KEGG   Ailuropoda melanoleuca (giant panda): 100481142
Entry
100481142         CDS       T01329                                 
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
  KO
K06675  structural maintenance of chromosome 4
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aml03036]
    100481142 (SMC4)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Chromosome condensation proteins
   Condensin I
    100481142 (SMC4)
   Condensin II
    100481142 (SMC4)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_21 AAA_29 ABC_tran
Other DBs
NCBI-GeneID: 100481142
NCBI-ProteinID: XP_002930509
Ensembl: ENSAMEG00000002220
UniProt: G1L685
LinkDB
Position
1:complement(100169451..100206162)
AA seq 1288 aa
MPRKGTQPSTARRRREEPPQSPDGTSSDAEPEPPPGRAGSPTAATAETPSEEIDNRSLEE
ILNSIPPPPPPAMANEAGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKS
NVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPN
SNFYVSRTAYRDNTSVYHISGKKTTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP
KGQTEHDEGMLEYLEDIIGCGRLNEPIKILCRRVEILNEHRGEKLNRVKLVEKEKDALEE
EKNIAIEFLTLENEIFRKKNHVCQYYIYDLQKRIAEMETQKEKIHEDTKEINEKSSILSN
EMKAKNKAVKDAEKKLNKITKFIEENREKFTQLDLEDVQVREKLKHASSKAKKLEKQLQK
DKEKVEEFTSIPAKSEKIITERTTQNSDLEKEKEKEEQKLKEVMDSLKQETQGLQKEKES
REKELMGFSKSVNEARSKMDVAQSELDIYLSRHNTAVSQLSKAKEALIAASETLKERKAA
IREIEAKLPQSELELKEKEKELQKLTQEEIKLKSLVRDLFQKVEEAKSSLAINRSRGKVL
DAIIQEKKSGRIPGIYGRLGDLGAIDEKYDVAISSCCHALDYIVVDSIDTAQDCVNFLKR
QNIGVATFIGLDKMTVWANKMTKIQTPENTPRLFDLIKVKDEKIRQAFYFALRDTLVADN
LDQATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSSVVVEISEEEVNRME
SQLERDSKKAVQIQEQKVQLEEAVVKLRHNEREMRNTLEKFTASIQRLSEQEEYLNVQVK
ELEANVLATAPDKKKQKLLEENVSVFKAEYDNVAERAGKVEAEVKRLHNIIVEINNHKLK
AQQDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQDSVFRTEKDIKDTEKEIDDLTA
EQKSIEDKAAEVVKNTNAAEESLPEIQKEHRNLLQELKRIQENEHALQKDALSIKLKLEQ
IDGHIAEHNSKIKYWQKEISKISLHLIEDNPLEEIAVLSPEDLEAIKNPDSITNQIALLE
AQCHEMKPNLGAVAEYKKKEELYLQRVAELDKITCERDQFRQAYEDLRKQRLNEFMAGFY
IITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSS
LALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISD
RLIGIYKTYNITKSVAVNPKQIASKGLC
NT seq 3867 nt   +upstreamnt  +downstreamnt
atgccccgtaaaggcacccaaccttccaccgcccggcgcagaagggaagagccgccgcag
tccccggacggcaccagtagcgacgcggagccggaacccccgcccgggcgcgcgggcagc
ccgactgctgctaccgcagagacaccaagtgaggaaattgataatagaagtttagaagag
attttgaatagcatccctcctcccccgcctccagcaatggccaatgaagctggagctcct
cggcttatgataactcatattgtaaaccagaacttcaaatcctatgctggggaaaaaatt
ctgggaccttttcataagcgcttttcctgtattattgggccaaatggcagtggcaaatcc
aatgttattgattctatgctttttgtgtttggctatcgagcacaaaaaataagatctaaa
aaactttcggtattaatacacaattctgatgaacacaaggacattcagagttgtactgta
gaagttcactttcagaagataattgataaggaaggggatgattatgaagtcattcctaac
agtaacttctatgtatccagaactgcctacagagataatacttctgtctatcacataagt
gggaaaaagacaacatttaaggatgttggaaatcttcttcgaagccatggaattgacctg
gaccataatagatttttaatcttgcagggtgaagttgaacaaatcgctatgatgaaacca
aaaggccagactgaacatgatgagggtatgcttgaatatttagaagatatcattggttgc
ggacggctaaatgagcctatcaaaatcttgtgtcggagagttgaaatattaaatgaacat
agaggagagaagttaaacagagttaaactggtggaaaaggaaaaggatgccttagaagaa
