Ailuropoda melanoleuca (giant panda): 100481192
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Entry
100481192 CDS
T01329
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100481192 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100481192 (DHX36)
03012 Translation factors [BR:
aml03012
]
100481192 (DHX36)
Enzymes [BR:
aml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100481192 (DHX36)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100481192 (DHX36)
Translation factors [BR:
aml03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100481192 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
NPHP3_N
DUF6782
RsgA_GTPase
AAA_23
AAA_34
NACHT
Motif
Other DBs
NCBI-GeneID:
100481192
NCBI-ProteinID:
XP_002924750
Ensembl:
ENSAMEG00000011721
UniProt:
G1LZ43
LinkDB
All DBs
Position
1:105532098..105580708
Genome browser
AA seq
1009 aa
AA seq
DB search
MSYDYHQNWGRDGGPRSSGGGYGGSYGGGHGGGHGGNRGSGGGGGGGGRGGRGRHPGHLK
GREIGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAKNGKDSEAQISWFA
PEDHGYGTETPTENKPNSEKKLENQEKKLISQEKRTFRIRDKYIDRDSEYLLQENEPDVT
LDQQLLEDLQKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQ
VTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSR
LPRKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLSFRPD
LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEHRSQFK
RGFMQGHVNRQEKEEKEAIYKERWPDYVRELRKRYSASTVDVLEMMDDEKVDLNLIAALI
RHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKR
TPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSQANAKQR
KGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLM
DPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVL
TIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKD
YCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAVICAGL
YPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRTSSIYL
YDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQE
KIESPHPVDWKDTKSRDCAVLSAIIDLIKTQEKASPRNFPPRSLDGYHS
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgattaccatcagaactggggtcgcgatggcgggcctcgcagctccggcggg
ggctacggaggaagctatggtgggggccatggaggaggccatggagggaaccgaggctcc
ggaggcggcggcggaggaggtggtcgaggcggccgaggccgacatcccgggcacctgaaa
ggccgcgaaatcggcttgtggtatgcgaagaaacagggacagaagaacaaggaagcggag
aggcaggagagagctgtagtacacatggatgaacggcgggaagagcagattgtgcagctg
ctgcattcagtccaagcgaagaatggtaaagactcagaggcccagatctcctggtttgct
cctgaagatcacgggtatggtactgaaactcctactgagaacaaacccaactcagagaag
aaacttgagaaccaggaaaagaaattgataagtcaagaaaagagaacatttagaattagg
gacaaatacattgaccgagattctgaatatctcttgcaagaaaatgaaccagatgtaacc
ttagaccaacaactattggaagatttacaaaagaaaaagagtgaccttcggtatattgaa
atgcagcatttcagggaaaagctgccttcatatggaatgcaaaaggaattggtaaatatg
attgataaccatcaagtaacagtaataagtggtgaaactggatgtggaaaaactactcaa
gttactcagttcattttggataactacattgaaagaggaaaaggatctgcatgcaggata
gtttgtactcagccaagaagaattagtgccatttcagttgcagagagggtggctgcagaa
agggcagaatcttgtggcaatggtaacagtactggatatcagattcgtctccagagtcgg
ttgccaaggaagcaggggtctatcttatactgtacaacaggaatcatcctgcagtggctc
cagtcagactcgcatttgtccagtgttagtcatattgtgcttgatgaaatccatgagaga
aatctacagtcagatgttctaatgacggttattaaagatcttctcagttttcgacctgac
ctgaaagtaatattgatgagtgcgactttaaatgctgagaaattttcagaatattttggt
aactgtccaatgatacacatacctggttttacttttccggttgtggagtatcttttggaa
gatataattgaaaaaataagatatgttccggaacaaaaagaacacaggtcccagtttaag
agaggtttcatgcaagggcatgtaaatagacaagaaaaagaagaaaaagaagcaatctat
aaagaacgttggccagattatgtaagggaactgcgaaaaaggtattctgcaagtactgta
gatgttctagaaatgatggatgatgagaaagttgatctgaatttgattgctgcccttatc
cgacacattgttttggaagaagaggatggtgcaatattggtctttctaccaggctgggac
aatatcagcactttacatgatctcctgatgtcacaagtgatgtttaaatcagacagattt
cttatcatacccctgcattcactaatgcctacagttaaccagacacaggtatttaaaaga
acccctcctggtgttcggaaaatagtaattgctaccaatattgcagagactagcattacc
atagatgatgtagtttatgtgatagatggaggaaaaataaaagaaacacactttgacacg
cagaacaacatcagtacaatgtctgctgagtgggttagtcaagctaatgccaaacaaagg
aaaggtcgagctggaagagttcaacctggtcattgctatcatctgtataatggtcttaga
gcaagccttctggatgactatcaactgccagaaattttgagaactcctttggaagaactt
tgtttacaaataaagattttaaggctaggtggaattgcttattttctgagtaggttgatg
gatccaccatcagatgaagcggtgtcactctccataaaacacctgatggaactgaatgct
ttggataaacaagaagaattgacaccccttggagttcacttagcacgattaccagttgag
ccacacattgggaaaatgattctttttggagctctgttctgttgtttagatccagtactc
accattgctgctagtctcagcttcaaagatccctttgtcattccattgggcaaagaaaag
attgcagatgcaagaagaaaagaattggcaaaagatactaaaagtgaccacctgacagtt
gtaaatgcatttgagggctgggaagaagctaggcgacgtggtttcagatacgaaaaagac
tattgctgggaatattttttgtcttcaaacacattgcagatgctgcataacatgaaagga
cagtttgctgagcatcttcttggagctggatttgtaagcagtagaaatcctaaagatcca
aaatctaatataaattcagataatgagaaaataattaaagctgtcatctgtgctggttta
tatcccaaagttgctaaaatccgactaaatttgggtaaaaaaagaaaaatggtgaaagtt
tacacaaaaactgatggactggttgctattcatcctaaatctgttaatgtggagcaaaca
gaatttcactacaactggcttatctatcatctgaagatgagaacaagtagtatatactta
tatgactgcacagaagtttctccatactgtctcttattctttggaggtgatatttccatc
cagaaggataacgatcaggaaaccattgctgtagatgagtggattgtctttcagtctcca
gcaagaattgctcatcttgttaaggaattaagaaaggagctagatatccttctgcaagag
aagatcgaaagtccccatcctgtagattggaaggacactaaatccagagactgtgctgta
ctgtcagctatcatagacttgatcaaaacacaggaaaaagcaagtcccaggaactttccg
ccacgatccctggatggatatcacagctga
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