Ailuropoda melanoleuca (giant panda): 100481214
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Entry
100481214 CDS
T01329
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100481214 (RBBP6)
Enzymes [BR:
aml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100481214 (RBBP6)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
U-box type E3
100481214 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
100481214
NCBI-ProteinID:
XP_002929268
Ensembl:
ENSAMEG00000009312
UniProt:
D2I221
LinkDB
All DBs
Position
10:complement(19990934..20020628)
Genome browser
AA seq
1790 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDDHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPRPLIQRNLQPLMRSPISR
QQDPLMIPVTSSSTHPAPSMSSLTSNPSSLAAPVPGNSSSTPAPVPDITATVSISVHSEK
SDGPFRDSDSKILPAAALAPEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQSLLHGQL
IPTTGPVRINTARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSERSQR
TQGPSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVPPPGF
PPAPANLSTTWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTND
FAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFSRSHS
RSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQSPNKR
NVPQGETEREYFNRYREVPPPYDMKAYYGRSVDFRDPFEKERYREWERKYREWYEKYYKI
GYATGAQPRPSTNRETFSPERFLPLNIRNSPFTRGRREDYAGGQSHRSRNLGGNYPEKLS
TRDSHNQKDNTKSKEKESENAPGDGKGNKHKKHRKRRKGEESEGFLNPELLETSRKSREP
TSGEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKREKDKPKAKGDKTKRKN
DGSTVSKKENVAKPAKGPQEKLDGEREKSPRSEPPLKKTKEETPKTDSAKSSSSSQKDEK
IIGTPRKAHSKSTKEHQETKPVKEEKVKKDYSKDVKSEKPTNKEEKAKKPSEKSKPPDSK
GEKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKPSPKRKMEPDIEKMDRTPEKDKISSS
SAPAKKIKLNRETGKKIGSTENVSNTKEPSEKLESTSSKVKQEKVKGKVRRKVAGADGSS
STLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTTPAEDVIIMIQVPQSKWD
KDDFESEEEDVKTTQPIPSVGKPASVIKNVSTKPLNTVKYTEKESESSEKIQKLTKEVSH
ELIQHEIKSSKNSASSEKGKTKDRDHSVLEKENPEKRKNSAQPEKDSNLDRLNEQGNFKS
LSQPSKETRTSDKHDSVRGSSTKDFTPNRDKKPDYDSRDYSSSKRRDERNELRRKDSPSR
SKDSVSGQKAKPREERDLPKKGTGDPKKSNSSPSRDKKPHDQRATYDTKRPSEETKPVDK
NPCKDREKHMLEARNNKESSGNKLPPYVLNPPDPQTEKEQVPGQTDKNAVKPKPQLSHSS
RLSSDLTRETDEAAFEPDYNESDSESNVSVKEEETSGKVSKELKDKVVEKAKDSLDPAAG
GQIGTARSQSQSSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHK
KHKKHKKHAGTEVELEKSQKHKHKKKKSKKSKDKEKEKEKDDQKVKSVPV
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataaattttcctctaaactcaactatgataccgtcacctttgat
gggctccacatctccctctgcgatttaaagaagcagattatggggagagagaagttgaaa
gctgccgactgcgacctgcagatcaccaacgcgcagacgaaagaagaatatactgatgat
aatgctctaattcctaagaattcatctgtaattgttagaagaattcctattggaggtgtt
aaatctacaagcaagacgtatgttataagtcgaactgaaccagtgatgggaacttcaaaa
gcaattgatgactcttctgcgtctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccaatcaattatatgaagaaacccctaggtccaccacctccatcttatacc
tgttttcgttgtggtaaacctggccattatattaagaattgcccaacaaatggggataaa
aactttgaatctggtcctaggattaaaaaaagcactggtattcccagaagttttatgatg
gaggtgaaagatcctaacatgaaaggtgcaatgctcaccaacactggaaaatacgcaata
ccaactatagatgcagaagcatatgcaattggaaagaaagaaaaaccacctttcttacca
gaggagccatcttcttcttcagaagaggatgatcctattccagatgaattgttgtgtctc
atctgcaaagatattatgactgatgctgttgtcattccctgctgtggaaacagttattgt
gatgaatgtataagaacagcactcttggaatcagatgatcatacatgtccaacatgccat
caaaatgatgtctctcctgatgctttaattgccaataaattcttacgacaggctgttaat
aacttcaaaaatgaaactggttatacaaaaagactacgaaaacagttacccccaccccca
cccccgagaccactcattcagcggaacctacaacctttgatgagatctccaatatcaaga
caacaggatcctctgatgattccagtgacatcttcatcaactcacccagctccttctatg
tcttccttaacttccaacccgtcgtctttggctgctcctgtgcctggaaattcatcttct
accccagctcctgtacctgatataactgcgacagtctccatatcagtccactcagaaaaa
tcagatggacctttccgggactctgatagtaaaatactgccggctgcagcccttgcgccc
gagcactcaaagggggcctcttcaattgcaatcactgctcttatggaggagaagggttac
caggtacctgtacttggaaccccgtctttgcttggacagtcactgttgcatggacagttg
atccccacaactggtccagtaagaataaacactgctcgtccgggtggtggtcggccaggc
tgggaacattccaataagcttggatatctggtttcaccaccgcagcaaattagaaggggg
gagaggagctgctacagaagtataaaccgcggacgacaccacagcgaaagatcacagaga
actcaaggaccgtcgctaccagcaacgccagtttttgtgcccgtgccaccccctcctttg
tacccgcccccaccccatacacttcctctccctccaggtgtgcctcctccacagttttct
cctcagtttcctcctggccagccaccacctgctggctatagtgtccctcctccaggcttt
cctccagctccggccaatttatcgacaacttgggtatcgtcaggagtgcagacagctcac
tcaaataccatcccaacaacacaagcacccccgttgtccagggaagaattctatagagag
caacgacggctaaaagaagaggaaaagaaaaagtccaagctagatgagtttacaaatgat
tttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtaggcgctcattttcc
aggtctaaatctccctatagtggttcatcatattcaagaagttcgtatacttattctaag
tcaagatctggttcaacacgttcacgttcttattctcgatcatttagccgctcccactct
cgttcctattcacgatcacctccataccccagaagaggcagaggcaagagccgaaattac
cgttcacggtctagatctcatggatatcatcgatctaggtcaaggtcacccccatataga
cgataccattcacggtcaagatctcctcaagcatttaggggacaatctcccaataaacgt
aatgtgcctcaaggggaaacagaacgtgaatattttaatagatacagagaagttccgcca
ccttatgacatgaaagcttattatgggaggagtgttgactttagagacccatttgaaaaa
gagcgttaccgagaatgggagagaaaatatagagagtggtatgaaaagtattataaaata
ggttatgctactggagcacagcctagaccatcaacaaatagagagaccttttctccagag
aggtttttgcctcttaatatcaggaattctcccttcacaagaggccgcagagaagattat
gctggtggacaaagtcataggagtcgaaatttaggtggcaactatccagaaaagctttca
acaagagacagtcacaatcagaaggacaacacaaagtcaaaagagaaggagagtgaaaat
gctccaggagatggtaaaggaaacaaacataagaaacataggaaaagaagaaagggggag
gaaagtgaaggctttctaaaccctgaattattagaaacttctaggaaatcaagagaacct
