Ailuropoda melanoleuca (giant panda): 100480868
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Entry
100480868 CDS
T01329
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X5
KO
K09291
nucleoprotein TPR
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03013
Nucleocytoplasmic transport
aml05014
Amyotrophic lateral sclerosis
aml05200
Pathways in cancer
aml05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100480868 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100480868 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
100480868 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100480868 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100480868 (TPR)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100480868 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
DUF5082
DUF1192
Motif
Other DBs
NCBI-GeneID:
100480868
NCBI-ProteinID:
XP_002924887
Ensembl:
ENSAMEG00000015423
UniProt:
G1MAI0
LinkDB
All DBs
Position
8:83615834..83688721
Genome browser
AA seq
2439 aa
AA seq
DB search
MPSSGSVSRSRQRGRPMASRSFDGSRRGSLRRAGAREPRSEVAEAAAQASGSSWSSPFFS
VWAPPAAGPAASGPIDMAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHE
KFKVESEQQYFEIEKRLSHSQERLVNETRECQSLRLDLEKLNNQLKALTEKNKELEVAQD
RSVAIQSQFTRTKEELEAEKRDLVRTNERLSQELEYLTEDFKRQNEKLKESNATKGDLQL
KLDELQASDVSVKYREKRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKC
NLENKKEEVSRMEEQMNGLKTSNENLQKHVEELLTKLKEAKEQQASMEEKFHNELNAHIK
LSNLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKAIQDHLLEVEESKDQMEKEMLE
KIGELEKELQNANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVE
TQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKE
IQRLQEDTDKANKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSA
DISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKIAELQLKLE
NALTELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGVAIPLQASSLDDISLASTPKR
SSTSQTASTPAPVPVIESAEAIEAKAALKQLQEIFENYKKEKADNEKIQNEQLEKLQDQI
TDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMT
QDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQG
ILERSETETKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTET
NLHLNTKELLKNAQKEIATLKQHLSNMEVQLASQSSQRTGKGQPTNKEDVDDLLSQLRQA
EEQANDLKERLKTSTSNVEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQL
EKKLMEVEKEKQELQDDKRKAIESMEQQLSELKKTLNSVQNEVQEALQRASTALSNEQQA
RRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQKAESQL
LECKASWEERERMLKDEVSKCMSRCEDLEKQNRLLHDQIEKLSDKVVASVKEGVQGPLNV
SLNEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNA
EREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDI
LPLQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVH
TKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEKETIQKDLDAKIIDI
QEKVKTITQVKKIGRRYKTQYEELKAQQDKVMETSAQSSGDHQEQHVSVQEMQELKETLN
QAETKAKSLESQIENLQKTLSEKEAEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQ
QITEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKS
QYEGRISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASTSDP
PTANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVE
SQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQPSIPQPILTVQQQTQATAFVQPTQQSHP
QIEPANQELSPNIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASD
QVSDDTVEMPLPKKLKSVTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYT
PMEDSEETSQSLQIDLGPLQSDQQTTTSSQDGQGKGDDVIVIDSDDEEEDDDENDGEHED
YEEDEEDDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGG
GESNQRAADSQNSGEGNTGTAESSFSQDISREQQPSSASERQTPRAPQSPRRPPHPLPPR
LTIHAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPH
RTDGFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEE
ESGGRSVPTTPLQVAAPVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETATGDDGD
EVFVEAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFR
RVRLQTTLRQGVRGRQFNRQRGVSHAMGGRGGINRGNIN
NT seq
7320 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggctcagtgtctagaagccgccaaagaggacgacccatggcatcccgg
agctttgacgggtcccgccgcgggagtctccggcgggcgggcgcacgcgagcctcggagc
gaggtggccgaggcggccgcccaggcttctgggtcctcttggtcttcgcctttcttctcg
gtgtgggctccgccggctgctggccctgcggcctccggcccgattgacatggcggcggtg
ttgcagcaagtcctggagcgcacggagctgaacaagctgcctaagtccgtccagaacaaa
cttgaaaagttccttgctgaccagcaatccgagatcgatggcctgaaggggcggcatgag
aaatttaaggtggagagtgaacaacagtattttgagatagagaagaggctgtcccacagt
caggagagacttgtgaatgaaacccgagagtgccaaagtttgaggcttgacctagagaag
ctcaacaatcaactgaaggcgctaactgagaaaaataaagaacttgaagttgctcaggat
cgcagtgttgccattcagagccagtttacaaggacgaaagaagaattagaagctgagaaa
agagacttagttagaaccaatgagagactatctcaagaacttgaatatttaacagaggat
tttaaacgtcaaaatgaaaaacttaaagaaagcaatgccacaaagggtgatctgcagtta
aaactggatgaacttcaagcttctgatgtttctgttaaatatcgagaaaaacgcttggag
caagaaaaggagttgttacataatcagaatacatggctgaacacagagttaaaaactaaa
accgatgaacttctggctcttggcagagaaaaaggaaatgagattctagagcttaaatgt
aatcttgaaaacaaaaaagaggaggtttctagaatggaagaacagatgaatggcttgaaa
acatcaaatgagaatcttcaaaagcatgtagaagagctattgaccaaactgaaagaggcc
aaggaacagcaggccagtatggaagagaaattccacaatgaattaaatgctcatataaag
ctctctaatctatacaagagtgctgccgatgactcagaagcaaagagcaatgaactgacc
cgagcagtggatgaactacacaaacttttgaaagaagctggagaagccaataaagcaata
caggatcatcttttagaagtggaggaatctaaagatcaaatggaaaaagaaatgcttgag
aaaataggggaattggagaaggaattacagaacgcaaatgacctgctttctgccacaaaa
cgtaaaggagctatattatctgaagaagagcttgcagctatgtctcctactgcagcagct
gtagctaagatagtgaagcccggcatgaaattaaccgagctgtataatgcttatgtggaa
actcaggatcagttgcttttggagaaactagagaataaaagaattaataagtatctagat
gaaatagtgaaagaagttgaagccaaagcaccaattttgaaacgccagcgtgaggagtat
gaacgtgcacagaaagctgtggcaagtttatctgttaagcttgaacaagctatgaaggag
attcagcgattgcaggaggacactgataaagctaacaaacattcatctgtgcttgaaaga
gacaatcaaaggatggaaatacaaataaaagatctttcacaacagattagagtgcttttg
atggaacttgaagaagcaaggggtaatcatgtaattcgtgatgaagaagtaagctctgct
