Ailuropoda melanoleuca (giant panda): 100481074
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Entry
100481074 CDS
T01329
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100481074 (GAPVD1)
Membrane trafficking [BR:
aml04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100481074 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
100481074
NCBI-ProteinID:
XP_002916359
Ensembl:
ENSAMEG00000016598
LinkDB
All DBs
Position
7:50885028..50959879
Genome browser
AA seq
1460 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLSRLRENPRLIASSLVAGEKL
NQENTQSVIYTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPSKLIDRFSPLQQEKLFGEKGS
DRFRQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRTKSSLGKFDKSCVAAFLDVVIGGRAVETPPMSSVNLLEGLSRTVVFITYSQLITLVNF
MKSVMSGDQLKEDKMALDNLLANLPQAKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPI
ATRSRSRTNVLMDLHMDHEGSSQETIQEVQPEEVLVISLGTGPQLTPGMMSENEVLNMQL
SDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELG
AGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVL
GSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVL
PSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPN
KIEDLRSECSSDFGGKDSVTSPDMDEVTHGAHQLTSPPSQSESLLAMFDPLSTHEGASAV
VRPKVHYARPSHPPPDPPILEGAVGGNEARLPNFGSHVLTPAEMEAFRQRHSYPERLVRS
RSSDIVSSVRRPMSDPSWNRRPGNEERELPPAAAIGATSLVAAPHSSSSSPSKDSSRGET
EERKDSDDEKSDRNRPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDVGPDRFSTLTDDPSP
RLSAQAQVAEDILDKYRNAIKRTSPSEGAMANYESTEVMGDGESAHDSPREETLQNISAD
DLPDSASQAAHPQDSAFSYRDAKKKLRLALCSADSVAFPVLTHSTRNGLPDHTDPEDNEI
VCFLKVQIAEAINLQDKNLMAQLQETMRCVCRFDNRTCRKLLASIAEDYRKRAPYIAYLT
RCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIHDFQQLTAA
DDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDI
LRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCIL
RMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEES
YWWMQFTAAVEFIKTIDDRK
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggatattcatactttggcccatcacctcaaacaggaacgcttgtatgtg
aactctgagaaacagctcattcagaggctcaatgcagatgtacttaagacagctgaaaag
ttgtatcgtacagcatggattgctaagcaacagagaattaatttggaccggcttatcata
accagtgccgaagcctcccctgctgaatgttgccaacatgccaagattttggaggataca
cagtttgttgatggatataagcaattgggatttcaggagactgcttatggagaattcttg
agtcgtttaagggaaaatcctcgtcttattgcctcctccttggttgctggggagaaactt
aatcaggagaacacacaaagtgttatttacacagtttttacctccctctatggcaactgc
attatgcaagaagatgaaagctacctccttcaggttttgagatacttgattgaatttgaa
cttaaagaaagtgacaaccccaggcgacttctgaggagaggaacttgtgccttcagcatc
ttatttaaacttttttctgaaggactgttttctgccaaacttttcctcacagctacttta
catgagccaatcatgcaattgcttgttgaagacgaagatcacctggaaacagatccaagc
aagctaattgacaggttctccccattacaacaggaaaaactctttggagagaaaggctca
gatagattcaggcaaaaggttcaagagatggtggattccaatgaggccaaactggtggct
ctggtgaacaagtttattggttatctcaaacagaacacgtactgctttccacacagtttg
aggtggattgtgtctcagatgtacaaaaccctctcctgtgtagacagactggaagttggg
gaggtcagggcaatgtgtactgacctcctgttggcgtgcttcatttgtcctgcagttgtc
aatccagaacagtatggaataatttctgatgcgcctattaatgaagtggcaagatttaat
ctgatgcaggttggccgccttttgcagcaattggcaatgacaggctctgaagagggagat
ccccggacaaagagcagccttggaaaatttgacaaaagctgtgttgctgcttttcttgat
gttgtgattgggggccgtgcagtggagacccctccaatgtcctccgttaatcttctggaa
ggattgagcagaactgtggtttttataacctatagtcagcttattactctggtgaatttc
