Ailuropoda melanoleuca (giant panda): 100480886
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Entry
100480886 CDS
T01329
Symbol
HEATR1
Name
(RefSeq) HEAT repeat-containing protein 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100480886 (HEATR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aml03009
]
100480886 (HEATR1)
Ribosome biogenesis [BR:
aml03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100480886 (HEATR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
HEAT_EZ
Vac14_Fab1_bd
Telomere_reg-2
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
100480886
NCBI-ProteinID:
XP_019664850
Ensembl:
ENSAMEG00000001015
UniProt:
D2I0E9
LinkDB
All DBs
Position
6:56348432..56403410
Genome browser
AA seq
2140 aa
AA seq
DB search
MTSLAQQLQRLALPQSDRSLLSRDEVASLLFDPKEAATVDRDTAFAIGCTGLEELLGIDP
SFEQFEAPLFSQLAKTLERSVQTKAVNKQLDENISLFLIHLSPYFLLKPAQKCLEWLIHR
FHIHLYNQDSLIACVLPYHETRIFVRVIQLLKINNPKHKWFWLSPVKQHGVPLARGTLIT
HCCKDLGFMDFICSLVTKSVKVFAEYPGSSAQLRVLLTFYASTIVSALVTAEDKLDNIVA
KLFPYIQKGLKSSLPDYRAATYMIICQISVKVTMEDTFVNSLASQIIKTLTKIPSLIKDG
LGCLIVLMQRQKPESLGKKPFPHLCNVPGLITILHGISEIYDISPLLRYMLPHLVVSIVN
HVTGEETEGMDGQIYRRHLEAILTNISLKDNLDHLLASLLFEEYISYSSQEEINPDKVSL
LNEQFLPLVRLLESKYPRTLDVVLEERLKEITDINKQELFHQFISLSTSGGKYQFLADSD
TSLMLSLNHPLAAVRLLAINHLKNMKTSEESVDESFIKEAVLTRLGDDSVDVVLSAINAF
KIFKQHFSSEVIVSNLLSLFRRAELSKNREWYKVLEVAADILVKEKILSENDQLSNQVVG
HLLPFMIIVSDDVESADTKIAVYLSKSGICSLHPVLRGWKEALENVIKSRESGKLIGVAN
QKMTALLADNISSGDPSSMLKMVEDLISIGEKECFSLKQKVTFHVIMAVLVSCCSSLKET
HFTFAIRVFSLLQKKIKKLESVITAVEIPSEWHFELMMDRELPVELWAHYIEQLNMAQRV
AMEDSVLLIFSLKNFIHALKAPQSFPKDDTWWNPEKLKEDSRAYLRLLIGLFEMILSGAD
AIHFRVLMKLFIKVHLEDVFQLFKFFSVLWTYGCSLSNPLKCSIKTALQTQALYIGREML
SAQKAQNKHQLAFVSSPVVISLLINLGSPIKEVRRASILCLQALSGVVSHFHLVINHLVP
KTEEITSDVTYVAQDLATLFEELQREKKLKSHQKLSETLKNLLNCVYSCPSYIAKDLVKV
LEEVNSEMVLSQLLPMAEQLLEKIQKEPTAVLKDEAIILHLILGKYNECSASLLHKDPKS
LDIFIKAVHTTKELCTGMPTVQITALEKITKPFFAAVSDEKVQQKLLCMLFDLLVNCKNS
HCAQTVSSVFKGISVNAEQVRIELEPPDKTKSLGTIQQTRRQKMQQKKSQDLESVQEVGG
SYWQRVTLILELLQHKKKLKNPQILIPTLFNLLSRSLEHLPPEQGNMEYTKQLILSCLLN
ICQKLSPDGGRIPKAVLDEEKFNVELIVQCIRVSEMPQTHHHALLLLGTIAGIFPDKVLH
NIMSIFTFMGANVMRLDDTYSFQVINKTVKMIIPALIQSDAGDSVEVTRNVEGVVVKVIH
VFVDALPHVPEHRRLPILAQLVDTLGAERFLWVLLLLLFEQYVTKTVLVAACGEKDAILE
ADTEFWISVCSEFSVQHQIQSLMNILQYLIKLPEEKEEAVSKAVSTKSESQEEMLQIFNI
DTHTSKQLRHFKFLSVSFMSQLLASSHFIRKVVESGGPQILKGLEQRLLETVLGYINAVA
QSMEKNTDTLTVKFWRALLSKAYDMLDKVNALLPTETFVAVVRGLLDNPLPSVRRKALDL