gatataagtagttcatctgaagtaatatcacagcatctagtatcttatagaaatattgaa
gaacttcaacagcaaaatcagcgtctcttagtggcccttagggaacttggggaaacgaga
gaaagagaagaacaagaaacaacttcatctaaaattgctgagcttcagctaaaacttgag
aatgccctcactgaattagaacaactccgtgagtcacgacaacatcaaatgcagcttgtt
gattccatagttcgtcagcgtgacatgtaccgtattttgttgtcacaaacaacaggagtt
gccattcctttacaagcttcaagcttagatgatatttctcttgcatcaactccaaaacgt
tcaagtacgtcccagactgcttccactcctgctccagtacctgtaattgagtcagcagag
gccatagaagccaaggctgcccttaaacagttgcaggaaatttttgagaattacaaaaaa
gaaaaggcagataatgaaaaaatacaaaatgagcaacttgagaaacttcaggatcaaatt
acagatttacgatcacaaaacaccaaaatttctacacagctggactttgcttctaaacgt
tacgaaatgctacaagataacgttgaaggatatcgtcgagaaatcacatccctacatgag
agaaatcagaaactcactgcaacaactcaaaagcaggaacagatcatcaatacaatgacg
caggatttgagaggagcaaatgaaaagctagctgttgcggaagtaagagcagaaaacttg
aaaaaggaaaaggaaatgcttaaattgtcagaagtccgtctttctcagcaaagggagtct
ttattagctgaacaaagagggcaaaacttgctgctcactaatctgcaaacaattcaggga
atattagagcgatctgaaacagaaaccaaacaaaggcttagtagccagatagaaaaactg
gaacatgagatatctcatctaaagaagaagctggaaaatgaggtggaacaaaggcatacg
ctcactagaaatctagatgttcaacttttagatacaaagagacagctggatactgagaca
aatcttcatcttaacacaaaagaactattaaaaaatgctcaaaaggaaattgctacattg
aaacagcacctcagtaatatggaagtccagcttgcctctcagtcctcacagagaactggt
aaaggtcagcccaccaacaaagaagatgtggatgatcttctaagtcagctaaggcaggca
gaggagcaggcgaatgatttaaaggagagactcaaaacaagtactagtaatgtggaacag
tatcgagcaatggttactagtttagaagaatctcttaacaaggaaaaacaggtgacagaa
gaagtacgtaagaatattgaagttcgtttaaaagagtcagcggaatttcagacacagttg
gaaaagaaattgatggaagttgagaaggaaaaacaggaacttcaggatgacaagagaaaa
gccatagagagcatggaacaacagttatctgagttaaagaaaacactcaacagcgttcag
aacgaagtacaagaagctcttcagagagcaagcacagctttgagtaatgagcagcaagcc
agacgtgactgtcaggaacaggctaaaatagctgtggaagctcagaataagtatgagaga
gaactgatgctacatgctgctgatgttgaagctctacaagctgccaaggaacaggtttcc
aaaatggcatcagtccgtcagcatttggaagaaacaacccagaaagcagaatcacagtta
ctggagtgtaaagcatcttgggaggaaagagagagaatgttaaaggatgaagtttccaag
tgtatgtctcgctgtgaagatttggagaaacaaaacagattacttcatgatcagattgaa
aaattaagtgacaaggttgtcgcctctgtgaaggaaggtgtacaaggtcccttgaatgta
tctcttaatgaagaaggaaaatctcaagaacaaattctagaaattctcagatttatacga
cgagaaaaagaaatcgctgaaaccaggtttgaggtggctcaggttgagagtctgcgttat
cgacaaagagttgagcttttagaaagagaactgcaggaactgcaggatagtctgaatgct
gaaagagagaaagtccaggtaactgcaaaaacaatggctcagcatgaagaactgatgaag
aaaactgaaacaatgaatgtagtgatggagaccaataagatgctaagagaagagaaagag
aggctggaacaggatctacagcagatgcaagcaaaggtaaggaaactggagttagatatt
ttacccttacaagaagcaaatgctgagctaagtgaaaaaagcggtatgttgcaagcagag
aagaagttactagaagaagatgtcaaacgttggaaagcacggaaccagcatctagtaagt
caacagaaagatccagatacagaagaatatcggaagctcctttctgaaaaggaagttcat
actaagcgtattcaacagttgactgaagaaattgggagacttaaagctgagattgcaaga
tcaaatgcatctttgaccaacaatcagaacttaatccagagcctgaaggaagacttaaat
aaagtaagaactgaaaaggaaaccattcaaaaggacttagatgccaaaataattgatatc
caagaaaaggtcaaaactattactcaagtcaagaagattgggcgtaggtacaagactcaa
tatgaagaacttaaagcacaacaggataaggtcatggagacctcggctcagtcttctgga
