Ailuropoda melanoleuca (giant panda): 100481057
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Entry
100481057 CDS
T01329
Symbol
PKD2
Name
(RefSeq) polycystin-2
KO
K04986
polycystin 2
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aml03037
]
100481057 (PKD2)
04040 Ion channels [BR:
aml04040
]
100481057 (PKD2)
Cilium and associated proteins [BR:
aml03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100481057 (PKD2)
Ion channels [BR:
aml04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100481057 (PKD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
CNNM
SU10_portal
Motif
Other DBs
NCBI-GeneID:
100481057
NCBI-ProteinID:
XP_034527438
Ensembl:
ENSAMEG00000003126
LinkDB
All DBs
Position
11:complement(40277640..40329815)
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AA seq
915 aa
AA seq
DB search
MERIRQAAARDPPAGASASPSPPLSSCSRQAWSRDNPGFEAEEEEEEEEVEGEEGGMVVE
MDVEWRPGSRRSAASSAVSSVGARGRGLGGYHGSGHPSGRRRRREDQGPPSSSPAGGGDP
LHRHLPLDGQPPRVAWAERLVRGLRGLWGTRLMEESNTNREKYLKSVLRELATYLLFLIV
LCILTYGMMSSSVYYYTRIMSQLFLDTPVSKTEKTNFKTLSSMEDFWKFTEGALLDGLYW
KTQPSNRSEADNRSFIYYENLLLGVPRIRQLKVRNGSCSIPQDLRDEIKECYDVYSASSE
DRAPFGPRNGTAWIYTSEKDLNGSSHWGMIATYSGAGYYLDLSRTREETAAQVASLKKNG
WLDRGTRATFIDFSVYNANINLFCVIRLLVEFPATGGVIPSWQFQPVKLIRSVTTFDFFL
AACEIIFCFFILYYVVEEILEIRIHKLHYFRSFWNCLDVVIIVLSVVAVGINIYRTSNVE
VLLQFLEDQNTFPNFEHLAYWQIQFNNIAAVIVFFVWIKLFKFINFNRTMSQLSTTMSRC
AKDLFGFAIMFFIIFLAYAQLAYLVFGTQVDDFSTFQECIFTQFRIILGDINFAEIEEAN
RVLGPIYFTTFVFFMFFILLNMFLAIINDTYSEVKSDLAQQKAEMELSDLIRKGYQKALV
KLKLKKNTVDDISESLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEH
EHQQMRDDLEKEREDLDLDHSSLPRPMSSRSFPRSLDDSEEDDDEDSGHSSRRRGSISSG
VSYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEIMERAKLKRREVLGRLLDGVVEDER
LGRDSEIHREQMERLVREELERWESDDAASQISHGLGTPVGLNGQPRSRSSRPSSSQSTE
GIEGAGANGSSNIHV
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtatccggcaagcggccgcgcgggaccccccggccggagcctcagcctctcct
tctcctccgctctcgtcgtgctcgcggcaggcatggagccgtgacaacccaggtttcgag
gccgaggaggaggaggaggaagaggaggtggaaggagaggaaggaggaatggtggtggag
atggacgtggagtggcgcccgggcagccggaggtcggccgcctcctccgccgtgagctcc
gtgggcgcccggggccgggggctggggggttaccacggctctggccacccgagcgggagg
cggcgccggcgagaggaccagggccccccgagttccagcccggccggcggcggggacccg
ctgcatcgccacctccccctggacgggcagccgccccgagtggcctgggccgagaggctg
gttcgtgggctgcgaggtctctggggaacaagactcatggaagaaagcaacactaaccga
gagaagtatcttaaaagtgttttacgggagctggccacatacctcctttttctcatagtc
ttgtgcattttgacctatgggatgatgagctccagtgtgtactactacacccggatcatg
tcacaactcttcctagacaccccagtgtccaaaacagagaaaacaaactttaaaactctt
tcttcaatggaagacttctggaagttcacagaaggtgccttgttggatgggctgtattgg
aagacacagcccagcaacagaagcgaagctgacaaccgaagcttcatctactacgagaac
ctcctgttaggggtgccccgtatccggcaactcaaagttagaaatggatcctgttctatt
ccccaggacttgagagatgagattaaagagtgctatgacgtctactccgccagtagtgaa
gacagggctcctttcggtccaagaaacggaactgcttggatctacacaagtgaaaaagac
ttgaacggtagtagccactggggaatgattgcaacctatagcggagctggctattacctg
gatttgtcacgaacaagagaggagacggctgctcaggttgctagcctcaagaaaaatggc
tggctggaccgaggaaccagggcaacgtttattgacttttcagtgtacaacgccaacatt
aacctgttctgtgtgatcaggttattggttgaattcccagcaacaggcggtgtgatccca
tcttggcagtttcagcctgtaaagctgatccgctctgtcacaacttttgatttcttcctg
gcagcctgtgagattatcttttgtttttttatcctttactatgtggtggaagagatattg
gaaattcgcattcacaagctacactatttcaggagtttctggaattgtctggatgttgtg
atcattgtgctatcagtggtagctgtaggaattaacatatacagaacatcaaatgtggag
gtgctcctacagtttctggaagatcaaaatactttccccaacttcgagcatctggcatac
tggcaaatacagttcaacaatatagctgctgtcatcgtattttttgtctggattaagctc
ttcaaattcatcaactttaacaggaccatgagtcagctctccacaaccatgtctcggtgt
gccaaagacctctttggctttgcgattatgttcttcattattttcttagcatatgctcaa
ctggcctaccttgtctttggcactcaggttgacgacttcagtactttccaagagtgtatt
ttcactcaattccgtatcattttgggtgatatcaacttcgcagagattgaggaagctaat
cgagttttgggaccaatttatttcactacatttgtgttctttatgttcttcattcttttg
aatatgtttttggccatcatcaatgatacttactctgaagttaaatctgatttggcccag
cagaaagctgaaatggagctctcagatcttatcagaaagggctaccagaaagccttggtc
aaactaaaactgaaaaaaaatactgtggatgacatttctgagagtctgaggcaaggggga
ggcaagttaaactttgatgaacttcgacaagatctcaaagggaagggccatactgatgca
gagatcgaggcaatattcacaaaatatgaccaagatggagatcaagaactgaccgaacat
gaacatcagcagatgagagacgacctggaaaaagagagggaggacctggatctggatcac
agctctttaccacgtccgatgagtagccgaagtttccctcgaagcttggatgactctgag
gaggatgatgatgaagacagtgggcatagctccagaaggaggggaagcatctccagtggg
gtttcttatgaagagtttcaagtcctggtgagacgcgtggaccgcatggagcactccatc
ggcagcatcgtgtccaagattgacgctgtgatcgtgaagctggagatcatggagcgggcc
aaactgaagagaagggaggtgttgggaaggctgctggatggggtggtggaggatgagaga
ctgggtcgtgacagtgaaatccacagggagcagatggaacggctggtacgggaagagctg
gaacgctgggaatctgatgatgcggcttcccaaataagtcacggtttaggcacacccgtg
ggactgaatggtcagcctcgctccagaagctcccgcccttcttcctcccagtctacagaa
ggaatagaaggtgcaggtgcaaacgggagttccaatatccacgtctag
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