KEGG   Ailuropoda melanoleuca (giant panda): 100480300
Entry
100480300         CDS       T01329                                 
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X6
  KO
K16498  protocadherin delta 1
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    100480300 (PCDH9)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:aml01009]
    100480300 (PCDH9)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:aml04515]
    100480300 (PCDH9)
Protein phosphatases and associated proteins [BR:aml01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100480300 (PCDH9)
Cell adhesion molecules [BR:aml04515]
 Cadherins
  Protocadherins
   100480300 (PCDH9)
SSDB
Motif
Pfam: Cadherin Protocadherin Cadherin_CELSR2_9th Cadherin_2 RCR Big_9 V_ATPase_I EphA2_TM MAP17 DUF6249 7tm_3 DUF6377
Other DBs
NCBI-GeneID: 100480300
NCBI-ProteinID: XP_002913095
Ensembl: ENSAMEG00000019019
UniProt: A0A7N5J914
LinkDB
Position
7:complement(101869638..102762406)
AA seq 1237 aa
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPIGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNAPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHSKSD
NIPVTPQKCPSSAGFHIQENEENHYESQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGS
NEGHFNNGSHMTDIPLANLKSYKQAGGTIESPKEHQL
NT seq 3714 nt   +upstreamnt  +downstreamnt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattcc
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtttctaaagctggggatgcccctttggtgaaagtgtccagt
agcactggggaaattttcacaacctccaacagaatagacagagaaaaactctgtgccgga
gcctcttacgctgaggaaaatgagtgtttctttgaacttgaggtagtgatcctccccaat
gactttttcaggctgatcaaaataaaaataattgtcaaggataccaatgataatgccccc
atgtttccatctcctgtcatcaatatttccattccagaaaacactttgatcaacagccgc
tttccaattccatcagcaacagatcctgacacaggcttcaatggtgtacagcattatgaa
ttgctaaatgggcagagtgtttttggactggatatcgtggaaactccggagggagagaag
tggccacaattgattgttcagcaaaacttggacagagaacagaaagatacctatgtgatg
aaaatcaaagtagaggatggaggcactccacagaaatccagcactgccatactacaggtc
acagtaagtgatgtaaatgacaacaggccagtgtttaaagagggtcaagtggaggtgcac
attccagagaatgctcctataggcacctctgtaattcagctccatgccactgatgcagat
ataggcagtaatgctgaaatccggtacatttttggtgcccaggtcgcccctgcaaccaaa
agactctttgctttaaataatactactgggctgattacagttcagaggtccttagatcgc
gaggagacagccattcacaaggtgacagtgctggctagtgatggcagctccacacccgct
cgagcaacggttaccatcaatgtcactgatgtaaatgataacgctcctaacatagacctc
aggtacattataagtcccatcaatggcacagtgtatttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacacagatgtgaacggcaaagtgatc
tgttttattgaaagagaggtcccatttcatttgaaggcagtgtacgacaaccaatatttg
ttagagacctcctctttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctgggaagcccagtttaaatcagactgccctggtaagggttaagcttgag
gacgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcggacattgtttatcagcttgggccgaatgcctccttctttgatctggaccgaaag
acaggagttttgacagcctccagagtctttgacagagaagaacaagaacgattcattttt
acagtaactgccagggacaatgggacccctcccctccaaagccaagcggctgtgatagtt
actgttctggatgagaatgacaacagccccaagtttactcataatcattttcagtttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacagtgacagatgcagat
gctggagagaataaagctgtgactctttccattctaaatgacaatgataattttgtgttg
gatccctattctggagtcataaagtcaaatgtctcatttgatagagagcagcagagttcc
tacacttttgatgtcaaagccaccgatgggggacaaccaccccgctcctctactgcaaaa
gtcactatcaatgtcatggatgtcaatgacaatagcccagttgtcatttctccaccttcc
aacacttcttttaagttggtgcccctctcggccattcctggctctgtggtagcggaagtt
tttgcagtggatatcgacaccgggatgaacgcggaactgaagtatacaattgtgagtgga
aacaacaaaggcttgtttcggatcgatccagtaacaggtaacattactctggaagaaaaa
ccggcacctactgatgtgggcttgcaccgtttggtggtcaacataagtgacctgggatac
ccgaagtctctgcacacgctcgtgcttgtttttctctacgttaacgacactgctgggaat
gcctcctatatctatgacttgattcgcaggactatggagaccccactggacaggaacata
ggggacagtagtcaaccctatcaaaacgaggactatctcaccatcatgatcgccatcgtc
gcgggtgccatggtggtcatcgtcgtgatctttgtcaccgtcctggtgcgctgtcgccat
gcatccaggttcaaagcagctcagaggagcaagcaaggtgctgaatggatgtccccgaac
caggagaacaaacaaaacaagaaaaagaaaaggaagaaaagaaagtctcccaagagctct
cttttgaactttgttacaattgaagagtccaagcccgatgatgcggttcacgaacctatc
aatgggaccataagcctgccggctgagctggaggagcaaagtataggaagatttgactgg
ggcccggcccctccaacaaccttcaagcctaacagccctgatctggccaagcactacaaa
tctgcttctccacagcctgcttttcatcttaaaccagacactccagtttccgtgaaaaag
catcatgtgattcaggaactccctttggacaacacctttgtcgggggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacagcaaaagtgac
aatattcctgtcactcctcagaaatgtcccagctctgcgggtttccacattcaggagaat
gaagaaaaccattacgagtcgcagcgccgcgttacgtttcacctccccgatggctcccag
gaaagctgcagtgacagtggtctaggagaccacgagccggtgggtagtggcaccctgatc
tcacaccctcttcctctggttcagccacaggacgaattctacgaccaggcttctccggac
aagaggaccgaagcagatggcaactctgaccccaactctgatgggcctttgggtccccga
ggattagctgaagctacagagatgtgcactcaggagtgcttggttttgggtcactctgat
aattgctggatgcctcctggcttgggtccatatcaacaccctaaatctcctctctcaacc
tttgcaccccagaaagaatgggtcaagaaggacaagcttgtgaatgggcacacccttacc
agagcctggaaagaagatagcaacaggaaccagttcaatgaccgtaagcagtatggctcc
aatgaaggccatttcaacaatggcagccacatgacagacattcctctggcaaatctgaag
tcttataagcaagcgggaggtactattgagagtccgaaggagcaccaactctaa

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