Ailuropoda melanoleuca (giant panda): 100480709
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Entry
100480709 CDS
T01329
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X2
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100480709 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aml01007
]
100480709 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aml03016
]
100480709 (KARS1)
Enzymes [BR:
aml01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
100480709 (KARS1)
Amino acid related enzymes [BR:
aml01007
]
Aminoacyl-tRNA synthetase
Class II (A)
100480709 (KARS1)
Transfer RNA biogenesis [BR:
aml03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
100480709 (KARS1)
Prokaryotic type
Other AARSs
100480709 (KARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
100480709
NCBI-ProteinID:
XP_002927769
Ensembl:
ENSAMEG00000005347
UniProt:
G1LFN2
LinkDB
All DBs
Position
12:complement(69881662..69897093)
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AA seq
597 aa
AA seq
DB search
MAAVQGAEVKVDGGEPKLSKNELKRRLKAEKKIAEKEAKQKELSEKQLSQATAAATNHTT
DNGVGAEEESLDPNQYFKIRSQAVHQLKINGEDPYPHKFHVDVSLTHFIQEYSHLQPGDH
LTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGD
IIGVQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFV
RQKFIIRSKIITYIRTFLDELGFLEIETPMMNVIPGGAVAKPFITYHNELDMNLYMRVAP
ELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKMISG
MVQHITGSYKVTYHPDGPEGEAFEIDFTPPFRRISMVEELEKVLGVKLPETKLFETEETR
KILDDLCVARAVECPPPRTTARLLDKLVGEFLETTCINPTFICDHPQIMSPLAKWHRSKE
GLTERFELFIMKKEICNAYTELNDPVRQRELFEEQAKAKAAGDDEAMFIDENYCTALEYG
LPPTAGWGMGIDRITMFLTDSNNIKEVLLFPAMKPEDKKESGAATDTLESTTAGTSV
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtgcagggggctgaggtgaaagtggacggtggcgagccaaaactgagcaaa
aatgagctaaagagacgcctgaaagccgagaagaaaattgcagagaaggaggccaagcag
aaggagctcagtgaaaaacagctaagccaggccactgctgctgccaccaaccacaccact
gacaatggtgtgggtgctgaggaggagagtttggacccaaatcaatacttcaagatccgc
agccaagcagtccaccaactgaagatcaacggggaagacccgtacccacacaagttccac
gttgacgtctcgctcactcatttcatccaagaatacagtcacctgcagcctggggaccac
ctgactgacatcaccttaaaggtggcaggtaggatacatgccaaaagagcttctggggga
aagctcatcttctatgaccttagaggagagggggtcaagttgcaagtcatggccaattcc
aggaattataaatcagaggaagaatttattcacatcaataacaaactgcgtcggggagac
ataatcggagttcaggggaatcctgggaaaaccaagaagggtgagctgagcatcattccc
tatgagattacactgctgtctccctgcttgcatatgttacctcatctccactttggcctc
aaagacaaggaaacacggtatcgtcagagatacttggacttgatcctgaatgacttcgtg
aggcagaaatttatcatccgctctaagatcatcacatatataaggactttcttggatgag
ttgggattcctagagattgaaactcccatgatgaatgtcatcccagggggagctgtggcc
aagcctttcatcacctaccacaatgagctggacatgaatttatacatgagagttgctcca
gaactctaccataagatactggtggttggtggcattgaccgggtttatgaaattggacgc
cagttccggaatgaaggaattgatttgactcacaatcctgagttcaccacctgtgagttc
tacatggcctatgcagactatcacgatctcatggaaatcacagagaagatgatttcaggg
atggtgcagcacattacaggcagttataaagtcacctaccatccagatggcccagagggt
gaagcctttgagattgacttcaccccccccttccggagaatcagcatggtagaagagctt
gaaaaggtcttgggggtgaaactaccagaaaccaagctctttgaaactgaagaaactcgg
aaaattctcgatgacctctgtgtggcaagagctgttgaatgccccccacctcggaccaca
gccaggctccttgataagcttgtcggggagttcctggaaacaacgtgcatcaatcctaca
ttcatctgtgatcacccgcagataatgagccctttggctaaatggcaccgctctaaagag
ggtctgactgagcgctttgagttgttcatcatgaagaaggaaatatgcaacgcctacacc
gaactcaacgaccccgtgcgacagcgggagctgttcgaagaacaggccaaggccaaggct
gctggcgacgatgaggccatgttcatagatgagaactactgcactgccctggaatacggg
ctgccccctacggctggctggggtatgggcatcgaccgcatcaccatgtttctcacagat
tccaataacatcaaggaagtacttctgtttcctgccatgaaacccgaagacaagaaagag
agtggagctgccactgatacattagaaagcacaacagctggcacttctgtctag
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