acaagtggtgaagaaaataaaacagactcgttgtttgttctcccaagtcgagatgatgct
acgcctgttagagatgaaccaatggatgcagaatctatcacttttaaatccgtgtctgaa
aaagacaagagggagaaagacaaaccaaaagcgaaaggtgataagaccaaacggaaaaat
gatggttctactgtgtccaaaaaggaaaacgttgcaaaacctgctaagggacctcaagaa
aaactagacggagagcgtgaaaaatctcctcgatctgaacctccacttaaaaaaaccaaa
gaggagactccaaagactgacagtgctaaatcatcatcttcctcccaaaaagatgaaaag
atcattggtacccccaggaaagctcactctaagtcgacaaaagaacaccaagagacaaaa
ccagtcaaagaggaaaaagtgaagaaggattactccaaagatgtcaaatcagaaaagcca
actaataaggaagaaaaggccaagaagcctagtgagaaaagtaagccacctgacagcaag
ggagaaaaacgaaaaagaaaaactgaagaaaagggtgtagacaaagattttgaatcctct
tcaatgaaaatctctaaactagaagtgactgaaatagtgaaaccatcaccaaagcgcaaa
atggaacctgatattgaaaagatggataggacccctgagaaagacaaaatttcatcatca
tctgctccagccaaaaaaatcaagctcaacagagaaactggtaaaaaaattggaagtaca
gaaaatgtatctaatacaaaagaaccctctgaaaaattggagtcaacatctagcaaggtt
aaacaagaaaaagtcaaaggaaaggtcagacgcaaagtagctggagctgacggatccagc
tcaacacttgtggattataccagtacgagctcaactggaggcagtcctgtgcggaaatct
gaagaaaaaacagatacaaaacgaactgtcattaaaactatggaagagtataataatgac
aatacaactcctgctgaagatgttattattatgattcaggttcctcagtccaaatgggat
aaagatgactttgaatctgaagaagaagatgttaagaccacacagcctataccaagtgta
ggaaaacccgccagtgttattaaaaatgttagcactaaaccattaaatacagtcaagtat
accgaaaaagaaagcgagtcatcagagaaaattcagaaactcaccaaggaagtgagccat
gaacttatacagcatgagatcaaaagttcaaaaaactctgcatccagtgaaaaggggaag
accaaagatcgagatcattcggtgttagagaaggaaaaccctgagaagaggaagaacagc
gctcagccagagaaggatagtaacttggaccgtctgaatgagcagggaaattttaaaagt
ctgtctcaaccttccaaagagacgagaacttcagataagcatgattccgttcgaggttct
tcaactaaagactttacccccaacagagacaaaaaacccgactatgacagcagagattac
tcaagttccaaacgtagagatgaaaggaatgaattaagaagaaaagactctccttctcga
agtaaagattctgtgtctggacagaaagctaagccaagggaggagagagatttgcccaaa
aaaggaacaggagatcccaaaaagagcaattccagtccctcaagagacaaaaaacctcat
gatcaaagagccacttatgatactaagcgcccaagtgaagagacaaaacctgtagataaa
aatccttgtaaagatcgtgagaagcacatgttagaagcaaggaacaataaagagtccagt
ggcaataaattaccaccgtatgtgcttaacccaccagacccacagactgaaaaagagcaa
gttcctgggcagactgacaagaatgcggtcaagccgaaaccgcagttaagtcactcctcc
cgactttcctccgacttaactagagaaactgacgaagctgcttttgaaccagactataat
gaaagtgacagtgaaagcaatgtgtctgtaaaagaggaggaaacttcaggaaaagtttct
aaggaattgaaagataaagtcgtggagaaagcaaaagacagcctggacccagcagcaggc
ggccagataggcacggccaggagccagagtcaaagcagccctagcgttagtccaagtaga
agtcatagcccttctggaagccaaacccgaagccacagcagtagtgccagctctgcagag
agtcaggacagcaagaagaagaagaagaagaaggaaaagaaaaagcacaagaaacataaa
aaacataagaagcataagaagcacgcaggcactgaagtagaattggaaaaaagccaaaaa
cacaaacacaagaagaagaagtcaaagaagagcaaagataaagaaaaggagaaggagaaa
gatgaccaaaaagtgaaatctgtccctgtataa
DBGET
integrated database retrieval system
