Ailuropoda melanoleuca (giant panda): 100480263
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Entry
100480263 CDS
T01329
Symbol
RORB
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
100480263 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100480263 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aml03310
]
100480263 (RORB)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100480263 (RORB)
Nuclear receptors [BR:
aml03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100480263 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100480263
NCBI-ProteinID:
XP_011229862
Ensembl:
ENSAMEG00000015664
LinkDB
All DBs
Position
17:28972107..29176058
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AA seq
459 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALAR
VYGGSISNGLGSLNSEAGGTYANGHVIDLPKSEGYYNVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKVYQSKSREALWQQCAIQVTHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQXRIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgataagtcctccgggatc
cactacggggtgatcacgtgtgaaggctgcaagggattcttcaggaggagccagcaaaac
aatgcctcttattcctgcccaaggcagagaaactgtttaattgacagaaccaacagaaac
cgttgccaacactgccgactgcagaagtgtcttgccctaggaatgtcgagggatgctgtg
aagttcgggaggatgtccaagaagcagagggacagcctgtatgccgaggtgcagaagcac
cagcagcggctgcaggaacagcggcagcagcagagcggggaggcggaagcgctcgccagg
gtgtacggcggcagcatcagcaacggcctcggcagcctcaacagcgaggccgggggcacg
tacgccaacggacacgtcatcgacctgcccaagtccgagggctattacaacgtggattcc
ggccagccgtcccctgatcagtcaggacttgacatgactggaatcaaacagataaagcaa
gaacctatctatgacctcacgtccgtacccaacttgtttacctatagctctttcaacaac
gggcagctagcgccagggataacgatgacagaaatcgatcgaattgcacagaacatcatt
aagtcccatctggagacctgtcagtacaccatggaggaactacaccagctggcgtggcag
acccacacctatgaagaaattaaagtgtatcaaagcaagtccagggaagcgctgtggcag
caatgtgccatccaggtcacgcatgccatccagtacgtggtggagtttgcaaagcggatc
accggcttcatggagctctgtcaaaatgatcagattctactgctcaagtcaggttgcttg
gaagtggttttagtgagaatgtgccgtgccttcaacccattaaacaacactgttctgttt
gaaggaaaatatggaggaatgcagatgttcaaggccttaggttccgatgacctagtgaat
gaagcatttgactttgcaaagaatttgtgttccttgcagctgactgaggaggaaattgct
ttgttctcatctgctgttctgatatctccagaccgagcctggctgatagaaccaaggaag
gtccagaagcttcaanggagaatttattttgcactgcaacatgtgattcagaagaatcac
ctggacgatgagaccttggcaaagttaatagccaagatccccaccatcacggcggtctgc
aacttgcacggggagaagctgcaggtattcaaacagtcacatccagacatagtgaatacc
ctctttcctccattgtacaaggagctctttaatcctgactgtgccactgtctgcaaatga
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