LNNKLQQNTSWKKKIVYRFIKLVPVLLAIVQHKKKTVEEQAINRQTALYTLKLLCKNFGA
ENPEHFVPVLNTAVRLIALETKEDKNVLGSALLCVAEVASTLEALAIPQLPRLMPSLLTT
MKNTSELVSGEVYLLSALAALQKVVETLPHFISPYLEGVLSQVVHLEKITSEMGSASQAN
VRVTSLKKTLATTLSPRVLLPAINRTYKQIEDWKNHMGPFMSILQEHIGVMKKEELTSHQ
SQLTVFFLEALDFRAQHSENDLEEIGKTENCIIDCLVAMVVKLSEVTFRPLFFKLFDWAK
TEDAPKDRLLTFYNLADCIAEKLKGLFTLFAGHLVKPFADTLNQVNISKTDEAFFDSDKD
PEKCCLLLQFILNCLYKIFLFDTQHFISKERAEALMMPLVDQLENRLGGDARFQERVTKH
LIPCLAQFSVAMADDSLWKPLNYQILLKTRDSSPKVRFAALIAVLALAEKLKENYIVLLP
ESIPFLAELMEDECEEVEHQCQKTIQQLEAILGEPLQSYF
NT seq
6423 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccttagcccagcagctccagcgcctcgccctcccgcagagtgaccgcagtctg
ctctcgagagatgaagtcgcttctttgttgtttgaccccaaggaagcggccaccgtcgac
agggacaccgcctttgccatcggatgcactggcctggaggagctgctggggattgaccct
tcctttgagcagtttgaagcaccgttgttcagccagctagcaaaaacattggagcgcagc
gttcagaccaaagcggtgaacaaacagctggatgaaaacatttcattattccttattcac
ttgtctccttacttcctactgaagccagcacagaagtgtctggagtggttgattcacagg
ttccatatccatctttataatcaagatagcctcattgcttgtgttctgccgtaccatgag
acaagaatatttgtacgggttatacagctcctaaaaattaataatccaaagcacaaatgg
ttttggttgtcaccagttaagcaacatggagtgcccttagctaggggaactttgattacc
cactgctgcaaagatcttggattcatggatttcatttgtagtctggtgacaaaatctgtg
aaggtttttgcggagtatcctgggagttcagctcagttgagggtgcttttaacattttat
gcttctaccatcgtgtctgctctagtgactgctgaggacaaattggataatatagttgcc
aagctgtttccatacatccaaaagggattgaaatcatctttaccagattacagagctgca
acgtatatgataatatgtcagatttctgtgaaagtgacaatggaagataccttcgttaat
tcgttggcttcacagatcatcaaaacgctgaccaaaattccctctttgatcaaggatgga
ttaggttgcttgatagtgctcatgcagagacagaagccagagagccttgggaaaaagcca
tttcctcacttgtgtaatgttcctggtcttattacaatacttcatgggatttctgaaata
tatgacatcagtcctcttctgcgttacatgcttccccatctggttgtctccatcgttaat
catgttacaggagaagaaactgaagggatggatggtcaaatatacaggagacatttagaa
gctatacttacaaatatatcactgaaggacaacttagaccatttgttggctagccttctt
tttgaagagtatatttcatatagttcacaggaagaaatcaatcctgataaagtgtctttg
cttaacgaacagtttcttccacttgtcagacttctagaaagcaaatatcccagaacatta
gatgttgtactggaggaacgtcttaaagaaattacagatataaataaacaagaacttttt
catcagtttatctctctttctacaagtggaggaaagtatcagtttttagcagattctgat
acctccttgatgctcagtctgaatcatccacttgctgctgtgagacttctggccattaat
catctgaaaaatatgaaaacatcagaggagagtgtcgatgagtctttcataaaagaagct
gttttaacccgattaggtgatgatagcgtggatgttgttttgtcagctataaatgctttt
aagattttcaaacaacactttagttcggaagtgatagtttcaaatctcctcagtctcttt
cgaagagcagaactttcaaaaaatagggaatggtacaaggtacttgaggtagcagcagac
