Ailuropoda melanoleuca (giant panda): 100480202
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Entry
100480202 CDS
T01329
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X8
KO
K06084
F-box protein 20
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100480202 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100480202 (LMO7)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
100480202 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_2
PDZ_6
PRCH
Motif
Other DBs
NCBI-GeneID:
100480202
NCBI-ProteinID:
XP_011232636
Ensembl:
ENSAMEG00000011427
LinkDB
All DBs
Position
7:109940172..110135370
Genome browser
AA seq
1616 aa
AA seq
DB search
MEEPGADCAVAFAEAQRWVEAVTEKNFETKDFRASLENGVLLCDLVNKLKPGVIKKINRL
STPIAGLDNINVFLKACEQIGLKEAQLFHPGDLQDLSNRVTVRQEETDRRVKNVLITLYW
LGRKAQSNPYYNGPYLNLKAFENLLGQALTKALEDSSCLKRSGRDSGYGDIWCAERGEFP
TSPGNRKREDSFESLDSLGSRSFTSCSSDITLRGGREGCESDTDSEFTSKMQDYNKDDMS
YRRISAIEPKSALPFNRFLPSKSRQPSYVPAPLRKKKPDKNEDNRRSWASPVYPEADGTF
PSNERRTWGTNVKNWPTVQQTSNSSCYLEEEEEKTHIPNTVKDDLYVRKLSPITPNPGNA
FDQFLPKCWIPEDVNWKRIKRETYKPWYKEFQGFSQFLLLQALQTYSDDILSSETNIRID
PTAGPRLITRRKNLSSAPGYKRDDLEMSTLDPDLENDDFFVRKTGAFHANPYVLRAFEDF
RRFSEHEDPVERDIILQCREGDLVLPDLEKDDMIVRRIPAQKKEVPLSGAPDRYQPVPFP
EPWTLPPEIQAKFLCVLERTCPSKEKRKSCRVLVPSHRQKKDDMLTRKIQSWQLGTTVPP
VSFMPGPCSEADLRKWEAIREASRLRHKKRLLVERLFQKIYGENGSKSMSDVSAEDIQNL
RQLRYEEMQKIKSQLKEQDQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQALEKSER
SSKTFKEMLQDRESRGQMSTVTSRRRLHSSDDVLNEEMLSPTLTTSEASYQSERVEEKGT
VYSTEIPKQDSTTFAKREDAVTADLQLPSKSSMEEQLPDSLSSQHSLTTQTESTRVSASL
PRSYQKTDTARLTSVVTPRPFGSQARGISSLPRSYTMDDAWKYNGGVEDARRTHSSLVST
SVQKLDIGQLVSSKSSERERAALGEGVMGLPSPTSSFSSLSLDQAATSKATLSSTSGPDL
TSEFGEGGGSPQAEVSRSQDQFSDMRISINQTPGSGLDFGFTVKWAFSGIFVASVEAGSP
AEFSQLQVDDEIIAINNTKFSYKDTKEWEATMANAKETGNLVMDIRRYGKSGSPETKWID
TTSGIYNSDKSSSLSITTDFSESLQHSNTESKEMNGIRDESTTFESRASEPISLKNLKRR
SQFFEQGSSDSVVPDLPVPTLSAPSRWAWDQEEARKRQERWQKEQDRLLQEKYQREQEKL
REEWQRAKQEAERENYKYLNEELMVLSSNSISLPTREPAIATLEASWGEGSKSSDREGTR
AGEEERRQQPKEGAEEDQRKKLQEQLTLEKERKLKEQRYQEEQEQKRRQEEAQEQKRQAE
RERETSVKIYQYRRPVDSYDIPKREEKSSGLLPSDRNKSRSTTELDGYPTNKNGGNKYLD
QVGSTSSAQRSSKKEQVPSEAELERQQILQEMRKRTSLLNDNSWIRQRSSSVTKEPICLP
GIMRRGESLDNLDSPRSNSWKPSPWLNQPSGVHASSSVQDFSRPPPQLVSTSNRAYMRNP
SSSVPPPSAGSMRTTAAPSPTPRSHSPSASQPGSQLRNRSVSGKRVCSYCNNILGKGAAM
IIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNHQLYCNDCYLRFKSGRPTAM
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcccggggccgactgcgccgtggctttcgccgaggcccagagatgggtggag
