Ailuropoda melanoleuca (giant panda): 100481078
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Entry
100481078 CDS
T01329
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100481078 (MSH4)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Meiosis-specific proteins
Others
100481078 (MSH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
ATPase_2
AAA_23
AAA_21
Motif
Other DBs
NCBI-GeneID:
100481078
NCBI-ProteinID:
XP_002916958
Ensembl:
ENSAMEG00000003606
UniProt:
G1LAB4
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All DBs
Position
2:47937368..48021487
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AA seq
932 aa
AA seq
DB search
MLRPEVSSILPSVAAASPALGEARSQGPRYNFGLQETPQSRSSAQASVSTPGTSGAAGDR
SSSTSLPRHPPRARPAPGLYFGNKKSNAENTFASNFTFATSSSSARDNNYPQILKTPLSA
GNPQRSGYKSWTPQMGYSATSSSAVSTHSPSVIVAVVEGRGLARGEIGMASIDLKSPQII
LSQFADNTTYAKVITKLKILSPLEIIMSNTACVVGNSTKLFTLITENFKNVNFTTVQRKY
FNETKGLEYIEQLCVTEFSTVLMEVQSKYYCLAAVAALLKYVEFIQNSVYAPKSLKICFQ
GSEQTAMIDSSSAQNLELLINNQDCRNNHTLFGVLNYTKTPGGSRRLRSNILEPLVDIET
INMRLDCVHELLQDEELFFGLQSVISRFLDTEQLLSVLVQIPKQDTVNAAESKITNLIYL
KHTLELVDPLKIALRNCSTPLLRAYCGSLEDERFGIILEKIKTIINDDARYMKGCLNMRT
QKCYAVRSNINEFLDIARRTYTEIVDDIAGMISQLAEKYSLPLRTSFSSARGFFIQMTTD
CTALPNNQLPSEFIKISKVKSSYTFTSADLIKMNERCQESLREIYHMTYMIVCKLLSEIY
EHIHCLYKLSDTVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKISVEKPIA
NNTYITEGSNFLIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYSSFRIAEQIFTRIS
TDDDIETNSSTFMKEMKEIAYILHNANNKSLILIDELGRGTNTEEGIGICYAVCEYLLSL
KAFTLFATHFLELCHIEVLYPNVENMHFEVQHVKNTSRNKEEILYTYKLCKGLTEEKNYG
LKAAEVSSLPPSIVLDAKEITTQITRQILQNQRSTPEMERQRAVYHLATRLVQTARNSQL
DPDSLRMYLSNLKKKYETDFSRAEEVSGKTEE
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggcctgaggtctcgtcaatcttgccgtctgttgctgcggcttcccccgcattg
ggagaggctcggtctcagggtcctcgctataatttcggactccaggagactcctcagagc
cgctcttcagcgcaggcctctgtgtccactcctggcacgtctggagccgccggcgaccgg
agcagcagcacaagtctgcctcgccacccgcctcgtgcccggccagccccaggtttatac
tttggaaacaaaaaatctaatgcagaaaatacatttgcatcaaattttacttttgctaca
agctcatcttctgcacgagataataattatcctcaaatactgaaaactccattgtctgct
ggaaatccccagagatcaggttataaaagttggacaccacaaatgggttattcagctaca
tcatcatctgcagtttcaacacactccccatccgttattgtagctgttgtagaaggtaga
ggacttgccagaggtgaaataggaatggcaagtattgatttaaaaagcccacaaattata
ttatctcagtttgcagacaatacaacatatgcaaaggtgatcactaaactcaaaatttta
tcacctttggaaataataatgtcaaatactgcttgtgttgtggggaattcaactaagttg
tttactttgataacagaaaatttcaagaatgttaattttactactgtccaaaggaaatac
ttcaatgaaacaaaaggactagagtacattgaacagttatgcgtaacagaattcagcact
gtcctaatggaggttcagtccaagtattactgccttgcagctgttgcagctttattaaaa
tatgttgaatttatacaaaattcagtttatgcaccaaaatcgctgaagatttgtttccag
ggtagtgaacagacagccatgatagattcatcatcagcccaaaaccttgaattactaatt
aataatcaggactgtaggaataatcacacactctttggtgttctaaattatactaagact
cctggagggagtagaagacttcgttctaatatattagaacctctagttgatattgaaacc
attaacatgagattagattgtgttcacgaactacttcaagatgaggaactcttttttgga
cttcagtcagttatatcaagatttcttgatacagagcagcttctttctgttttagtccaa
attccaaagcaagacacggttaatgcagctgaatcaaagataacaaatttaatataccta
aaacataccttggaacttgtggatcctttaaagattgctttgaggaactgtagcacacct
ttattaagagcttactgtggttccttggaagatgagaggtttggaattatacttgaaaag
attaagactataattaatgatgacgcaagatacatgaaaggatgcctgaacatgaggact
cagaagtgctatgcagtgagatccaacataaatgaatttcttgacatagctagaagaaca
tatacagagattgtagatgacatagcaggaatgatatcacagcttgcagaaaaatacagt
cttcctttaaggacaagttttagctctgctcgaggatttttcatccagatgactacagat
tgtacagccctacccaataatcaacttccttcagaatttattaagatatctaaagtgaaa
agttcttatacctttacatcagcagacttaattaaaatgaatgaaagatgtcaagaatct
ttgagagaaatctaccacatgacttatatgatcgtgtgcaaactgcttagtgagatttat
gaacatattcattgcttatataaactgtctgacactgtgtcaatgctggatatgctactg
tcatttgctcatgcctgcactctttctgactatgttcgaccagaatttactgatacttta
gcaatcaaacaggggtggcatcccattcttgaaaaaatatctgtggaaaaacctattgcc
aacaatacctatattacagaaggaagtaattttttgatcataactggacctaatatgagt
gggaaatccacatatttaaaacagattgctctttgtcagattatggcccagattggatca
tatgttccagcagaatattcttcctttagaattgctgaacagatttttacaagaatcagt
actgatgatgatattgaaacaaattcatcaacattcatgaaggaaatgaaagagatagct
tacattctacataatgctaataacaaatcacttatattaattgatgaacttggcagaggt
actaatacggaagagggtattggcatttgttatgctgtttgtgaatatctgctgagctta
aaggcatttacactatttgctacacatttcctggaactatgtcatatagaggtcctgtat
cctaatgtagaaaacatgcattttgaagttcagcatgtaaagaacacttcgagaaataaa
gaagaaatcttgtatacctacaaactttgtaagggactcacagaagaaaaaaattatgga
ttaaaagctgcagaggtgtcatcactcccaccatcaattgtcttggatgccaaagaaatc
acaactcaaattaccagacaaattttgcaaaaccaaaggagtacccctgagatggaaaga
cagagagctgtgtaccatctagctactaggcttgttcaaactgctcgaaactctcaactg
gatccagacagtttacgaatgtatttaagtaatctcaaaaagaagtatgaaacagatttt
tccagggctgaagaagtttcaggaaagactgaagaataa
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