gaccaccaggaacagcatgtctcagttcaggaaatgcaggagcttaaagaaaccctcaat
caagctgaaacaaaggcaaaatcactagagagtcaaatagaaaatctgcagaagacatta
tccgaaaaagaggcagaagcaagaaatctgcaggagcaaactgtgcagcttcagtctgag
ctttcacgacttcgtcaggatcttcaagatagaaccacacaagaggagcagctccgacag
cagataactgaaaaggaagaaaaaacaagaaaggccatagtagcagcaaagtcaaagatt
gcacatttagctggtgtaaaagatcagctaactaaagaaaatgaggagcttaaacaaagg
aatggagccttagatcagcagaaagatgaattggatgttcgaatgactgctcttaaatcc
cagtatgaaggtcgaattagtcgcttggaaagagaactccgagagcatcaagagagacac
ctggagcagagagatgagcctcaagaacctactaataaggtcccagaacagcagagacag
atcacattgaaaacaactccagcttctggtgaaagaggaattgccagcacatcagaccca
ccaacagccaatatcaaaccaactcctgttgtgtctactccaagtaaagtgacagctgca
gctatggctgggaataagtcaacacccagagctagtatccgcccaatggtcacacctgca
actgttacaaatcctactactaccccaacagcgacagtgatgcccactacacaagtagag
tcacaggaagctatgcagtcagaagggcctgtggaacatgttccagtttttggaagcaca
agtggttctgtccgctctactagtcctaacgtccagccttctatccctcaacccatttta
actgttcagcaacaaacacaggctacagcttttgtgcagcccacccaacagagtcatcct
cagattgagcctgcaaatcaagagctgtcccccaacatagtagaagttgtacagagttca
ccagttgaacggccttctacttccacagcagtatttggcactgtgtcagctaccccaagt
tcttctttgcctaaacggacacgtgaagaggaagaggatagcaccatagaagcatcagac
caagtctctgatgatacagtggaaatgcctcttccaaagaagttgaaaagtgttacccct
gtaggaactgaggaagaagttatggcagaagaaagtactgatggagaggtagaaactcaa
gtatacaaccaagattctcaagattccataggagaaggagttacccagggagattatact
ccaatggaagacagtgaagaaacctctcagtctctacaaatagaccttggaccccttcag
tcagatcagcaaacaacaacttcgtcccaagatggtcagggcaaaggagatgatgtcatt
gtgattgacagtgatgatgaagaagaggatgatgatgaaaatgatggagaacatgaggat
tatgaggaagatgaggaagatgatgacgatgatgaagatgacacagggatgggagacgag
ggtgaggacagtaacgaaggcactggtagtgcagatggcaatgatggctatgaagctgat
gatgccgagggtggtgatgggactgatccaggtacagaaacagaagaaagtatgggtgga
ggtgaaagtaatcagagagctgctgattctcaaaacagtggtgaaggtaatacaggtact
gcagagtcctctttttcccaggacatttctagagaacagcagccatcatcagcatctgaa
agacagactcctagagcacctcagtctccaagacgccctccacaccctcttcccccacga
ctgaccattcatgctccacctcaagaattgggaccaccagtacagagaattcagatgact
cggaggcagtctgtaggacggggacttcagttgactccaggaatcggtggcatgcagcag
catttttttgatgatgaagacagaacagttccaagtactccaactcttgtggtgccacat
cgtactgatggatttgctgaagcaattcattccccacaggttgctggtgttcctagattc
cggtttgggccacctgaagatatgccacaaacaagttcaagtcactctgatcttggccag
cttgcttctcaaggaggtttaggaatgtatgaaacacccctcttcctagctcatgaagaa
gagtcaggtggccgaagtgttcccactacccctctacaggtagcagccccagtgactgtg
tttactgagagtaccacctctgatgcttcggagcatgcctctcagtctgttccaatggtg
acaacatccactggcactttatccacaacaaatgaaacagcaacaggtgatgatggagat
gaagtatttgtggaggcagaatctgaaggtattagttcagaagcaggcctagaaattgat
agccagcaggaagaagaacctgttcaggcatctgatgagtcggatcttccttctacaagc
caggatcctccatccagctcttctgtagatactagcagtagtcaaccaaagcctttcaga
cgagtcagacttcagacaacattgagacaaggtgtccgtggtcgtcagtttaacagacag
agaggtgtgagccatgcaatgggagggagaggaggaataaatagaggaaatattaattaa
DBGET
integrated database retrieval system