atactagttaaggaaaagatactgagtgaaaatgatcagttgtcaaatcaggtggtgggg
catctgctgccatttatgattattgtcagcgatgatgtggaatccgccgacacgaaaatc
gctgtgtatttatcgaaatcaggaatttgctctctgcaccctgtattaagaggctggaaa
gaagctcttgaaaatgtgattaaaagcagagagtcaggaaaactgattggtgtagcaaat
cagaagatgactgcattattggctgacaatataagttcaggggatccttcctcaatgtta
aagatggtggaggatttaataagcattggggaaaaggagtgctttagcctgaagcagaaa
gtgacttttcatgtgatcatggctgtgcttgtttcttgctgttcatctttaaaagaaact
cactttacatttgcgataagagtcttcagtttgttgcagaaaaaaataaagaagcttgaa
agtgtcattactgcagtggaaatcccctcagaatggcattttgagttgatgatggacaga
gagcttccagtggaactgtgggcacattacatagagcagctcaacatggcccagcgtgtt
gctatggaggactccgttttactcatattttcactgaaaaatttcattcatgcactaaag
gctcctcagtcttttcctaaagatgatacgtggtggaatcctgaaaaactgaaagaagac
agcagagcctatctgcgcttgcttattgggctgtttgagatgatactcagtggtgctgat
gccattcattttagggttctgatgaaacttttcataaaggtgcatctagaagatgttttt
cagttattcaagttcttttccgttttatggacatacgggtgtagcctttcaaatccactt
aaatgcagcataaaaacagcactgcagactcaagctctttatataggtcgtgagatgctc
tctgctcagaaggctcagaataaacatcagctggcgtttgtgtcttctccagtggtgata
tctctactcattaatctgggaagccccataaaagaagtacgaagggcctccattctttgt
ctccaggccctcagtggagtggtgtcccatttccatctggtaataaatcatttggttcct
aaaacagaagagatcacctcggatgtcacctatgttgctcaggatttagctactttattt
gaggaactacagagagaaaagaaactgaaatctcatcagaagttatctgaaactttgaaa
aacctactgaattgtgtatatagttgcccatcttacattgcaaaagatttggtgaaagta
cttgaggaagtcaacagtgagatggtgctttctcagctattgcctatggctgaacaactg
ttagaaaagatccagaaggagccgacagctgtcctaaaagatgaggccattattttacat
ctcatcctgggaaaatacaatgaatgttcagcttcccttttacataaggacccaaagagt
ctagatatatttataaaagccgtgcatacaacaaaggaactttgcacaggaatgccaacc
gttcagataacagctcttgaaaagattacaaagccattttttgcagctgtatcagacgaa
aaagttcagcagaagcttttgtgcatgttgtttgatttattggtgaattgtaaaaattca
cattgtgcccagaccgttagcagtgtttttaaagggatttccgttaatgctgaacaagtc
agaatagaactggagccaccagacaaaacgaagtccttgggcacaattcagcaaacaaga
agacagaaaatgcagcagaaaaaatcacaagatctagaatctgttcaggaagttggaggt
tcttactggcaaagagtaaccctcatcctagaattactgcagcacaaaaagaaactcaaa
aatcctcagatactgataccgactctttttaacctgctgtcaaggagtttagaacatctg
ccaccggagcagggaaatatggaatacaccaaacaattaattcttagttgtttgctcaac
atctgccagaaactctctccagatggtggcagaataccaaaggctgttctagatgaggag
aagttcaatgtggagttgatcgttcagtgcatccgtgtttcagagatgccgcagacccat
caccatgcccttttacttttgggtactattgctggaatatttcctgataaagttctacac
aatatcatgtctatttttacatttatgggagccaatgtcatgcgtctagatgatacttac
agttttcaggttattaacaagacagtgaagatgattatcccagcacttattcagtccgat
gctggagactctgtcgaagtcacgagaaacgtggaaggagttgtggtgaaagtcattcat