atgaagagtgtgatgtctggagatcaactgaaagaagataagatggctcttgacaattta
ttggcaaacctgccccaggcaaagccgggaaaaagcagcagtttggaaatgactccctat
aatactcctcagctgtctccagcaaccactccagcaaataaaaagaatcgattgcctata
gcaactcgaagtagaagccgcaccaatgtgctaatggacttacatatggaccatgaggga
tcatctcaagaaaccatccaggaagtacagccggaagaggtgttggtcatttccttaggg
acaggtccccaactcactccagggatgatgtcggaaaatgaggtcctaaacatgcaactt
tcggatggaggacaaggagatgtccccgttgatgaaaacaaactccacggtaaacctgat
aaaaccttgcgcttttccctctgcagtgataatctggaaggaatatctgaaggtccgtca
aatcgctccaattcagtatcctctctagacctggaaggagagtctgtatcagaacttgga
gcaggaccttctgggagtaatggagttgaagctctacagctattagagcatgagcaagct
acaacacaagataatcttgatgataagctaaggaagtttgaaatacgtgacatgatggga
ctgacagatgacagagatatatcagaaacagtgagtgagacctggagtacagatgtcttg
ggaagtgatttcgaccctaacattgatgaggatcgcttacaagagattgcaggtgcagca
gcagagaacatgttaggcagtttactgtgcctgccaggttcagggtcagtgcttcttgac
ccctgcactggttctaccatatcagagacaacaagcgaagcttggagtgtagaggtattg
ccaagtgactcagaggccccggacctaaagcaggaggagcgtctgcaagagctggagagc
tgttctggactaggtagcacatctgatgatacagatgtcagggaggtcagttcccgcccc
agcacaccaggcctcagtgttgtgtcgggcataagtgcaacatccgaggatattcccaat
aagattgaagacctgagatctgagtgcagctctgattttgggggtaaagattctgtcact
agtccagacatggatgaagtaactcatggcgcccaccagctgacctctcctccttctcag
tcagagtctctacttgccatgttcgatccactgtctacacatgaaggggcttctgccgtg
gtaaggccaaaggttcactatgccaggccatcgcatccaccaccagatcccccaatcctg
gaaggagctgtgggaggaaatgaggccaggttgccaaacttcggttcccatgttttaact
ccagctgaaatggaggccttcaggcaaaggcattcttaccctgagagattagttcgcagc
aggagctctgatatagtatcatctgtccggcgacctatgagtgaccccagctggaaccgg
cgtccagggaatgaagagcgagagctccctccagccgcagccattggtgctacttctttg
gtggctgcacctcattcatcgtcttcatccccgagtaaggactcctcaagaggagagact
gaagaacgcaaagatagcgatgatgagaaatcagacaggaacagaccttggtggagaaaa
cgttttgtttctgccatgcctaaagctcctataccatttagaaagaaagaaaaacaagaa
aaagacaaagatgatgtggggcctgacagattctcaacactcacagatgaccccagccct
agactcagtgcacaagctcaggtcgctgaggatattctggacaaatacaggaatgccatt
aagcgaaccagccccagtgaaggagcaatggcaaactatgaaagtacagaggtcatgggt
gacggcgagagtgcacatgactctcctcgagaggaaacactgcagaacatctcggccgac
gatctcccggactctgcgagccaggcggcccaccctcaggattctgcattctcctacaga
gacgcaaaaaagaaactgaggcttgctctttgctctgcggattctgttgctttcccagtg
ctaactcattcaacaaggaacggcttaccagaccatacagacccagaggacaacgaaatt
gtatgcttcttaaaagttcaaatagctgaagcaattaatttacaagataagaacttaatg
gctcaacttcaagaaacaatgcgttgtgtgtgccgctttgataaccgaacttgtaggaaa
ctgctggcctctatcgctgaggactacaggaaaagggcgccctatattgcttatctcact
cgctgtcggcaaggactgcagaccacgcaggcccacctggagaggctgctgcagagggtc
ctgcgggacaaagaggtggccaatcggtacttcaccacggtctgtgtgaggttgctgctt
gagagcaaagagaagaagatcagggaattcattcacgactttcagcagctcacggcagct
gatgataaaactgctcaggtagaagattttctgcagttcctttatggcgcgatggcccag
gacgtcatatggcagaatgcgagcgaggagcagcttcaggacgcccagctggccatcgaa
cggagcgtgatgaatcggattttcaagcttgctttctaccctaaccaggatggggacatc
cttcgtgaccaggttcttcatgaacatattcagagattgtctaaagtggtgactgccaat
cacagagctcttcagataccggaggtttatcttcgggaggcaccgtggccatctgcacag
tcggaaatcaggacaataagtgcttacaagaccccccgggacaaagtacagtgcatcctg
cgaatgtgctccaccatcatgaacctcctgagcctggccaacgaggactccgtccccggg
gcagatgacttcgtccctgttttggtatttgtgttgataaaggcaaatccgccctgcttg
ctgtccactgtccagtatatcagcagcttttatgccagctgtctgtctggagaggaatcc
tattggtggatgcagttcacagcagcagtggaattcattaaaactatcgacgaccgaaag
tga
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