Ailuropoda melanoleuca (giant panda): 100480159
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Entry
100480159 CDS
T01329
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aml03009
]
100480159 (RRP12)
Ribosome biogenesis [BR:
aml03009
]
Eukaryotic type
90S particles
Other 90S particles
100480159 (RRP12)
Pre-60S particles
Other pre-60S particles
100480159 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
DUF6031
Motif
Other DBs
NCBI-GeneID:
100480159
NCBI-ProteinID:
XP_002917032
Ensembl:
ENSAMEG00000000134
UniProt:
D2H5L2
LinkDB
All DBs
Position
6:complement(99221734..99249916)
Genome browser
AA seq
1298 aa
AA seq
DB search
MGRSGKLPSGVSAKLKRWKKGHSSDSNPAICRHRQAARSRFFSRPSGKSDLTVDAVKLHN
ELQSGSLRLGKSEAPETAMEEEEAPALTEKSSGTFLSGLSDCTNVTFSKVQRFWESNSAA
HKEICAVLAAVTEVIRSQGGKETETEYFAALMTTVEAVESPESLAAVAYLLNLVLKRVPS
PVLIKKFSDTSKAFMDIMSAQTNSGSTSALRWVLSCLATLLRKQDLEAWGYPVTLQVYHG
LLSFTVHPKPKIRKAAQHGVCSVLKGSEFMFGEKAPAHHPASVSTAKFCIQEIEKAGGSK
EATTALHMLTLLKDVLPCFPEGLVKSCSETLLRVMTLSHVLVTACAMQAFHSLFHAKPSL
GTLSAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAHINLVRLQRDLGLGHLPRFFGT
ATTCLLSPHSQVVTAATQSLQEILKECVAPHMASIGSVTSSASGPAQYVSKMFRAVEEGL
TYKFHAAWSCVLQLLCVFFQACGKQAHPVMKKCLQSLCDLRLSPHFPHTAALDQAVGAAV
ASMGPEVVLEAVPLEIDGSEENLDFPRSWLLPVIRDHVRETRLGFFTTYFLPLATTLKSK
AMDLAQAGRTVESKIYDTLQWQIWTLLPGFCTRPTDVAASFKGLARTLGTAISERPDLRV
TVCQALRTLITKGCEAEADRVEVSRFAKNFLPILFNLYGQPVAAGDTPAPRRAVLETVKT
YLTITDPQLVNSFLEKASEKVLDSTSSDFTRLSVLDLVVALAPHADEAAISRLYFTIRPY
LESKAHGVQKKAYRVLEEVCASPQGPGARFVQNHLDDLKATLLDSLRSTSSPAKRPRLKC
LIHIVKKLSAEHEEFITALVPEVILCTKEVSVGARKNAFALLVEMGHAFLRFGPNQEEAL
QRYLVLLYPGLVGAVTMVSCSILALTHLLFEFKGLMGTSTIEQLLENVCLLLASRTRDVV
KSALGFIKVAVVVMDVAHLAKHAPLVMEAIGKLSDDMRRHFRMKLRNLFTKFIRKFGFEL
VKGLLPEEYHRVLVNIRKAEARARRHRALSQAAMDEEQQEEDEEPAQGKGDSIEEILADS
EEDEEEEERSQAKERRRLARQRGQAWLKEGGGDEPLNFLDPKVAQRVLATQPGPGRGRKD
HGFKVSADGRLIIREEEEDDAATAKTEEEEGTKGEDEEMADVMEDMGVRSKKHQKLKHQK
EADDEELEMPPRYQAGGSGIHRPVAKKATPGAEYKAKKAKGDVKKKGRLDPYAYIPLNRT
KLNRRKKVKLQGQFKGLVKAAQRGSQVGHKLRRKDRRP
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgctcggggaaattaccctccggtgtctcggccaagttgaaacgctggaagaaa
ggccatagtagcgacagcaatcctgccatctgccgccaccgccaggccgcccgcagccgc
ttcttcagccggccctcaggaaaaagtgacctgacagttgatgcggtgaagttgcataat
gagcttcagtccgggtccctgcgtctgggcaaaagcgaagcccctgagacggctatggaa
gaagaggaggcccccgctctcacggagaagtcctcgggcaccttcctgagcggcctctcg
gactgcacaaatgtcaccttcagcaaagtgcaacgcttctgggagtccaactccgctgcc
cacaaggagatctgtgctgttctggctgccgtcaccgaggtgattcgctcccagggaggg
aaggagacagagactgagtacttcgctgcgctgatgacaacagtggaggcagtggagtcc
cccgagtcgctggctgctgtcgcttacctgctgaaccttgtcctgaagcgcgtgcccagc
cctgtgctcattaagaagttttccgatacgtctaaagccttcatggacatcatgtcggcc
cagaccaacagtggctccacctctgccctccgatgggtcctctcctgtctggccaccctt
ctgcggaagcaggacctggaggcctggggctatcccgtgaccctgcaggtgtaccatggg
ctgctgagcttcacggtgcacccgaagcccaagatccggaaggctgcccagcatggcgtg
tgctcggtcctcaagggcagtgagttcatgttcggtgaaaaagcgcctgcccatcatcct
gcttccgtttccaccgccaagttctgcatccaggagattgagaaggctggaggctccaag
gaggccaccaccgcgctgcacatgctgacgctactgaaggacgtgctgccctgcttcccg
