Ailuropoda melanoleuca (giant panda): 100479967
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Entry
100479967 CDS
T01329
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100479967 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100479967 (DCP1B)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100479967 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
100479967 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
100479967
NCBI-ProteinID:
XP_002914167
Ensembl:
ENSAMEG00000004141
UniProt:
A0A7N5KCM3
LinkDB
All DBs
Position
16:1734401..1789048
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AA seq
612 aa
AA seq
DB search
MAAVAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLF
VYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEEC
QRIAELMKNLTQYEQLKAHQGGGTGNSPMILNSGEGKEVDIVRMLTKAKDEYTKCKTCSE
PKQITSSSAIYDNPNLIKPIPVKPSENQQQRIPRPSQTVDPEPQHLSLTALFGKQDKSPC
QETVGSPQTIQQLQRQEPLPMRQGVVRSLSYEEPRRHSPPIEKQLCPAIQKLMVRSADLH
PLSELPENRPCRNGNTHSAGEVFLGPVQPGSPHSIGTSQRVQSASRTQSLLEKLQNAPRP
AHKYDPSTPAPASSAAPNLSTALATATPGAPVKGLAQAQAGYFSASLPAPTLGHQACGKE
PSAHPRPALPHSGSQTGSSGVISPQELLKKLQVVQQEQQLHAPNRPALAAKFPVVTQSSR
AGQALESWMDKTAGTEKQTPLFQATSPPHVPAPWAPSLLMSPMVFTQPTCAPPKERDGGL
LPLGSQEPAATSTSLLLPLPTPEPPVITSSPLTKRQLQEALLYLIQNDDNFLNIIYEAYL
FSMTQAAMKKTM
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgtggcggcgggcggcctggtgggaaaggggcgcgacatcagcctggccgcc
ctgcagcgccacgacccctatatcaaccgcatcgtggacgtggccagccaggtggctctg
tacactttcggccatcgggccaacgagtgggaaaagactgatgtggaaggaaccttattt
gtttacacaaggtctgcttctccaaagcatgggttcaccattatgaataggttgagcatg
gaaaacaggacagaacccattactaaagacctggatttccagctccaggatcctttcctt
ctctacagaaatgccagattgtccatttatgggatttggttttacgataaagaagaatgc
caaagaattgcagagcttatgaaaaacctaactcaatatgaacagttgaaagcccatcag
ggaggtggaacaggaaactccccaatgatcctcaattcaggagagggcaaggaagtagat
atcgtacgaatgctcaccaaggccaaagatgaatacaccaagtgtaaaacctgttctgaa
ccaaaacagataaccagttcatctgccatctatgacaaccccaatctcatcaaaccaatt
ccagtgaagcccagtgaaaaccagcaacagcgcatacctcgacccagccagaccgtagac
cccgagccccagcacttgtccttgacagctctctttgggaagcaggacaagtctccgtgt
caggagaccgtggggtccccacagaccatccagcagctgcagcggcaggagccacttccc
atgaggcagggagttgtacgctccctctcctatgaggaacccagaagacactcacccccc
atcgagaagcagctctgtccagccattcagaaactcatggtcaggagcgcagacctccac
ccgttgtcagagctgcctgaaaaccggccctgcagaaatggcaatacccattctgcgggg
gaggtttttctgggacctgtgcaaccagggtctccccatagcattgggacttctcagcgt
gtacaaagtgcttccagaactcagagccttttggagaagcttcagaatgccccgaggcca
gcacataagtatgaccctagcactccagcacctgccagctcagctgccccgaacctcagc
accgctctcgccactgccacccctggtgccccagtaaaggggctggctcaggcgcaggcg
gggtatttcagtgcctcccttccagctccgacactaggacatcaggcttgtggaaaggag
ccgtcggcacacccaagacccgcgctcccccactctggcagtcagactggcagttctggg
gtgatctccccccaggagttactgaagaagctccaggtcgtacagcaggagcagcagctg
cacgcaccgaaccggccggccttggcagccaagtttccggtggtgactcagagctccaga
gcagggcaagccctggagtcctggatggacaagacagctggcacagaaaagcagacccct
ctttttcaggccacctcgcctccgcacgtcccggccccatgggctccttctctgctcatg
tcccccatggtgttcacacaacccacctgcgccccaccgaaggagcgggatggtgggctc
ttgcccctgggaagccaagaaccagctgccacttccaccagcctcctcctgcctctgccg
accccggagccccccgtgatcaccagcagcccacttaccaagagacaactgcaggaagca
ctgctgtacctcattcagaacgatgacaacttcttaaatatcatctacgaagcttatctc
ttcagcatgacacaagcagccatgaaaaagacgatgtga
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