Ailuropoda melanoleuca (giant panda): 100481526
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Entry
100481526 CDS
T01329
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04360
Axon guidance
aml04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100481526 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
100481526 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aml04040
]
100481526 (TRPC4)
Ion channels [BR:
aml04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100481526 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100481526
NCBI-ProteinID:
XP_034520975
Ensembl:
ENSAMEG00000000136
UniProt:
D2HUI5
LinkDB
All DBs
Position
7:complement(77363860..77566936)
Genome browser
AA seq
982 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDSSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGVRTQHRRAADNLRRHHQYQEVMRNLVK
RYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTEQAAQASKESSNSA
DSDEKSDNEGSSKDRRKNFSLFDLTTLIHPRSAAIASERHNISNGSALVVQEPPREKQRK
VNFVTDIKNFGLFHRRSKQNAAEHNANQIFSVSEEVTRQQAERPLERNIQLESRGLASRG
DLNIPGLSEQCILVDHRERNTDTLGLQVGKRVCSFTSEKVVVEDTVPIIPKEKHAKEEDP
SIDYEANLTDTVTHEDYVTTRL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttctattacaaaaggaatgtgaatgccccctacagagatcgcatccctcta
aggatagtccgagcggaatcggaactctcaccatcagaaaaagcctacttaaatgctgtg
gaaaagggagattatgcaagtgtcaagaaatccctggaggaagctgaaatttattttaaa
atcaatattaattgcattgatcctcttggaagaactgctctcctcattgcaattgaaaat
gagaacttggagctcattgaactacttttaagctttaacgtctatgttggagatgctcta
ttacacgccatcaggaaggaagtcgtcggagctgtggagctgttactgaaccacaaaaag
cccagtggagaaaaacaggtgcctcccatactccttgataagcagttctctgaattcact
ccagacattacaccaatcattttggcagcgcatacaaataattatgagataatcaagctt
ctagttcagaaaggagtctcggtgcccagaccccacgaggtccgctgtaactgtgtggaa
tgcgtctccagctcagacgtggacagcctccggcactcacgctccagacttaacatctac
aaggccttggccagcccctctctcatcgcactgtccagtgaagaccctttcctcacagcc
tttcagctaagttgggagctgcaggagctgagtaaagtggaaaatgagttcaagtcggag
tacgaggagctgtcccgacagtgcaaacagtttgctaaggacctactggatcagacaagg
agttccagagaactggaaatcattcttaattacagagatgacagtagtctcatagaggaa
cagagcggaaatgatctcgcgagactcaaactggccataaagtatcgtcaaaaggagttt
gtcgctcagcccaattgccaacaactgcttgcatctcgctggtacgatgagttcccaggc
tggaggagacgccactgggcagtgaagatggtgacgtgtttcataataggacttcttttt
cccgtcttctctgtgtgctaccttatagctcctaaaagcccactgggactgttcatcaga
aagccatttatcaagttcatctgccatacagcgtcctatttgacttttttgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatatggggagaaattaaacaa
atgtgggatggtggacttcaagattacatccatgattggtggaatctaatggattttgtg
atgaattccctatatttggcaacaatctctttgaaaattgttgcatttgtaaagtacagt
gcacttaatccacgagaatcttgggacatgtggcatcccactctggtggctgaagcttta
tttgccatcgcaaacatcttcagttccttgcgcctgatctcgctgtttaccgcaaattct
cacctggggcctctgcaaatatctctgggaagaatgctcctggacattttgaagtttcta
ttcatatactgccttgtgttgctagcatttgcaaatggcctaaatcagttgtatttctat
tatgaagaaacaaaagggttaagctgtaaaggcatacgctgtgaaaagcagaataatgca
ttttcaacgttatttgagacactccagtccctgttttggtcgatatttggactgatcaat
ttatatgtgaccaatgtcaaagcacagcacgaattcactgagtttgttggcgccaccatg
tttgggacatacaatgtcatctctctggttgtcctactcaacatgttaatagctatgatg
aataactcttaccaactcattgctgaccatgcagatatagaatggaaattcgctcgaaca
aagctttggatgagttatttcgaagaaggagggactctgcctactcccttcaatgtcatc
ccaagccccaagtctctctggtacctgatcaaatggatatggacgcacctgtgcaagaaa
aagatgagaagaaagcctgaaagttttggaacaataggggtaagaacacagcataggcga
gctgctgataatttgagaagacatcaccaatatcaagaggtcatgaggaacctagtaaaa
cgatacgttgccgcaatgatcagagacgccaaaactgaagaaggtttgaccgaagagaac
tttaaggaactaaagcaagacatttccagtttccgctttgaagtgctggggttgctacga
ggaagcaaactctcgacagagcaggcggctcaggcctcgaaggagtcctccaattcagcc
gactcggatgaaaagagtgacaacgaaggcagtagcaaggacaggcgaaagaacttcagt
ctcttcgatttaaccacgctcattcacccccgatcagccgccatagcctccgagagacac
aacataagcaacggctcggccctggtggtgcaggagcccccgagggagaagcagagaaaa
gtgaattttgtgaccgatatcaaaaacttcgggttatttcacagacgatcaaaacaaaat
gctgctgagcacaatgcaaaccaaatcttctctgtttcagaagaagttactcgtcaacag
gccgagagaccactggagagaaatattcaactggaatctcgaggattagcgtcgcggggt
gacttgaacatccccgggctcagtgaacagtgtatattagtggaccaccgagaaaggaac
acggacaccctgggtttgcaggtgggcaagagagtgtgttccttcacgtcggagaaggtg
gtggtggaggacactgtgccaatcataccaaaggagaagcacgcaaaggaagaggaccct
agtatagactatgaggccaacctcacagacacagtcacccacgaggattacgtcaccacg
agattgtga
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