Ailuropoda melanoleuca (giant panda): 100480685
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Entry
100480685 CDS
T01329
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100480685 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100480685 (NHLRC1)
Enzymes [BR:
aml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100480685 (NHLRC1)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100480685 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
Baculo_IE-1
Prok-RING_4
Beta-prop_EML_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
100480685
NCBI-ProteinID:
XP_002922001
Ensembl:
ENSAMEG00000008350
UniProt:
A0A7N5JYC5
LinkDB
All DBs
Position
5:8994559..8996009
Genome browser
AA seq
395 aa
AA seq
DB search
MGAEASGSGPALQELVREAEISLLECKVCFERFGHRQQRRPRNLPCGHVVCLACVAALAH
PRTLALECPFCRRACRGCDTSDCLPVLHLLELLGSALRPAPAAPRSAPCSPGALTCHRAF
GGWGTLVNPTGLALCPKTGRVVVVHDGRRRVRIFDSGGGCAHQFGEKGEAAQDIRYPLDV
TVTNDCHVVVTDAGDRSIKVFDFFGQIKLVIGGQFSLPWGVETTPQNGVVVTDAEAGSLH
LLEVDFPEGVLQRTERLQVHLCCPRGVAVSWLTGAIAVLEHPLGPGSGASSTTVKVFSAS
MQLIGQVDSFGLSLLFPSRITASAVTFDHQGNVIVADTANQAVLCLGKPEEFPVLKPIIT
HGLSHPVALTFTKENALLVLDSAAHSIKVYKADWG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgaggcgtcggggagcgggccggcgctgcaggagctcgtgcgcgaggccgag
atcagcctgctcgagtgcaaggtgtgctttgagaggttcggccaccgccagcagcggcgc
ccgcgcaacctgccctgcggccacgtggtgtgcctggcctgcgtggccgccctggcgcac
ccgcggacgctggccctcgagtgccccttctgccgccgagcctgccggggctgcgacacc
agcgactgcctgccggtgcttcacctcctggagctcctgggctcggcgctccgcccagcc
cccgccgccccccgctccgccccctgcagccccggggccctcacctgccaccgcgctttc
ggaggctgggggaccctggtcaaccccacggggctggcgctgtgtcccaagacggggcgg
gtcgtggtagtgcacgacggcaggaggcgggtcaggatctttgactctgggggaggatgt
gctcatcagttcggagagaagggggaggctgctcaggacattaggtacccactcgatgtc
accgtcaccaacgactgccacgtggttgtcaccgacgccggcgaccgttccatcaaagtg
tttgatttttttggccagatcaagcttgtcattggaggccagttctccttaccttggggc
gtggagaccacccctcagaatggggtcgtggtaactgatgcggaggcagggtcgctgcac
ctgctggaagtcgactttcccgaaggggtcctccagaggaccgaaaggttgcaagttcat
ctgtgctgcccccgaggggtggccgtgtcttggctcaccggggccattgcggtcctggag
caccctctgggtccggggtcgggggccagcagcaccacggtgaaggtgttcagcgccagt
atgcagctgatcggccaagtggatagctttgggctgagcctcctttttccctctagaata
actgcctccgccgtgacctttgatcaccaggggaatgtgattgttgcagataccgctaac
caggctgtcctatgcttaggaaaaccggaggaatttccagtcctgaagcccatcatcacc
cacggtctttcccatcccgtggcactgaccttcaccaaggagaacgctcttcttgtgctg
gacagtgcggcccattccataaaagtctacaaagctgactgggggtaa
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