Ailuropoda melanoleuca (giant panda): 100480688
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Entry
100480688 CDS
T01329
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04612
Antigen processing and presentation
aml05145
Toxoplasmosis
aml05152
Tuberculosis
aml05164
Influenza A
aml05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
100480688 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100480688 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
100480688 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100480688 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
100480688 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
aml01001
]
100480688 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
aml04054
]
100480688 (CIITA)
Enzymes [BR:
aml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
100480688 (CIITA)
Protein kinases [BR:
aml01001
]
Serine/threonine kinases: Other
TAF1 family
100480688 (CIITA)
Pattern recognition receptors [BR:
aml04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100480688 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_14
LRR_8
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
100480688
NCBI-ProteinID:
XP_019658730
Ensembl:
ENSAMEG00000014772
UniProt:
A0A7N5JVE0
LinkDB
All DBs
Position
10:complement(30032452..30077922)
Genome browser
AA seq
1208 aa
AA seq
DB search
MNHFQTILPRVRMLLSSYRPGQVQALLDHMLEKELLSQEYHGALLREPDGEALARKISLT
LLEKGDPDLALLRWAWSGWQAPVAERDPDSKDHSGSGQCAAMELGPLEGGYLELLNSSAD
PLQLYHLYDQTDLAREEIELCSEADVDTINCDQFSRLLCDMEGDEETREAYANIAELDQY
VFQDSQLDGLGKDIFIEHIGLEEMISESVEVEEAGQKSQKRPFPEELPVDLKHRKLAEAL
AVPAVTGTFLVGSASDSSALPCLSPPAVFNKEPASSQSWLEEPVLMPVPPSSSLLSCLSL
SAGRIQIVPSLPSLPQGLWQISGPGTGVSGMVIYQGEMPQASQVLPSSGPAMQSLPKSPE
RPGSTSPFAPSAADLPGMPEPALTSRANMTEDQMSPTQCLTAHEVSSKPPKWPETVEQFC
SSLRDKYQAEPADPEGILVEVELVRARLERNSGKSQERELATPDWAERQLVRGGLAEVLL
AAGDRRRPRETQVIAVLGKAGQGKSHWAREVSRAWACGQLPQYDFVFYLPCHCLDRAKDT
YRLQDLLFCLGPQPQPVDEEVFGHILRRPDRVLLILDAFEGLEGQDGLLHSAGGPVSTEP
HSLRGLLAGLFQRKLLRGCTLLLTARPRGRLAHSLSKADILFEVTGFSAEQAETYVTRYL
ERAGATEHREQALALLRGQPFLLSHSHSPTVCRAVCQLSEALLELGGEAELPSTLTGLYV
GLLGPAARDSPPGALAGLARLAWELGRRHRGTLQDSQFPSAEVRAWAVARGLVQPVPGAP
DAELAFSSFLLQCFLGAMWLALSTEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLL
FQPHADCLGALAGPALAALGARKQKVLSRYLKRLQPGTLRAGRLLELLHCAHEASDAGLW
QHVVQGLPARLSFLGTRLTPPNTYVLCSALAAAGRDFSLDLRSTGIDPSGLGSLVGLGCV
THFRASLSDTVGLWESLQQRGETKLLRAVEEKFTIEPFKAKSPKDVDDLGNLVQIQRTRS
SSEDAAEELPAVRDLKKLEFALGSVLGPQAFPKLVRILEAFSSLQHLDLDSLSENKIGDK
GVEQLSATFPRLKALETLNLSQNSITDVGACKLAEALPSLAASLLRLSLYNNSICDVGAE
SLAHVLPDMVSLRVLDVQYNKFTAAGAQQLAASLRKCPHVETLAMWTPTIPFGVHEHLQQ
LDSRISLR
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccagaccatcctgcctagggtccggatgctgctgtccagctatcggccg
ggtcaggtgcaggccctcctggaccacatgctggagaaggagctcctgtcccaggagtac
cacggcgccctgctccgcgagcctgacggcgaggccctggccaggaagatctccttgacc
ctgctggaaaaaggagacccagacttggccctcttgaggtgggcatggagtgggtggcag
gccccggtggccgagagggaccccgactccaaggaccacagtggcagtggacagtgtgcc
gccatggagttggggcctctagaaggcgggtacctggagcttctcaacagcagtgccgat
cccttgcagctctaccacctctatgaccagacagacctggctagagaagagattgagctc
tgctcagaagccgacgtggacaccatcaactgcgaccagttcagcagactgttgtgtgac
atggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactggaccagtat
