Ailuropoda melanoleuca (giant panda): 100480738
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Entry
100480738 CDS
T01329
Symbol
FANCL
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03460
Fanconi anemia pathway
aml04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100480738 (FANCL)
09124 Replication and repair
03460 Fanconi anemia pathway
100480738 (FANCL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100480738 (FANCL)
03400 DNA repair and recombination proteins [BR:
aml03400
]
100480738 (FANCL)
Enzymes [BR:
aml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100480738 (FANCL)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100480738 (FANCL)
DNA repair and recombination proteins [BR:
aml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
100480738 (FANCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
zf-HC5HC2H
zf-RING-like
zf-rbx1
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
100480738
NCBI-ProteinID:
XP_011219847
Ensembl:
ENSAMEG00000015826
LinkDB
All DBs
Position
4:complement(82422954..82514682)
Genome browser
AA seq
375 aa
AA seq
DB search
MAEMEASLLRQCPLLLPQNRAKTVYEGFISVQGCDFHLRVVLPEDLQMKNARLLCSWQLR
AILNGYHQIVQQRMQHSPDLMSFMMELKMILEVALKNRQECYALPPPPQFYSSLIEEIGT
LGWDKLVYVDTCLSTIKLKAEDASGRKHLITLKLKAKYPAESPDCFVDFPVSFSVSWTPQ
SSLISIYGQFLAALESLKAFWDVMDEIDEKTWVLEPEKPTRSATARRIALGNNASVNIEV
DPRHPTMLPECCFLGADHVVKPLGIKLSRNIHLWDPENSLLQNLKDVLEIDFPARANLEK
SDFSMDCGICYAYQLDGAIPDQVCDNSQCGQPFHQICLYEWLRGLLTSRQSFNIIFGECP
YCSKPITLKMSGRKS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcggagatggaagcgagcctgttgcgccagtgcccgctgcttctgcctcagaaccgg
gcgaaaaccgtgtacgaaggattcatttcggttcagggatgtgattttcaccttagagta
gtgttgcctgaagatttacaaatgaagaatgcaagattattatgtagttggcaactgaga
gcaatacttaatggataccatcaaatagtacaacagagaatgcagcactctcctgatcta
atgagctttatgatggagttgaagatgattttggaagttgctttaaagaatagacaagag
tgttatgcactgcctcctcccccccagttctactccagccttattgaagagataggaact
cttggttgggataaacttgtatatgtggatacttgtctcagtaccatcaagttaaaagct
gaagatgcttctggtagaaagcatctaattactctcaagttgaaggcaaagtaccctgca
gaatcaccagattgttttgtggattttcctgtttcattttctgtttcctggacaccacag
agctccttaataagcatttacggtcagtttttggcagccttagaatcactgaaggcattc
tgggatgttatggatgaaatcgatgagaagacttgggtacttgagccagaaaaacctacc
cggagtgcgacggcacgcagaattgcactaggaaataatgcttcagtaaatatagaggtt
gaccccaggcatcctactatgcttcctgagtgctgctttcttggagcagaccatgtggta
aaacctctgggaattaagctgagcagaaacatacatttatgggatccagaaaatagtctg
ttacaaaacttgaaagatgttttagaaatagattttccagctcgcgctaacctggaaaaa
tctgatttttctatggattgtgggatttgttatgcctatcagcttgatggcgccattcct
gatcaagtgtgtgataattcccagtgtggacagcctttccatcaaatatgcttatatgag
tggttgagaggactactgactagtagacagagttttaacatcatatttggtgaatgccca
tattgtagcaagccaattaccttgaaaatgtctggaaggaaatcctga
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integrated database retrieval system
