KEGG   Ailuropoda melanoleuca (giant panda): 100480722
Entry
100480722         CDS       T01329                                 
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X3
  KO
K15623  protein SSXT
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03082  ATP-dependent chromatin remodeling
aml05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100480722 (SS18)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    100480722 (SS18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aml03036]
    100480722 (SS18)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    100480722 (SS18)
   GBAF(ncBAF) complex
    100480722 (SS18)
SSDB
Motif
Pfam: SSXT
Other DBs
NCBI-GeneID: 100480722
NCBI-ProteinID: XP_002912707
Ensembl: ENSAMEG00000014156
UniProt: A0A7N5JW36
LinkDB
Position
14:complement(62524225..62609504)
AA seq 387 aa
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPIQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPIGSYGPRPNMNMQPNQGPMMHQQPPSQQYSMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGNSQYGQ
QQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYR
PTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq 1164 nt   +upstreamnt  +downstreamnt
atgtctgtggcgttcgcagctcccaggcagcgaggcaagggggagatcactcccgctgcg
attcagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcagcagatgttgcatacgaatttggtctac
cttgccacgatagcagattctaatcaaaatatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtcctggagggatgaatcagagcggccctcccccacctccacgc
tctcacaacatgccttcagatggaatggtaggtgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgcctattcagggacctggaccc
aatcaactcaatatgacaaacagttccatgaacatgccttcaagtagccatggatccatg
ggaggttacaaccattctgtgccatcatcacagagcatgccagtacagaatcagatgacg
atgagtcaagggcaaccaataggaagctatggccccagaccaaatatgaatatgcaacca
aaccaaggtccaatgatgcatcagcagcctccttcccaacaatacagtatgccacaggga
ggtgggcagcattatcaaggccagcagccccctatgggaatgatgggtcaagttaaccaa
ggcaatcatatgatgggtcagagacagattcctccttatagacctcctcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggaaattcacagtatggccaa
cagcaagatgcctaccagggaccgcctccccagcagggatacccaccccaacagcagcag
tacccggggcagcagggctatccaggacagcagcagggctatggtccttcacagggtggt
ccaggtcctcagtatcctaactacccgcaagggcaaggtcagcaatatgggggttataga
ccaacacagcctggaccaccacagccgccacagcagaggccttatggatatgaccaggga
cagtatggaaattaccagcagtga

DBGET integrated database retrieval system