Ailuropoda melanoleuca (giant panda): 100480195
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Entry
100480195 CDS
T01329
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04151
PI3K-Akt signaling pathway
aml04510
Focal adhesion
aml04512
ECM-receptor interaction
aml04820
Cytoskeleton in muscle cells
aml04926
Relaxin signaling pathway
aml04933
AGE-RAGE signaling pathway in diabetic complications
aml04974
Protein digestion and absorption
aml05146
Amoebiasis
aml05165
Human papillomavirus infection
aml05200
Pathways in cancer
aml05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100480195 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100480195 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100480195 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100480195 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100480195 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
100480195 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100480195 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
100480195 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100480195 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
100480195 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100480195 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aml04147
]
100480195 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
aml00536
]
100480195 (COL4A5)
Exosome [BR:
aml04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100480195 (COL4A5)
Glycosaminoglycan binding proteins [BR:
aml00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100480195 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100480195
NCBI-ProteinID:
XP_002925629
Ensembl:
ENSAMEG00000012067
UniProt:
G1M069
LinkDB
All DBs
Position
X:75119211..75343802
Genome browser
AA seq
1691 aa
AA seq
DB search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NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagccagcctggctgccggcttgttcttactggccctgagtctttgg
gggcagcctgcagaggctgcggcttgctatgggtgttctccaggatcaaaatgtgactgt
actggtgtaaaaggagaaaagggggagagaggatttccaggtttggaaggccatccaggt
ttgcctggatttccaggtccagaagggcctccaggacctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaagggatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggggccccaggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttcct
ggtttacagggtcctccaggacctcctgggatcccaggtttgaagggagaaccaggcagt
ataattatgtcatcactgccaggaccaaagggtaatccaggatatccaggtcctcctgga
atacaaggcccagctggtcccactggtttaccagggccaattggtcccccaggaccacca
ggtttgatgggccctcctggtccaccaggacttccaggaccaaaggggaatatgggctta
aatttccagggacccaagggtgaaaagggtgagcaaggtcttcagggcccccctgggcca
cctgggcagatcagtgaacagaaaagaccaattgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccgagggcctcctggacctccagggatacgtggtcctccaggtcct
ccaggtggtgtgaaaggtgagaagggtgagcaaggagagcctggcaaaagaggtaaaccg
ggcaaagatggagagaatggccaaccaggaattccaggtttgcctggtaatcctggttac
cctggtgaaccaggaagggatggagaaaagggccaaaaaggtgacattggcccaactggg
cctcctggacttgtgattcctaggcctgagaccggtgtaactgtaggagaaaaaggaaac
attgggttacctggcttgcctggagaaaaaggagaacgaggatttcctggaatacaaggt
ccacctggtcttccaggacctccaggaactgcagttacaggtcctcctggcccccctggc
tttcctggagaaaggggccagaaaggtgatgaaggtccacctggaatttctattcctgga
tctcctggacttgatggacagcctggggctcctggacttccagggcctcctggccctcct
ggccctcacatccctcctagtgatgagatatgtgaagcaggccctccaggccctccggga
tctccaggtgatagaggactccaaggagaacaaggagtgaaaggtgacaaaggtgacacc
tgcttcaactgtattggaactggtgtttcagggcctccgggtcaacctggtctgccaggt
cttccaggtcctccaggatctcttggtttccctggacagaagggagaaaaaggacatgct
ggtctaaccggtcccaaaggattaacaggcataccaggagctccagggcctccaggcttt
