Ailuropoda melanoleuca (giant panda): 100479895
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Entry
100479895 CDS
T01329
Symbol
COMP
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04145
Phagosome
aml04151
PI3K-Akt signaling pathway
aml04510
Focal adhesion
aml04512
ECM-receptor interaction
aml04820
Cytoskeleton in muscle cells
aml05144
Malaria
aml05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100479895 (COMP)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100479895 (COMP)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100479895 (COMP)
09144 Cellular community - eukaryotes
04510 Focal adhesion
100479895 (COMP)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100479895 (COMP)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100479895 (COMP)
09174 Infectious disease: parasitic
05144 Malaria
100479895 (COMP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100479895 (COMP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aml04147
]
100479895 (COMP)
00536 Glycosaminoglycan binding proteins [BR:
aml00536
]
100479895 (COMP)
Membrane trafficking [BR:
aml04131
]
Endocytosis
Phagocytosis
Opsonins
100479895 (COMP)
Exosome [BR:
aml04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100479895 (COMP)
Exosomal proteins of colorectal cancer cells
100479895 (COMP)
Exosomal proteins of bladder cancer cells
100479895 (COMP)
Glycosaminoglycan binding proteins [BR:
aml00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100479895 (COMP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
100479895
NCBI-ProteinID:
XP_002912782
Ensembl:
ENSAMEG00000011419
UniProt:
D2GV41
LinkDB
All DBs
Position
4:complement(13703843..13711953)
Genome browser
AA seq
770 aa
AA seq
DB search
MGSREQAAVQLPVAMVPATACVLLLTLAVLGASGQGQISLGADLGPQMLRELQETNAALQ
DVRELLRQQVKEITFLKNTVMECDACGMQPVRTPGLSVRPLSQCAPGFCYPGVVCTQTPS
GARCGPCPAGFTGNGSHCTDVNECNAHPCFPRVRCINTSPGFRCEACPPGYSGPAHEGVG
LAFAKANKQVCTDINECETGQHNCVPNSVCVNTQGSFQCGPCQPGFVGDQTSGCKRRSQR
SCPDGTPSPCHEKADCVLERDGSRSCVCAVGWAGNGLLCGRDTDLDGFPDEKLRCSERQC
RKDNCVTVPNSGQEDVDRDGIGDACDPDADGDGVLNEQDNCKLVRNPDQRNADGDKWGDA
CDNCRNQKNDDQKDTDQDGKGDACDDDIDGDRIRNSVDNCPRVPNSDQKDSDGDGVGDAC
DNCPQKSNPDQGDVDHDFVGDACDSDQDQDGDGHQDSRDNCPTVPNSAQQDSDHDGQGDA
CDEDDDNDGVPDSQDNCRLVPNPNQEDLDRDGVGDACQGDFDADKVVDKIDVCPENAEVT
LTDFRAFQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFH
VNTVTDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSSTGPG
EQMRNALWHTGDTASQVRLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRVRFYEGPELVA
DSNVVLDTTMRGGRLGVFCFSQENIIWANLRYRCNDTIPEDYETQRLLQA
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcagagagcaagctgcagtccagctccccgtcgccatggttcctgccaccgcc
tgcgttctcctgctcaccctggccgtcctcggcgcgtcaggtcagggccagatatcacta
ggtgcagatctgggcccgcagatgcttcgggaacttcaggagaccaacgcggcgttgcag
gatgtgcgggagctgttacggcagcaggtcaaggagatcacgtttctgaaaaatacagtg
atggagtgtgatgcgtgcgggatgcagcccgtgcgcaccccgggtctgagcgtgcggccc
ctatcccagtgcgcgcccggcttctgctacccaggcgtggtctgcactcagacgccgagc
ggcgcgcgctgtggaccctgtcccgcgggcttcactggcaatggctcgcactgcaccgac
gtcaacgagtgcaacgcccatccctgcttcccccgcgtccgctgcatcaacaccagcccc
ggcttccgctgcgaggcttgcccgccggggtacagcggccccgctcacgagggcgtgggg
ctggccttcgccaaggccaacaaacaggtttgcacggacattaacgaatgtgagacaggg
cagcataactgcgttcccaactccgtgtgcgtcaatacccagggctccttccagtgcggc
ccttgccagcccggcttcgtaggcgaccagacatctggctgcaagcggcgctcacagcgc
tcctgccccgacggcacgcccagcccgtgccacgagaaggccgactgcgttctggaacgc
gatggctcgcgatcgtgcgtatgcgccgttggctgggcaggcaacgggctcctctgcggc
cgagacacggatttggacggcttccccgacgagaagcttcgctgctcggaacgccagtgc
cgtaaggacaactgtgtgacggtgcccaattcagggcaagaggacgtggatcgcgacggc
atcggagacgcctgcgatccggatgccgatggggacggggtcctcaacgagcaggacaac
tgtaagctggtgcggaacccagaccagcgcaatgcggacggtgacaagtggggtgatgct
tgcgacaactgccggaaccagaagaacgacgaccaaaaggacacagatcaggacggcaaa
ggcgatgcctgcgacgacgacatcgacggcgaccggatccgaaattcggtggacaactgc
ccaagggtgcccaactcagaccagaaggacagcgatggtgatggtgtgggggatgcctgt
gacaactgtccccagaaaagcaacccagaccagggggatgtagaccacgactttgtggga
gacgcttgcgacagcgaccaagaccaggatggggatgggcaccaggactcacgggacaac
tgccctacagtaccaaatagtgcccagcaggattcagaccacgatggccagggtgacgcc
tgcgacgaggatgacgacaacgacggggtccccgacagtcaggacaactgtcgcctggtg
cccaacccaaaccaggaagacctagaccgtgatggagtgggcgacgcgtgccagggcgac
ttcgacgcggacaaggtagtggacaagattgatgtgtgtccggagaacgccgaggtcacc
ctcaccgacttccgggccttccagactgtcgtactggaccccgagggcgacgcgcagata
gatcccaactgggtggtgctcaaccagggtatggagatcgtgcagacgatgaacagcgac
cctggcctggctgtgggctatacggccttcaatggcgtggacttcgaaggcacgttccac
gtgaacacggtcacagatgacgactatgcgggcttcatctttggctaccaggacagctcc
agcttttatgtggttatgtggaagcagatggagcagacgtactggcaggccaatcccttc
cgcgcggtagccgaacccggcattcagctcaaggctgtgaagtcctccacaggccctggg
gagcagatgcggaacgcgctctggcacacaggggacacagcatcacaggtgcggctgctg
tggaaggacccccgcaacgtgggttggaaggacaagacatcctaccgctggttcctgcag
caccggccccaagtgggctacatcagagtgcggttctacgagggccctgagctggtggct
gacagcaacgtggtcctggacacaaccatgcggggtggccgcctgggggtcttttgcttc
tcccaagagaacatcatctgggccaatctacgctaccgatgcaacgacaccatcccagag
gactacgagactcagaggctgctgcaggcctag
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