Ailuropoda melanoleuca (giant panda): 100480722
Help
Entry
100480722 CDS
T01329
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X3
KO
K15623
protein SSXT
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03082
ATP-dependent chromatin remodeling
aml05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100480722 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100480722 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100480722 (SS18)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100480722 (SS18)
GBAF(ncBAF) complex
100480722 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
100480722
NCBI-ProteinID:
XP_002912707
Ensembl:
ENSAMEG00000014156
UniProt:
A0A7N5JW36
LinkDB
All DBs
Position
14:complement(62524225..62609504)
Genome browser
AA seq
387 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPIQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPIGSYGPRPNMNMQPNQGPMMHQQPPSQQYSMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGNSQYGQ
QQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYR
PTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcgttcgcagctcccaggcagcgaggcaagggggagatcactcccgctgcg
attcagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcagcagatgttgcatacgaatttggtctac
cttgccacgatagcagattctaatcaaaatatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtcctggagggatgaatcagagcggccctcccccacctccacgc
tctcacaacatgccttcagatggaatggtaggtgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgcctattcagggacctggaccc
aatcaactcaatatgacaaacagttccatgaacatgccttcaagtagccatggatccatg
ggaggttacaaccattctgtgccatcatcacagagcatgccagtacagaatcagatgacg
atgagtcaagggcaaccaataggaagctatggccccagaccaaatatgaatatgcaacca
aaccaaggtccaatgatgcatcagcagcctccttcccaacaatacagtatgccacaggga
ggtgggcagcattatcaaggccagcagccccctatgggaatgatgggtcaagttaaccaa
ggcaatcatatgatgggtcagagacagattcctccttatagacctcctcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggaaattcacagtatggccaa
cagcaagatgcctaccagggaccgcctccccagcagggatacccaccccaacagcagcag
tacccggggcagcagggctatccaggacagcagcagggctatggtccttcacagggtggt
ccaggtcctcagtatcctaactacccgcaagggcaaggtcagcaatatgggggttataga
ccaacacagcctggaccaccacagccgccacagcagaggccttatggatatgaccaggga
cagtatggaaattaccagcagtga
DBGET
integrated database retrieval system