gcagtaacagagaagaattttgaaacaaaggattttcgagcttctctagagaatggtgtt
ctgttgtgtgatttggttaataaacttaaacctggtgtcattaagaagatcaatagatta
tccacaccaatagctggtctggataatataaacgtttttttgaaagcttgtgaacagatt
ggattgaaagaagcccagcttttccatcctggggatctacaggatttatcaaaccgagtc
actgtcaggcaagaagagactgataggagagtgaaaaatgttttgataacactgtactgg
ttggggagaaaagcacaaagtaacccgtactataatggaccctatcttaatttgaaagca
tttgagaatcttttaggacaagctctgactaaggctcttgaagactccagctgcctgaaa
aggagtggcagggacagtggttacggtgatatctggtgtgctgaacgtggagaatttcct
acttctccaggcaaccgtaagcgagaagattcgttcgaaagcttggactctttggggtct
aggtcattcacaagctgctcctctgatatcacgttgagaggcggacgtgagggttgtgaa
agtgacacagattctgaatttacatccaaaatgcaggattataataaagatgatatgtcc
tatcgaaggatttcggccattgaaccaaaatctgccttaccattcaaccgttttttgccc
agtaaaagtagacagccctcctatgtgccggcaccgctgaggaagaaaaagccagacaaa
aatgaggataacagaagaagttgggccagcccggtctatccagaagcagatggaacattt
ccaagtaatgagaggagaacttggggcacaaatgtgaagaactggccaacagtacaacaa
acttcaaactcctcttgttacttggaagaggaagaagaaaagacacatatacccaacacc
gtaaaggatgatctttatgtgcgaaagctaagtccaatcacaccaaacccagggaatgct
tttgatcagtttcttcccaaatgttggatcccagaagatgtgaactggaaaagaataaaa
agagaaacttacaaaccatggtataaagaatttcagggattcagtcagtttttattactt
caggcactacaaacatattctgatgacatcttgtcttctgaaacaaatatcagaattgat
cccactgccggcccaaggctcatcacacgtagaaagaatctctcttctgcaccagggtat
aaaagagatgaccttgagatgtcaaccctagatcctgacttagagaatgatgatttcttt
gtcagaaagactggagctttccatgcaaatccatatgttctccgggcttttgaagacttt
agaaggttttctgagcacgaggatcctgtagagagagatataattctgcagtgtagagaa
ggtgaccttgtacttccagatctagaaaaagatgatatgattgttcgccgaattccagca
cagaagaaagaggtgcctctgtcaggggccccagatagataccaaccagtccctttccct
gaaccctggactcttcctccagaaattcaagccaaatttctctgtgtacttgaaaggaca
tgcccatccaaagaaaaaagaaagagctgtagagtattagtgccttcccacaggcagaag
aaagatgacatgttgactcgcaagatccagtcttggcagctggggacgactgtgcctcct
gtcagtttcatgcctggtccctgcagtgaggcggacctccggaagtgggaggccatccgg
gaggccagcagacttaggcacaagaaacggctgttggttgagagactctttcaaaagatt
tatggtgagaatgggagtaagtccatgagtgatgtcagcgcagaggatattcagaacttg
cgtcagctgcgttacgaggaaatgcagaaaataaaatcacagctaaaagaacaagatcag
aaatggcaagatgacctcgcaaaatggaaagatcgtcgaaaaagctacacttcagatctg
cagaagaaaaaagaagagagggaagaaattgaaaagcaggcacttgagaagtccgagaga
agctctaagacatttaaggaaatgctacaggacagggaatcccgaggtcaaatgtccacg
gttacatccaggaggaggttgcattcttctgatgatgtgttgaatgaagagatgctttcc
cctacactgactacgtcagaagcaagttaccagagtgagagagtagaagagaagggaaca
gtgtactctacagaaattcctaaacaagattccacgacttttgcaaaaagagaggatgcg
gtcactgctgaccttcagcttccttctaaaagctccatggaagaacagctcccagactct
ttgtcttctcagcattcactgacgacacaaacagagtcgactcgagtttcagcctctctc
