KEGG   Ailuropoda melanoleuca (giant panda): 100481057
Entry
100481057         CDS       T01329                                 
Symbol
PKD2
Name
(RefSeq) polycystin-2
  KO
K04986  polycystin 2
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:aml03037]
    100481057 (PKD2)
   04040 Ion channels [BR:aml04040]
    100481057 (PKD2)
Cilium and associated proteins [BR:aml03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   100481057 (PKD2)
Ion channels [BR:aml04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   100481057 (PKD2)
SSDB
Motif
Pfam: PKD_channel Polycystin_dom Ion_trans Fer4_24 EF-hand_1 EF-hand_7 CNNM SU10_portal
Other DBs
NCBI-GeneID: 100481057
NCBI-ProteinID: XP_034527438
Ensembl: ENSAMEG00000003126
LinkDB
Position
11:complement(40277640..40329815)
AA seq 915 aa
MERIRQAAARDPPAGASASPSPPLSSCSRQAWSRDNPGFEAEEEEEEEEVEGEEGGMVVE
MDVEWRPGSRRSAASSAVSSVGARGRGLGGYHGSGHPSGRRRRREDQGPPSSSPAGGGDP
LHRHLPLDGQPPRVAWAERLVRGLRGLWGTRLMEESNTNREKYLKSVLRELATYLLFLIV
LCILTYGMMSSSVYYYTRIMSQLFLDTPVSKTEKTNFKTLSSMEDFWKFTEGALLDGLYW
KTQPSNRSEADNRSFIYYENLLLGVPRIRQLKVRNGSCSIPQDLRDEIKECYDVYSASSE
DRAPFGPRNGTAWIYTSEKDLNGSSHWGMIATYSGAGYYLDLSRTREETAAQVASLKKNG
WLDRGTRATFIDFSVYNANINLFCVIRLLVEFPATGGVIPSWQFQPVKLIRSVTTFDFFL
AACEIIFCFFILYYVVEEILEIRIHKLHYFRSFWNCLDVVIIVLSVVAVGINIYRTSNVE
VLLQFLEDQNTFPNFEHLAYWQIQFNNIAAVIVFFVWIKLFKFINFNRTMSQLSTTMSRC
AKDLFGFAIMFFIIFLAYAQLAYLVFGTQVDDFSTFQECIFTQFRIILGDINFAEIEEAN
RVLGPIYFTTFVFFMFFILLNMFLAIINDTYSEVKSDLAQQKAEMELSDLIRKGYQKALV
KLKLKKNTVDDISESLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEH
EHQQMRDDLEKEREDLDLDHSSLPRPMSSRSFPRSLDDSEEDDDEDSGHSSRRRGSISSG
VSYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEIMERAKLKRREVLGRLLDGVVEDER
LGRDSEIHREQMERLVREELERWESDDAASQISHGLGTPVGLNGQPRSRSSRPSSSQSTE
GIEGAGANGSSNIHV
NT seq 2748 nt   +upstreamnt  +downstreamnt
atggagcgtatccggcaagcggccgcgcgggaccccccggccggagcctcagcctctcct
tctcctccgctctcgtcgtgctcgcggcaggcatggagccgtgacaacccaggtttcgag
gccgaggaggaggaggaggaagaggaggtggaaggagaggaaggaggaatggtggtggag
atggacgtggagtggcgcccgggcagccggaggtcggccgcctcctccgccgtgagctcc
gtgggcgcccggggccgggggctggggggttaccacggctctggccacccgagcgggagg
cggcgccggcgagaggaccagggccccccgagttccagcccggccggcggcggggacccg
ctgcatcgccacctccccctggacgggcagccgccccgagtggcctgggccgagaggctg
gttcgtgggctgcgaggtctctggggaacaagactcatggaagaaagcaacactaaccga
gagaagtatcttaaaagtgttttacgggagctggccacatacctcctttttctcatagtc
ttgtgcattttgacctatgggatgatgagctccagtgtgtactactacacccggatcatg
tcacaactcttcctagacaccccagtgtccaaaacagagaaaacaaactttaaaactctt
tcttcaatggaagacttctggaagttcacagaaggtgccttgttggatgggctgtattgg
aagacacagcccagcaacagaagcgaagctgacaaccgaagcttcatctactacgagaac
ctcctgttaggggtgccccgtatccggcaactcaaagttagaaatggatcctgttctatt
ccccaggacttgagagatgagattaaagagtgctatgacgtctactccgccagtagtgaa
gacagggctcctttcggtccaagaaacggaactgcttggatctacacaagtgaaaaagac
ttgaacggtagtagccactggggaatgattgcaacctatagcggagctggctattacctg
gatttgtcacgaacaagagaggagacggctgctcaggttgctagcctcaagaaaaatggc
tggctggaccgaggaaccagggcaacgtttattgacttttcagtgtacaacgccaacatt
aacctgttctgtgtgatcaggttattggttgaattcccagcaacaggcggtgtgatccca
tcttggcagtttcagcctgtaaagctgatccgctctgtcacaacttttgatttcttcctg
gcagcctgtgagattatcttttgtttttttatcctttactatgtggtggaagagatattg
gaaattcgcattcacaagctacactatttcaggagtttctggaattgtctggatgttgtg
atcattgtgctatcagtggtagctgtaggaattaacatatacagaacatcaaatgtggag
gtgctcctacagtttctggaagatcaaaatactttccccaacttcgagcatctggcatac
tggcaaatacagttcaacaatatagctgctgtcatcgtattttttgtctggattaagctc
ttcaaattcatcaactttaacaggaccatgagtcagctctccacaaccatgtctcggtgt
gccaaagacctctttggctttgcgattatgttcttcattattttcttagcatatgctcaa
ctggcctaccttgtctttggcactcaggttgacgacttcagtactttccaagagtgtatt
ttcactcaattccgtatcattttgggtgatatcaacttcgcagagattgaggaagctaat
cgagttttgggaccaatttatttcactacatttgtgttctttatgttcttcattcttttg
aatatgtttttggccatcatcaatgatacttactctgaagttaaatctgatttggcccag
cagaaagctgaaatggagctctcagatcttatcagaaagggctaccagaaagccttggtc
aaactaaaactgaaaaaaaatactgtggatgacatttctgagagtctgaggcaaggggga
ggcaagttaaactttgatgaacttcgacaagatctcaaagggaagggccatactgatgca
gagatcgaggcaatattcacaaaatatgaccaagatggagatcaagaactgaccgaacat
gaacatcagcagatgagagacgacctggaaaaagagagggaggacctggatctggatcac
agctctttaccacgtccgatgagtagccgaagtttccctcgaagcttggatgactctgag
gaggatgatgatgaagacagtgggcatagctccagaaggaggggaagcatctccagtggg
gtttcttatgaagagtttcaagtcctggtgagacgcgtggaccgcatggagcactccatc
ggcagcatcgtgtccaagattgacgctgtgatcgtgaagctggagatcatggagcgggcc
aaactgaagagaagggaggtgttgggaaggctgctggatggggtggtggaggatgagaga
ctgggtcgtgacagtgaaatccacagggagcagatggaacggctggtacgggaagagctg
gaacgctgggaatctgatgatgcggcttcccaaataagtcacggtttaggcacacccgtg
ggactgaatggtcagcctcgctccagaagctcccgcccttcttcctcccagtctacagaa
ggaatagaaggtgcaggtgcaaacgggagttccaatatccacgtctag

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