Ailuropoda melanoleuca (giant panda): 100481064
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Entry
100481064 CDS
T01329
Symbol
SOX10
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-10
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100481064 (SOX10)
Transcription factors [BR:
aml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100481064 (SOX10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100481064
NCBI-ProteinID:
XP_034500270
Ensembl:
ENSAMEG00000010350
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All DBs
Position
15:complement(81143115..81151801)
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AA seq
466 aa
AA seq
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MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD
GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR
KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN
GKAAQGESECPGGEAEQGGAAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQSHGPPT
PPTTPKTELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETFDVAELDQY
LPPNGHPGHVGSYSAAGYGLGSALAVASGHSAWISKPPGVALPTVSPPGVDAKAQVKTET
AGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHSGQASG
LYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagcaggacctgtccgaggtggagctgagccccgtgggctccgaggagccc
cgctgcctgtccccggggagcgcgccctcgctggggcccgacggcggcggcggcggatcg
ggcctgcgagccagcccggggcccggcgagctgggcaaggtcaagaaggagcagcaggac
ggcgaagcggacgatgacaagttccccgtttgcatccgcgaggccgtcagccaggtgctg
agcggctacgactggacgctggtgcccatgcccgtgcgcgtcaacggcgccagcaagagc
aaaccgcacgtcaagcggcccatgaacgccttcatggtgtgggcgcaggcggcgcgcagg
aagctggcagaccagtacccgcacctacacaacgcggagctcagcaagacgctgggcaag
ctctggaggctgctgaacgagagcgacaagcgccccttcattgaggaggctgagcggctc
cggatgcagcacaagaaggaccacccagactacaagtaccagccccggaggcggaagaat
gggaaggcggcccagggggagtcagagtgtcccgggggcgaggctgagcagggcggggct
gcggccatccaggcccactacaagagcgcccacctggaccaccggcacccgggagagggc
tcccccatgtccgacgggaaccctgagcacccctcaggccagagccatggcccacctacc
cctccgaccaccccaaagacagagctgcagtcgggcaaggcagaccccaagcgggatggg
cgctccatgggggagggcgggaagcctcacatcgacttcggcaacgtggacatcggtgag
atcagccatgaggtaatgtccaacatggagacctttgatgtggctgagttggaccagtac
ctgccacccaacgggcacccgggccacgtgggcagctactcggcagctggctacgggctg
ggcagcgccctggctgtggccagtggacactccgcctggatctccaagccaccaggcgtg
gctctgcccacggtctcaccacccggtgtggatgccaaagcccaggtgaagacggagacc
gcggggccccagggccccccacactacaccgaccagccatccacctcgcagatcgcctac
acctccctcagcctgccccactatggatccgcttttccctccatctcccgcccccagttt
gactactctgaccatcagccctcaggaccctattatggccattcgggccaggcctctggc
ctctattcggccttctcctacatggggccctcgcagcggcccctctacacggccatctct
gaccccagcccctcagggccccagtcccacagccccacacactgggagcagccagtatat
acaacgctgtcccggccttaa
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integrated database retrieval system