cctggatctaaaggtgatcctggtgacatcctcacttttccaggaatgaagggtgacaaa
ggagagttgggttccccaggagcccctgggcttcctggtttacccggtacccctggacag
gatggactgccagggcttcctggccccaaaggagaacctggtggaattgcttttaagggt
gaaagaggtccccctgggaatccaggcttgccaggtctcccagggaatagggggcctatg
ggccctgtgggttttggccctccaggcccagtaggtgaaaaaggcatacaaggtgtagca
ggaaatccaggccagccaggaataccaggtcctaaaggtgatccaggtcagaccataacc
cagccagggaagcctggcctgcctggtaacccaggcagagatggtgaagtaggtcttcca
ggtgaccctggacttcccggccagccaggcttgccaggaatacctggtagtaaaggagaa
ccaggtatccctggaattgggcttcctggaccacctggtcccaaaggttttcctggaatt
ccaggacctccaggagcacctgggacacctggaagaattggtctagaagggccttctggg
ccaccaggctttccaggaccgaagggagaacctggacttgggctgcctgggccacctgga
cccccaggactcccaggtttcaaaggaacacttggtccaaaaggggatcgtggtttccca
ggacctccaggtcttccaggacgcactggcttggatgggctccctggaccaaaaggtgat
gttgggccaaacggacaacctgggccaatgggacctcctgggcttccaggaataggtgtt
cagggaccaccagggccaccggggattcctggaccagtaggacaacctggcctgcatgga
ataccaggagagaagggagatccagggcctcctgggtttgatgttccaggaccccctgga
gagagaggcagtccagggattcctggagcacctggtcctgtggggcccccaggaacacca
gggcttccaggaaaagcaggtgcctctggatttccaggtgccaaaggtgaaatgggtatg
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtgttcctggt
ctcaaaggtgatgatggtttgcagggtcacccaggacctcctggccctgcaggagaaaaa
ggtggtaaaggagagcctggccttccaggccctcctggaccagtggatccagatctgctg
ggctcaaaaggagagaaaggggaccctggcttaccaggtattcctggagtttcagggcca
aaaggttaccagggtttgcctggagacccagggcaacctggactgagtggacaacctgga
ttaccaggaccatcaggtcccaaaggtaaccctggtctccctgggaagccaggacttaca
ggacctcctggacttaaaggaagcataggggacatgggttttccaggacctcagggtgtg
aaagggtctcccggacctcctggagttcctggacaacctggctccccaggattacctgga
cagaaaggagaaaaaggtgatcctggtgtttcaggcattggtctcccaggtcttcccggc
ccaaagggtgaacctggtctgcctggatacccaggaaaccctggaatcaaaggttctagg
ggagatactggtttgcctggattaccagggacccctggagcaaaaggacaaccaggcctt
cctggattccctggaaccccaggacttcctggagcaaaaggtattaatggtcctcctggg
aaccctggccttccaggagaacctggtcctgtaggtggaggaggtcgtcctggaccacca
gggcctccaggtgaaaaaggcaacccaggtcaagatggtattcctggaccagctggacag
aagggtgaaccaggtcaaccgggctttggaatcccaggaccccccggactcccaggactt
tctggtcaaaagggtgatggaggattacctggcattccaggaaaccctggccttcctggt
ccaaagggagaaccaggctttcagggtttccctggtgtgcaaggtcccccaggccctcct
ggttctccaggtccagctctggaaggccctaaaggcaaccctgggccccagggtcctcct
gggagaccaggtcctccaggttttcaaggtctaccaggtccagaaggtccccgaggtctc
cctggaaatggaggtattaaaggagagagaggaaacccaggccaacctgggcaacctggt
ttgcctggtttgaaaggagatcaagggccaccaggacaacagggtaatcctggtcgacca
ggtctcaatggaatgaaaggagatcctggtctccctggtgttccaggatttccaggcatg
aagggacccagtggaatacctggttcagctggccctgagggggatccaggacttgttggt
cccccaggtccccctggattacctggtccttcaggacagagtattataatcaaaggagat
gttggtccaccagggatcccaggccagcctggattaaaaggtctaccaggactaccagga
cctcaaggcttaccaggtccaattggccctccaggagatccggggcgcaatggactccct
ggctttgatggtgcaggagggcgcaaaggagacccaggtctgccaggccagccaggtacc
cgtggtttggatggtccccctggaccagatggaatgcaaggtcccccaggtcctccagga
acttcctctattgctcatggattcctcatcacacgtcacagccagacaacagatgcacca
caatgcccacatggaactgtgcaaatttatgaaggcttttctctcctgtatgttcaagga
aataaaagagctcatggtcaagacttggggacggctggcagctgccttcgtcgcttcagt
accatgcctttcatgttctgcaacatcaataacatttgcaactttgcttcaagaaatgac
tattcttactggctgtccaccccagagcccatgccaatgagcatggagcccctgaagggc
cagagcatccagccatttattagtcgatgtgcagtatgtgaagctccagccatggtgatc
gcagttcacagtcagaccatccagattccccgttgtcctcagggatgggattctctctgg
attggctattctttcatgatgcacacaagcgcaggagcagagggctcaggccaagccttg
gcctcccctggttcctgcttggaagagtttcgttcagctcccttcattgaatgtcatggg
cggggtacctgcaactactatgccaactcctacagcttttggctagcaactgtagatgtg
tcagacatgttcagcaaacctcagtcggaaacactgaaagcaggagacttgaggacacgt
attagccgatgtcaagtgtgcatgaagaggacataa
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integrated database retrieval system