gaaggcctggtgaagagctgcagcgagactctcctcagggtcatgaccttgagccacgtg
ttggtgacagcctgtgccatgcaggccttccacagcctcttccacgccaagcccagcctg
ggcaccctgtcagcggagctcaatgcccagatcatcacggccttatatgactacgttccc
agtgagaatgacttacaacccctgctggcctggcttaaggtcatggagaaagcccacatc
aacctggtcagactgcagcgggacctggggctgggccacctccctcgcttctttggaact
gcaaccacctgcctcctttccccgcactcgcaggtggtgacagctgccactcagagcctt
caggagatcctgaaggaatgtgtcgctccccacatggccagcattggctctgtgacctct
tcagcctccggtcctgcccagtatgtctccaagatgttcagggcagtggaggaaggcctg
acgtacaaattccacgcggcgtggagctgcgtgttgcagctgctgtgtgtcttcttccag
gcatgtgggaagcaggcccatcctgtgatgaagaagtgcctccagtccctgtgtgacctg
cgcctctccccccatttccctcacacagcagcgctggatcaggcagtgggggccgcggtg
gccagcatgggccctgaggtggttttagaggctgtgcctttggaaattgatggctctgag
gagaatctggatttcccacggagctggctgctgcctgtcatccgggaccacgtccgggaa
acgcgacttggtttcttcaccacctatttcttacccctggctaccaccctgaagagcaaa
gcaatggatctggcgcaggcgggcaggacggtggagtccaagatctacgatacgctccag
tggcagatctggaccctcctgcctgggttctgcacgaggcccacggacgtggccgcctcc
ttcaaagggctggcgcggacactgggcacagccatcagtgagcgcccggacctgagggtc
accgtgtgccaggccctgcgcaccctcatcaccaagggctgcgaggcggaggctgaccgt
gtggaggtgagccgttttgccaagaacttcctgccaatcctcttcaacctctatggtcag
cctgttgcagccggagacactccagcccctcgccgggcagtgctggaaactgtcaaaact
tacctgaccattacagaccctcagttggtgaacagcttcctggaaaaagccagtgagaag
gttctggactccactagctctgacttcaccagactctctgtgttggacctggttgtggcc
ttggcgcctcacgcggatgaagctgccatcagcaggctgtacttcaccatccggccctac
ctagagagcaaggcccacggagtacagaagaaggcctaccgggtgctggaggaggtgtgc
gccagcccccagggccccggggcccgcttcgtgcagaaccacctggacgacctgaaggcg
accctgctggactcgctgcggagcacttcctcgcctgccaagaggccccgtttgaagtgc
ctcatacatatcgtgaagaagctgtcagctgagcatgaggagttcatcactgccctcgtc
ccggaggtgatcctgtgtaccaaggaggtgtcggtgggtgctcggaagaacgcttttgcc
ctgctggtggagatgggccatgctttccttcggtttggcccaaaccaagaagaggcactg
caacgttacctcgtcctgctctaccctggcctcgtgggagctgtgaccatggtcagctgc
agcatcctggccctgacccacctcctgtttgagtttaaaggtctcatggggaccagcaca
atagagcagctgctggagaacgtgtgcttgctcttggcttcccgcacccgcgacgtggtc
aagtcagcactgggcttcatcaaggtggcagtggtcgtcatggatgtggcgcacctggcc
aagcacgcgccgctggtgatggaagctatcgggaagctttcagacgacatgcggcggcac
ttccgcatgaagcttcggaacctgttcaccaagttcatccgcaagttcgggtttgagctg
gtgaaggggctgctgcctgaggagtaccacagagtcctggtaaacattcggaaagccgag
gcccgcgccaggaggcaccgtgctctgagccaggctgccatggacgaggagcagcaggag
gaggacgaggagcctgcccagggcaaaggcgacagcatcgaggagattttggccgactcg
gaggaggacgaggaggaggaggaaaggagccaggccaaggagcgccggaggctggcccga
cagaggggccaggcgtggctgaaggaggggggcggggatgagcccctcaacttcctggac
cctaaggtggcccagcgggtcctagccacacagcccgggcccggccggggcaggaaggac
cacggcttcaaggtgagcgccgatggccgcctcatcatccgggaggaggaggaggacgat
gctgccacagcgaagacggaggaagaggaaggcacgaaaggggaagatgaagagatggct
gacgtgatggaagacatgggtgtcaggagtaagaaacaccagaagctcaagcatcagaag
gaggctgacgacgaggagctggagatgcctcctcgataccaagctggaggctctggcatc
catcgtcctgtggccaagaaggccacgcctggggctgaatacaaagccaagaaagcaaag
ggtgacgtgaagaagaaaggtcggctcgacccctatgcctacatccctctcaacagaacc
aagctcaaccgcaggaagaaggtgaagctgcagggacagtttaaaggcctggtgaaagct
gcccagcggggatcccaggtgggacacaaactccgcagaaaggatcgtcggccctga
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