Ailuropoda melanoleuca (giant panda): 100480296
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Entry
100480296 CDS
T01329
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03440
Homologous recombination
aml03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100480296 (TOP3B)
03460 Fanconi anemia pathway
100480296 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aml03032
]
100480296 (TOP3B)
03400 DNA repair and recombination proteins [BR:
aml03400
]
100480296 (TOP3B)
Enzymes [BR:
aml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
100480296 (TOP3B)
DNA replication proteins [BR:
aml03032
]
Eukaryotic type
DNA Topoisomerases
100480296 (TOP3B)
DNA repair and recombination proteins [BR:
aml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
100480296 (TOP3B)
FA (Fanconi anemia) pathway
100480296 (TOP3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
100480296
NCBI-ProteinID:
XP_002931153
Ensembl:
ENSAMEG00000007454
UniProt:
G1LLS2
LinkDB
All DBs
Position
14:complement(44972714..44996426)
Genome browser
AA seq
862 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSRGSMSSHKGLNGTCSVHEYSGTFAGQPVRFKMTSVCGH
VMTLDFLGKYNKWDKVDPAELFSQAPTEKKEANPKLNMVKFLQVEGKGCDYIVLWLDCDK
EGENICFEVLDAVLPVMNPTHGGEKTVFRARFSSITDTDICAAMARLGEPDHNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVNVDKDRSLLLDWDRVRVFDREIAQMFLNMTKLEKEAQVEATSRKEKAKQRPLA
LNTVEMLRVASSSLGMGPQHAMQTAERLYTQGYISYPRTETTHYPENFDLKGPLRQQANH
PYWADTVKRLLAEGINRPRKGHDAGDHPPITPMRSATEAELGSEAWRLYEYITRHFIATV
SYDCRYLQSTISFRIGPEHFTCTGKTVISPGFTEIMPWQSVPLEESLPTCQRGDTFPVSE
MKMLEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLRPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKADYRQVLGHTLDVFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYTLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCSNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECESGVLVLDPTSGPKWKVACNKCNVVAHCFENAYRVRVSADTCSTCEAALLA
VDFNKAKSPLPGDETQHTGCVFCDPIFQELVELKHAASCHPMHRGGPGRRQGRGRARGRR
PPGKPSARRPKDKMSALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgtgctcatggttgcagagaagccatccttggcccagtccattgctaaaatc
ctctctcgaggaagcatgtcctcacacaaagggctgaacggaacgtgctcagtgcacgag
tacagcgggaccttcgccggccagcccgtccgcttcaagatgacgtctgtctgcggtcac
gtgatgaccttggacttcctgggaaagtacaacaaatgggacaaggtggaccccgcagag
ctgttcagccaagccccgacagagaagaaggaagctaaccccaagctgaacatggtgaag
ttcctgcaggtggagggcaaaggctgtgactacatcgtgctgtggctggactgcgacaag
gagggggagaacatctgctttgaggtgctggacgccgtgctgcctgtcatgaatccgacc
catggtggtgaaaagacagtgttccgggccaggttcagctccatcacggacacggacatc
tgcgccgccatggcccgcctgggcgagcccgaccacaacgaggcgctgtcggtggacgcc
aggcaggagctggacctgcgcatcggctgcgcgttcaccaggtttcaaactaagtacttc
cagggaaaatacggcaatctagacagctccctcatttcgtttgggccatgtcaaacccct
accctgggcttctgcgtggagagacatgataaaatccagtccttcaaaccggagacctac
tgggtgctgcaggccaaggttaatgtggataaagacagatctcttcttttggactgggac
cgagtgcgagtgttcgatcgggaaatcgcacagatgtttttaaacatgacaaagctggag
aaggaagcccaggtggaggccacaagcaggaaagagaaggccaagcagaggcccctcgcc
ctgaacactgtggagatgctgcgagtggctagctcttctctgggcatggggccacagcat
gccatgcagaccgccgagcggctctacacgcaaggctacatcagctatccgcggactgag
accacccactaccccgagaactttgacctgaagggtcctctgcggcagcaggccaaccac
ccctactgggccgacacggtaaagcgcttgttagcagaaggtatcaaccggccacggaaa
ggccacgacgctggtgatcatccccccatcacccccatgaggtctgccacagaggccgaa
ttagggagcgaggcgtggcggctgtatgagtacatcaccagacacttcatcgccacggtt
agctacgactgcaggtacctccagagcaccatttccttccgaatcgggcccgagcacttc
acctgcacagggaaaaccgtcatctctccaggcttcacggagatcatgccctggcagagc
gtgcctctggaggagagcctgcccacctgccagaggggagacacctttcccgtgagcgag
atgaagatgctggagaagcagacgagcccgcccgactacctgacggaggccgagctcatc
acgctcatggagaagcacggcatcgggacagacgccagcatccccgtgcacatcaacaac
atctgtcagcgcaattacgtcactgtggagagtgggcgccggctcagacccaccaacctg
ggcatcgtcctggtgcacggctactacaagatcgatgcagagctggtgctccccaccatt
cgcagcgcggtcgagaagcagctgaatctgattgcccagggcaaggccgactaccgccag
gtcctgggccacacactggacgtctttaagaggaagttccactactttgtggactccatt
gccggcatggacgagctgatggaggtgtctttttcgcccctggcggccacgggcaagccc
ctgtcccgctgtgggaagtgccaccggttcatgaagtacattcaggccaagccgagccgc
ctgcactgctcgcactgtgatgagacctacaccctcccccagaatggcaccatcaagctc
tacaaggagctccggtgcccactggatgacttcgagctggtcctgtggtcatcagggtct
cggggcaagagctacccactgtgcccttattgttccaaccacccgcccttccgagacatg
aagaaaggcatgggctgcaatgagtgcacgcaccccacctgccagcactcactgagcatg
ctgggcatcggccagtgcgtggaatgcgagagtggcgtgctggtgctggaccccacctcg
ggccccaagtggaaggtggcctgcaacaagtgcaatgtggtggcacactgcttcgagaac
gcctaccgtgtgcgcgtgtccgccgacacctgcagcacctgcgaggctgctctgctcgcc
gtggacttcaacaaggccaagtcgccgctcccgggtgacgagacacagcacacgggctgc
gtcttctgcgaccccatcttccaggagctcgtggagctgaagcacgcagcctcctgccac
cccatgcaccgcggcgggccagggaggaggcagggtcgagggcgggcccgaggccggcgg
ccccccgggaagcccagcgccaggcggcccaaggacaagatgtcagccctggctgcctac
tttgtatga
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