gtgtttgtggacgcgctgccgcacgttccagagcacaggcgcctccccatccttgctcag
cttgtcgatacgttaggtgcagaaagattcctctgggttctcctcctcctgctttttgaa
cagtatgtcactaaaacagtgctggtggctgcctgtggagaaaaggatgctattttagag
gcagacactgagttttggatttcagtgtgttctgaattcagtgtccaacatcagatacaa
agcttgatgaatattcttcagtacttaataaagctgccagaggaaaaagaagaagctgtc
tccaaagcagtatcaactaaaagcgaatcacaagaagaaatgctacagatttttaatata
gacactcacactagcaagcagctgcggcattttaaattcttgtcagtgtccttcatgtct
caactcctggcttctagccattttatcagaaaggtggttgaaagtggcggtcctcagatt
ttaaaaggccttgaacagaggttgctggaaacggttcttggctatattaatgctgtagcg
cagtccatggagaagaatacagacacactaactgtgaagttctggcgggcactactgagc
aaagcttacgacatgttagataaggtcaatgccttgctgcccacagagacatttgttgct
gtggtcagggggctactagataacccgctgccatctgtccgccggaaagcattggatctt
ttgaacaataagctacagcagaatacctcctggaaaaagaaaattgtttatcgtttcatc
aaactggttccagtccttttggccatcgtgcagcataaaaaaaagacagtagaagaacaa
gcaataaacagacaaacagcgttgtataccctgaaacttttatgcaagaattttggtgca
gaaaatccagagcattttgtcccagtgctgaatactgcagtgagactgattgcactggaa
acgaaagaagacaagaatgtcttgggaagtgctctgctgtgtgtggctgaggtggcctcc
accctggaagcactggccatcccccagcttccccgcctaatgccatcattactgacaacg
atgaaaaacaccagcgagctggtctccggcgaggtctatctgctcagtgctttggcggcc
ctgcagaaggttgtggagaccctcccacacttcatcagcccttacctggaaggggtcttg
tcacaggtggttcatttggagaaaatcactagtgaaatgggttctgcctcacaagctaat
gtccgcgtcacatcccttaagaagacactggctaccactctctcaccccgagtcttactg
cccgcaatcaacagaacgtacaagcaaattgaggactggaagaaccacatgggtccgttc
atgagcatcctgcaagagcacattggggtcatgaagaaggaagagctcacctcccatcag
tctcagctaactgtatttttcttggaagccctggacttccgagcacagcactctgaaaat
gatctggaggaaattggaaaaacagaaaattgtatcattgactgtctagtagccatggtt
gtaaaactttctgaagtcacattcaggccccttttcttcaagctgtttgattgggctaaa
acagaggatgcgccaaaggacagactgttgacattttacaacttggcggattgcattgct
gaaaagctgaaagggctttttactctgtttgctggccacttggtgaagccttttgcggac
accttgaaccaggtgaacatctccaaaacagatgaagcgttttttgactctgacaaggac
cctgaaaagtgctgcttgctcttacagtttattttgaactgtttatataaaatcttcctt
tttgatactcagcactttatcagtaaagagagagcagaagctttgatgatgcccctggtg
gaccagctggaaaacaggctgggaggggatgcacgcttccaggagcgggtgacaaagcac
ctgatcccctgcctcgcgcagttctcagtggccatggcagacgactctctgtggaaaccg
ctgaactaccagattctgctcaagacgagagactcctcacccaaggttcgatttgctgct
ctgattgctgtgttagcactggccgaaaaactaaaggagaattatattgttttgctacca
gagtccattcctttcttagctgagttgatggaagatgaatgtgaagaagtagaacaccag
tgccagaagaccattcagcagctggaagctatactgggagagccgctccagagctacttc
tga
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