Ailuropoda melanoleuca (giant panda): 100481180
Help
Entry
100481180 CDS
T01329
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100481180 (KDM1B)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100481180 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Pyr_redox_2
Pyr_redox
Thi4
SWIRM
DAO
HI0933_like
FAD_binding_3
Pyr_redox_3
Lycopene_cycl
FAD_oxidored
FAD_binding_2
NAD_binding_9
GIDA
2-Hacid_dh_C
AlaDh_PNT_C
NAD_binding_7
Phage_zn_bind_8
KARI_N
zf-RING_2
TrkA_N
Shikimate_DH
YjeF_N
Motif
Other DBs
NCBI-GeneID:
100481180
NCBI-ProteinID:
XP_011226675
Ensembl:
ENSAMEG00000008386
LinkDB
All DBs
Position
5:complement(8902991..8962366)
Genome browser
AA seq
818 aa
AA seq
DB search
MATPRRRTKKKASFDHSPDSLPLRSSGRQAKKKATETTDEDEDGGSEKKYRRCEKSGCTV
ACPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTTWKKIWTSN
GKTEPSPKAFMADQQLPYWVQCTIPECRKWRQLTKEIHLTPQIARTYRCGMKSNTTIKPE
TSDHCSLPEDLRVSEVSNHWWYSMLIQPPLLKDSVAAPLLSAYYPDCVGMSPSCASTHRA
ASSSSPGKLEHSKAVPSALGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSRDP
TMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKGLINT
GVLSVGTDQHLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDD
KSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMHKFGERCDLIQEGGRVTDPTIDKRMD
FHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFMKESGIQFSELEEQVRHFHLSNLE
YACGSSLQQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIRLESPVQSIDYS
GDEVQVTITDGTGCTAQKVLVTVPLALLQRGAIHFNPPLSDKKMKAINSLGAGIIEKIAL
QFPYRFWDGKVQGADFFGHVPPSASKRGLFAVFYDMDPQKQHSVLMSVVAGEAVASIRTL
DDKQVLQQCMAVLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAE
EIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaccacggaggaggacaaagaaaaaagcatcttttgatcattctccggatagc
ctgcctttgaggagctccggtaggcaggcgaagaaaaaagcaacagaaacgacagacgag
gatgaggacggcgggtcagaaaagaagtacaggagatgtgagaagtcaggctgcacagta
gcgtgtcccgtgtgctttgcaagcgcttctgaaaggtgtgccaaaaacggctacacatcc
cgatggtatcacctctcctgtggggagcatttctgtaatgaatgctttgaccattactac
agaagccataaggacggatatgacaaatatactacctggaaaaaaatatggactagcaat
ggaaaaactgaacctagtcccaaagctttcatggcggaccagcagctcccctattgggtt
cagtgtacaatacccgagtgtagaaaatggagacaacttaccaaggaaatccaccttact
ccacagatagcaaggacttaccgatgtggtatgaaatcaaatactactattaagcccgag
acctcagatcattgttcccttccggaggacctaagagtgtcggaagtgtccaaccactgg
tggtactccatgcttatccaacctcctttgctgaaagacagcgtggccgcacccctgctc
tccgcctactaccccgactgcgttggcatgagcccctcctgcgccagcacacaccgcgca
gccagcagcagcagccccgggaagctggagcactccaaggcagtcccctctgcgctgggc
atgaaccggtacttccagcctttctatcagcccaacgagtgtggcaaagccctgtgcgtg
aggccggacgtgatggagctggacgagctctacgagttccccgagtattcccgagacccc
accatgtacctggctttgcggaacctcatcctcgccctgtggtacacgaactgcaaagaa
gccctcacccctcagaagtgtattcctcacatcatcgtccggggtctcgtgcgtatccgg
tgcgttcaggaagtggagaggatactttattttatgacaaggaaaggtctcatcaacaca
ggagttctcagcgtcggcaccgaccagcatcttcttcctaaagattaccacaacaaatca
gtcatcattatcggggctggtccggcaggattagcagctgcgaggcaactgcataacttt
ggaattaaggtaactgtgctggaagccaaagaccgaattggaggccgagtatgggatgat
aaatcttttaaaggcgtcacagtgggaagaggagcccagattgtcaatggctgtatcaac
aacccagtagcactaatgtgtgaacaacttggcatcagcatgcataaatttggagagaga
tgtgacttaattcaggaaggtggacgagtaactgaccccactattgacaagcgcatggat
tttcattttaatgctctcttggatgttgtctctgagtggagaaaggataagactcagctc
caagatgttcctttaggagagaagatcgaggagatctacaaagcctttatgaaggagtcc
ggcatccagttcagcgagctcgaggagcaggtgcgccacttccacctcagcaacctggag
tacgcgtgtggcagcagcctccagcaggtgtctgctcgctcctgggaccacaacgaattc
ttcgcccagttcgctggtgaccacactctgctaacgcctggctactccgtcatcattgaa
aaactggcagaaggcctagacattcggctcgagtctccagtgcagagcatcgattactcc
ggggatgaagtgcaggttaccattacggatgggacagggtgtacagcacaaaaggtatta
gtcactgttccactggccttactgcagaggggtgccattcactttaacccaccgctgtca
gacaagaagatgaaggctatcaacagcttaggcgcgggcatcattgaaaagattgccttg
caatttccttatcgattttgggacggtaaagttcaaggggctgactttttcggtcacgta
cctcctagcgccagcaagcgggggctttttgctgtgttctatgacatggatccccagaag
cagcacagcgtgctgatgtcggtggtggccggggaggcggtggcgtccatccggaccctg
gatgacaagcaggtgctacagcagtgcatggctgtcctgcgggagctgttcaaggagcag
gaagtcccggatcccaccaagtatttcgtcactcggtggagcacggacccctggatccag
atggcgtacagctttgtgaagacgggcggcagcggagaggcctacgacatcattgccgag
gagatacagggcacggtcttcttcgcgggcgaggcaacaaacaggcattttccacaaact
gttacaggggcatacttgagtggtgttcgagaagcaagcaagatcgcagcattttga
DBGET
integrated database retrieval system