gtgttccaggactcccaactggacggtctgggcaaagacattttcattgagcacatagga
ttggaagaaatgatcagtgagagtgtggaggtggaggaagcagggcagaaaagtcagaaa
agacccttcccagaggaactgcccgtggacttgaagcacaggaagctagctgaggccctc
gctgtgcctgcagtgactggcacgttcctggtcgggtcagcgagtgactcctcagccctg
ccctgcctgtcaccacctgctgtgttcaacaaggagccagcatccagccagagctggctg
gaggagcccgtcctgatgcctgtgcccccttccagttccttgctgagctgcctgagtctt
tctgctggacgcatccagatcgtccccagcctcccctccctgccccaggggctctggcaa
atctcagggcctgggacaggggtgtctggtatggtcatctatcaaggcgagatgccccag
gccagccaagtgcttccttccagtggtcccgccatgcagagcctccccaaatccccagag
cggcccggctccaccagcccctttgccccgtctgcagctgaccttcctggcatgccagag
ccggccttgacctcccgtgcaaatatgaccgaggaccagatgtcccctacgcaatgcctg
acagctcacgaggtctccagcaagcctccgaaatggcctgagaccgtggagcagttctgc
agctccctacgggacaagtaccaggctgagcccgcagacccggaaggcatcctcgtggag
gtggagctggtgagggcgcggctggagaggaacagcggcaagagccaggagagggagctg
gccaccccggactgggcagagcggcagctggtccgcggggggctggccgaggtgctgctg
gctgcaggggaccgccggcggccgcgggagacacaggtgatcgccgtgctgggcaaagca
ggacagggcaagagccactgggcccgggaagtgagccgagcctgggcctgcggccagctg
ccccagtatgacttcgtcttctacttgccctgccactgtttggaccgcgcgaaggacact
taccgcctgcaggatctgctcttctgcctgggcccccagccacagcccgtggacgaggag
gtcttcggccacatcttgaggaggcccgaccgggttctgctcatcctggatgccttcgag
gggctcgagggccaagatggcctcctgcacagcgcaggtggacccgtgtccaccgagccc
cactccctccgggggctgctggccggtctcttccagcgaaagctgctgcgaggctgcacc
ctgctgctcacggcccggccccggggccgcctggcccacagcctgagcaaggccgacatc
ctgttcgaggtgaccggcttctcagccgagcaggctgagacctatgtgacgcgctacttg
gagcgcgctggggcaaccgagcaccgggagcaagccctggcactcctccgcggccagcca
ttcctgctcagccacagccacagccccaccgtgtgccgggccgtgtgccagctctccgag
gccctcctggagctgggcggcgaggccgagctgccctccacgctcacgggactctacgtg
ggcctgctgggccctgcggcccgcgacagccccccgggggccctggcaggactggccagg
ctggcatgggagctgggccgcagacaccggggcaccctgcaggacagccagttcccgtcg
gcagaggtgagggcctgggccgtggccagaggcctggtgcagcccgtcccgggggccccg
gacgcggagctggccttctccagcttcctcctgcagtgcttcctgggggccatgtggctg
gcgctgagcacggaaatcaaggacaaggagctgccacagtacttggcattgaccccgagg
aagaagaggccctacgacaactggctggagggcgtgccgcgcttcctggctgggctgttg
ttccagccccacgccgactgcctcggagccctggccgggccggcgctggctgccttgggg
gccaggaagcagaaggtcctcagcaggtaccttaagcggctgcagccggggacactacgg
gccggccggctgctggagctgctgcactgtgcccacgaggcttcggacgccgggctctgg
cagcacgtggtgcaggggctcccggcccgcctctccttcctgggcacccggctcacaccc
cccaacacctacgtgctgtgcagcgccttggcggcggcaggccgagacttctccctggac
ctccgcagcacgggcattgacccctctgggctggggagccttgtgggactcggctgtgtc
acccatttcagggcttcgctgagtgacacggtggggctctgggagtctctacagcagcgt
ggggagaccaagctgctccgggcagtggaggagaagttcaccatcgagcctttcaaggcc
aaatccccgaaggatgtggatgacctgggcaacctcgtgcagatccagaggacgaggagt
tcctcggaagacgcagctgaagaactccctgctgtccgggacctgaagaagcttgagttt
gcgctgggctccgtcttgggcccccaggcttttcccaaactggtgagaatcctcgaggcc
ttttcctcccttcagcatctggacctggattcactgagcgagaacaagatcggggacaag
ggtgtcgagcagctgtcagccaccttccctcggctgaaggccctggagactctcaacttg
tcccagaacagcatcaccgacgtgggcgcctgcaagctcgccgaggccttgccctccctg
gctgcgtccctcctcaggctgagcctctacaataacagcatctgtgacgtgggagcggag
agcctggcacacgtgcttccagacatggtgtctctccgggtgttggatgtccagtataac
aagttcacggccgctggggcccagcagctcgccgccagcctgaggaagtgccctcatgtg
gagacactggcgatgtggacgcccaccatcccgtttggcgtccatgaacatctgcagcag
ctggactcacggatcagcctgagatga
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integrated database retrieval system