cccagaagttaccagaaaactgatacagccaggttaacatctgtggtcacaccgagacct
tttggctctcaggccaggggaatctcatcactcccaagatcctacacgatggatgatgct
tggaagtataatggaggtgtagaagacgctaggagaacccacagcagtttggtcagcacc
tctgtgcaaaaacttgacataggccagcttgtttccagcaagtccagcgagagagagaga
gcagcgctgggagaaggtgtgatggggctgccgtctcctacatcctccttctcatcactt
tccctggaccaggccgccacgtccaaagccacactgtcttcaacatctggccctgattta
acgtctgagtttggagaagggggaggctcaccgcaagcagaggtctcaagatcacaggat
cagttcagtgatatgagaatcagcataaaccagacgcctgggagcggtcttgactttggg
tttacagtaaaatgggcattttctgggatcttcgttgcatcagtcgaagcaggtagccca
gcagaattttctcagctacaggtagatgatgaaattattgctattaacaacaccaagttt
tcatataaggacacaaaggagtgggaggcaaccatggctaatgctaaagaaaccggaaac
ctagtaatggatatcaggcgctatggaaagtctggttcacccgaaacaaagtggattgat
acaacttctggaatttacaactcagacaaatcttcaagtctgtcaataacaactgatttc
tcagaaagcctccagcattctaatactgaatccaaagaaatgaatggaattcgtgatgaa
agtactacttttgaatcaagagcatctgaacctatttctttgaaaaacttaaaaaggcga
tcacaattttttgaacaagggagttcggattctgtggttcctgatcttccagtcccgact
ctcagtgccccgagccgctgggcgtgggatcaagaggaggcgcggaagcggcaggagagg
tggcagaaggagcaggaccgcctgctgcaggaaaaatatcaacgtgagcaggagaaactc
agggaagagtggcaaagggctaagcaggaagctgagagagagaattacaagtacttgaat
gaggaactgatggtcctgagctccaacagtatttctctgcccacacgggagcctgccatt
gccaccttggaagcctcctggggtgaggggtccaagtcgtcagaccgggaaggaacccgg
gcaggagaggaggagaggagacagcagccgaaggagggtgcggaggaggaccaaagaaag
aagctgcaagagcaactcactcttgagaaagagaggaaactgaaggagcaacggtatcag
gaagagcaggagcagaagcggcgtcaggaggaggcccaggagcagaagcgccaggcagag
agagagagggaaacttcagtcaaaatataccagtatagaaggcctgttgattcctatgac
ataccaaagagagaggaaaaatcttcagggttgcttcctagtgacaggaataaatccaga
tccacaactgagctggatggttaccctacaaataaaaatggaggcaataaatatttagac
caagttgggagcactagctctgcacagaggagctccaagaaggaacaagtcccttcggaa
gcagagttagagagacaacaaattcttcaagagatgaggaagagaacatctcttctcaac
gacaacagctggatccgacagcgcagctccagtgtaactaaagagcccatttgtctgcct
gggattatgagaagaggtgaatctctagataacctggattccccaagatccaattcttgg
aaaccatccccttggctcaatcagccttcaggagtccatgcttcttcctctgttcaagac
ttcagtcgccccccgcctcagctggtgtccacatcaaaccgggcctacatgcggaatcca
tcctccagcgtcccgcctccttcagctggttctatgaggaccaccgctgcaccttctccc
acaccacgcagccattctccttcagcatcacagccgggctcccagctacgcaacaggtca
gtcagtgggaagcgcgtgtgctcctactgtaataacattctgggcaaaggagccgccatg
atcatcgagtccctgggtctttgttatcatttgcattgttttaagtgtgtggcctgtgag
tgtgacctcggaggctcctcctccggagctgaagtcagaatcagaaaccaccaactctac
tgcaatgactgctatctcagattcaaatctggacggccaactgccatgtga
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integrated database retrieval system
