatcgcctaccagaggaacgatgacgatgaggaagaggccgcccgagaa
aggcgccgccgcgcccggcaggagaggctgcggcagaagcaggaggaagaatccttgggg
caggtgactgaccaggtggaggtgaatgcccagaacagcgtggccgacgaggaggtgaag
ccaagctcctcgcacacgcaggcggagggcgacgacgaggctgcgctcctggagcgcctg
gctcggcgcgaggagagacgccagaagcggcttcaggaagccctggagcggcagagggag
ttcgaccccacggtcacggacgcgggcgtgtcactccccagcagaaggacgcagaacgac
gccgccgccgacagcgaggccgccgagaaggaagaaaagagcgagcggcgccaagaaaga
tacgaggtcgaggagacggaaatcgtcaccaagtcctatcagaagaacgactggagggac
gctgaggagaaaaagcaggaggaaaaggaaaaggaggaagaggaggaagagaagccaaag
caagggagcctggaagaaaatcaggtagaggtgacggcagaaggcggaacaccagacaca
gcggctgtgccgttggaaacggggcagctcagtgcagaagagcctagaacagaggaggag
ccggagcggggttcagatgaggccgcccacaatggcaggatggagacagaagggagggaa
caagcggaggcagacagggccaggctggaagcggaagaaagagaaaggattaaagcggag
caagagcagagggtagcggaggagcaagcaaggcgggaagcagaagaaagggcggctgca
caggagagagagaggagggaggcggccgagagggagagggttgagcaagagagaagagct
gcggaggagaggcagcgggcaaaggcagaggaagaggagaaagctaagatagaagagcgg
aagcttcggcagctaggagagaacaggagcgaagtgcaagagaaaaagcgcaaaggggaa
aaggtagacgagaaaagagaagggaaatgggtaaatgaaaagaaagtacaagaagataaa
cttcagacagccgtgcaaaagaaacaggaagaagaaaagggggccaaagcacaagctcaa
agagaaaagtcccaagaagacaaacctaccttcaaaaaagagatcaaagatgagaagatt
aaaaaggacaaagagcccaaagaagtgaagagcttcttggatggaaaaaagggatttaca
gaagtgaagtcacagaatggagaattcatgacccacaaacttaaacacaccgagaatact
ttcagccgccctggagcgggagcaaggggcagcgaggccaaggaggcggagggcgcttcg
caggtggaggccggcaaacgtctggaggagcttcgccgtcgccgcggggaaaccgagagc
gaggagttcgagaagctcaaacagaagcagcaggaggcggcccaggagctggaggagctg
aagaaaaagcgggaggagcgaaggaaggtcctggaggaggaagagcagaagcggaagcag
gaggaagccgagagaaaagtcagagaggaggaagagaagaggaggctaaaggaagagatt
gaaaggcgacgggcggaagctgctgagaaacgtcagaagatgcccgaagacagcttatca
gatgacaagaagccattcaagtgtttcactcccaaaggttcatctctcaagatagaagag
cgagcagaatttttgaataagtctgtgcagaaaagtggtgtcaaatcaactcatcaagca
gcagtcgtctccaagattgacagcagactggagcagtacaccagtgcaattgagggaaca
aaaaccgcaaaacctctgaagccagcagcctcggatcttcctgttcctgctgaaggtgtc
cgcaatatcaagagcatgtgggagaaagggaatgtgttctcatcccccgctgggtcaggc
acaccaaataaggagactgctggcttgaaggtgggggtttccagccgcatcaatgaatgg
ctcactaaaaccccagatggaaataagtcacccgctcccaaaccttctgatttgaggcca
ggagacgtatctggcaagcggaacctctgggaaaagcaatctgtggacaaggtcacttct
cccactaaggtttga
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