gagaaaaacatagccattgaatttcttaccttggaaaatgaaatatttagaaaaaagaat
cacgtctgtcaatattacatttatgatctacagaaacgaattgctgaaatggaaactcaa
aaggaaaaaattcatgaagataccaaagaaattaatgagaagagcagtatactgtcaaat
gaaatgaaagctaagaataaagctgtaaaagatgcagagaagaaactgaataaaattaca
aaatttattgaggaaaacagagaaaaatttacacaactagatttggaagatgttcaagtt
cgggaaaaattaaaacatgcttcaagtaaagccaaaaaactggagaagcaacttcaaaaa
gataaagagaaagttgaagaatttacaagtatacctgccaagagtgagaagataataact
gagagaacaactcaaaacagtgaccttgagaaggaaaaagagaaagaagaacaaaaatta
aaagaagttatggatagccttaaacaggaaacgcaagggcttcagaaagaaaaagaaagt
cgagagaaagaacttatgggtttcagtaaatcagtaaatgaagcgcgttcaaagatggat
gtagcccagtcagaacttgatatctatctcagtcgtcataatactgcggtgtctcaatta
agtaaggccaaggaagctctaattgcagcttctgagactctcaaagagaggaaagctgca
atcagggaaatagaagcaaaactccctcaatctgaactggaattaaaggagaaagaaaaa
gaacttcaaaaacttacacaagaagaaataaaattaaaaagtttggttcgtgatcttttc
caaaaagttgaagaagccaagagttccttagcaatcaatcgaagtagggggaaagtcctt
gatgcaataattcaagaaaaaaaatctggcaggattccaggaatatatggaagattgggg
gatttaggagcaattgatgaaaaatatgatgttgctatttcatcctgttgtcatgcatta
gactacattgttgttgattctattgatacagcccaagattgtgtgaacttccttaaaaga
cagaatattggagttgcaacctttataggtttggataagatgacagtatgggcgaataaa
atgaccaaaattcaaactcctgaaaatactcctcgtttatttgatttaataaaagtaaaa
gatgagaaaattcgccaagctttttactttgctttacgggataccttagttgctgacaac
ttagatcaagccacaagagtagcgtatcaaaaagatagaagatggagagtggtgacatta
caggggcaaatcatagaacagtcaggtacaatgactggtggtggaagcaaagtaatgaaa
ggaaggatgggttcatcagttgttgttgaaatctcggaagaagaggtaaacagaatggaa
tcgcagttggagagagactctaaaaaagcagtgcaaatccaggaacagaaagtacaactg
gaagaagcggtagttaagttaaggcataatgaacgagaaatgaggaatacgctagaaaaa
tttactgcaagcatccagcgtttatcagagcaagaagaatatttgaatgtccaagttaag
gaacttgaagctaatgtacttgctacagcccctgacaaaaaaaagcagaaattactagaa
gaaaatgttagtgttttcaaagcagaatatgataatgtggctgagagagctggtaaagta
gaagctgaggttaaaagattacacaatatcatcgtagaaatcaataaccataaactcaag
gcccaacaagacaaacttgataaaataaataagcagttagatgaatgtgcttctgctatt
actaaagcccaagtagcaatcaagactgctgacagaaatcttaaaaaagcacaagactca
gtctttcgcacagagaaagacataaaagacactgagaaagaaatagatgatttaacagca
gaacaaaaaagtattgaagacaaagcagcagaggtcgtaaagaacacaaatgctgcagag
gagtccttaccagaaatccaaaaagaacatcgtaacctacttcaagaactaaaaagaatt
caagaaaatgaacatgctcttcaaaaagatgcactgagtattaagttgaaacttgaacaa
atagatggtcacattgctgaacataattctaaaataaaatattggcaaaaagagatttca
aaaatatcattgcatctcatagaagacaatcctcttgaagagattgcagttttaagcccc
gaggatcttgaagcaatcaagaacccagattctataacaaatcaaatcgcacttttagaa
gcccagtgtcatgaaatgaaaccaaaccttggtgccgttgcagagtataaaaagaaggaa
gaattatatttacagcgggtagcagaattggacaaaattacttgtgaaagagatcagttt
agacaggcatatgaagaccttcggaaacaaaggcttaatgaattcatggcaggtttttat
ataataacaaataaattaaaggaaaattaccagatgctaactttgggaggtgatgctgaa
ctggagcttgtagacagcttggatcctttctccgaaggaatcatgttcagtgttcgacca
cctaagaaaagttggaagaagatcttcaatctttcaggaggagagaaaacacttagttcg
ttggctttagtatttgctcttcaccactacaaacctactcctctgtacttcatggatgag
attgatgctgcccttgattttaaaaatgtgtccattgttgcattttatatatacgagcaa
acaaagaatgcccagttcataataatttctcttcgaaataatatgttcgagatttcagac
agacttattggaatttacaagacatacaatataacaaaaagtgttgcagtaaacccaaaa
caaattgcatctaaaggactttgttga

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