Ailuropoda melanoleuca (giant panda): 100480367
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Entry
100480367 CDS
T01329
Symbol
USH1C
Name
(RefSeq) harmonin isoform X2
KO
K21877
harmonin
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aml03037
]
100480367 (USH1C)
Cilium and associated proteins [BR:
aml03037
]
Primary cilia and associated proteins
USH complex and associated proteins
100480367 (USH1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USH1C_N
PDZ
PDZ_6
PDZ_2
Baculo_LEF5_C
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
100480367
NCBI-ProteinID:
XP_019661418
Ensembl:
ENSAMEG00000003181
UniProt:
A0A7N5KH97
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Position
16:complement(50491736..50537551)
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AA seq
551 aa
AA seq
DB search
MDRKVAREFRHKVDFLIENDAEKDYLYDVLRMYHQTMDVAVLVGDLKLVINEPSRLPLFD
AIRPLIPLKHQVEYDQLTPRRSRKLKEVRLDRLQPEGLGLSVRGGLEFGCGLFISHLIKG
GQADSVGLQVGDEIVRINGYSISACTHEEVINLIRTKKTVSIKVRHIGLIPVKSSPDEPL
KWQYVDQFVSESGGGRSSLSFPGTQDSKEKKVFISLVGSRGLGCSISSGPVQKPGIFISH
VKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEAVNVLKSSRSLTISIVAGAGRELFLTD
RERLEEARQRELWRQELLMQKRLAMESNKILQEQQEMERQRKKEIAQKAAEENERYRQEM
EQIIEEEEKFKKQWEEDWGSKEQLLSPKTITAEVHPIPLRKPKSDQGVEPELEPADHPDG
GTEEQGEQDFRKYEEGFDPYSMFTPEQIIGKDVRLLRIKKEGSLDLALEGGVDSPVGKVV
VSAVYEGGAAERHGGIVKGDEVMAINGKIVTDYTLAEAEATLQKAWSQGDWIEFVVAVCP
PKQYDDELTFF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggaccggaaggtggctcgagaattccggcacaaggtggattttctgattgaaaatgat
gcagagaaggactatctgtacgacgtgctgcgtatgtatcaccaaaccatggatgtggcc
gtgctagtgggagacctgaagctggtcatcaatgagcctagccgcctgccactgtttgac
gccatcaggccgctgatcccactgaagcaccaggtggagtacgaccagctgacgccccgg
cgctccaggaagctgaaggaggtgcgtctggaccgtctgcagcccgaaggcctcggcctc
agcgttcgtgggggcctcgagttcggctgtgggctcttcatctcccacctcatcaaaggc
ggtcaggcagacagcgtcgggctccaggtgggggatgagatcgtccgcatcaacggatat
tccatctccgcctgtacccacgaggaggtcatcaacctcatccgcaccaagaagactgtg
tccatcaaagtgagacacattggcctgattcctgtgaagagctctcctgacgagcccctc
aaatggcagtatgtggatcagtttgtgtcagaatccgggggtggacggagtagcctgagc
ttccctggcactcaggacagcaaggagaagaaggtcttcatcagcctggtgggatcccgg
ggccttggctgcagcatctccagcgggcctgtccagaagcccggcatctttatcagccat
gtcaagcctggctccctgtctgcagaggtggggttggagacaggggaccagattgtcgaa
gtcaatggcatcgacttctcgaacctggaccacaaggaggccgtgaacgtgctgaagagt
agccgcagcctgaccatctccattgtagctggagccggccgggagctgttcctgacagac
cgggagcggctggaggaggcgcggcagcgcgagctgtggcggcaggagcttctcatgcag
aagcggctggcaatggaatccaacaagatcctccaggagcagcaggagatggagcgacaa
aggaaaaaggaaattgcccagaaggcagcagaggagaacgaaagataccggcaggagatg
gaacagattatagaagaggaggagaagtttaagaagcagtgggaagaagactggggctca
aaggaacagctgctctcacctaaaaccatcaccgccgaagtgcacccaataccccttcgt
aagcctaagtctgatcagggagtggagcccgagcttgagccagcagaccacccggatgga
ggcacggaggagcagggagagcaggatttccggaaatatgaggaaggctttgacccctac
tccatgttcaccccagagcagatcatagggaaggatgtccggctcctgcgcattaagaag
gagggatccttagatctggccctggaaggcggtgtggactccccagtcgggaaggtggtc
gtctcagctgtgtacgaggggggagctgctgagcggcacggtggcattgtgaaaggggat
gaagtcatggcgatcaatggcaagatcgtgacagactacacactggctgaggctgaggcc
accctgcagaaggcctggagtcagggggactggatcgaatttgttgttgccgtctgcccc
ccgaagcagtacgacgatgagctgaccttcttctaa
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