Ailuropoda melanoleuca (giant panda): 100481651
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Entry
100481651 CDS
T01329
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100481651 (SOX30)
Transcription factors [BR:
aml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100481651 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100481651
NCBI-ProteinID:
XP_019650665
Ensembl:
ENSAMEG00000006342
LinkDB
All DBs
Position
3:99746302..99771320
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AA seq
768 aa
AA seq
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MERARPEPKPQPRQLPRATPPRPLRPAPPQRPVEGASFRAAAAELPPSPPTSCAAAIATV
ASSCGEAQASGVQPAARRLLQAKPEQVLLLPPGPPLAQALDEGVVASPAQARLLQLRPEL
LLLPPPPPTSDGAPCRPELHPVQPRALHIKAEKQEQGPGLDLSAGTRRPMEAGPRASRAA
KVEGPGPTLDCRRGNEKKGKLEAEEVLRDVAKGGEGKNLATIREGVIKTEEPERLREDGR
LGTEPASNGLVHGSKEVILAQPSSAFGPHQQDLRIPLTLHTVPPGARIQFQGPPPSELIR
LTEVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFM
VWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWV
YQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTIYPYRSPTYSVVIPSLQNTITHPVGDA
PPAIQLPTPAVQRPSPISLFQPSVSSTAQVALQAPSLPLRPALPPQHFAGPSQTDTHQLH
SGASRSVKRPTPVSLENTNRIPTSASTVHARFATSTIQPPKEYPSVSTCPRSAPIPQAPP
IPHSHVYQAPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSM
PECLGYYEDRYQKHEAMFSALNRDYPFRDYPDERTHSEDSRSCESMDGTSYYNSHSHSGE
EYLNPMPQLDIGALENVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRNL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccagagccgaagcctcagccgcgccaactgccgcgggcgaccccg
ccgcgcccgctccgccctgctccgccccagcggccggtcgagggcgcctcctttagggct
gcggccgcggagctccctccgtcgcctcccacctcgtgcgcggccgccattgcgaccgtg
gcctcgtcgtgcggggaggcccaggcgtcgggtgtacagcccgccgcacggcggctgctg
caggcgaagccggaacaggtgttgctgctgccgccagggccaccgctggctcaggccctg
gacgaaggcgtcgtcgcttcgcccgcacaggcacggctgctgcagctgaggcccgagctg
ctgctgctgccaccaccgccgcccacgtccgacggcgccccctgcagacccgagttgcac
ccggtgcagccccgggcgctccacataaaggccgagaagcaagagcaggggcccggcttg
gatctgtccgcggggacgcgaaggcctatggaggcgggccctagggcctccagggctgcc
aaggtggaaggcccggggccaactctcgactgccgccgagggaacgaaaagaagggcaag
ttggaggcggaggaggtcctgagggacgtggcgaaaggcggggaaggcaaaaacctggcg
accatcagagaaggagtcatcaaaacggaggagcccgagagactccgcgaggacggcagg
ctgggcacggagcccgcgtccaatggcctggtccatggcagcaaagaagtcatcctagcc
cagccatccagtgcctttgggccacaccagcaagacctcaggatccctttgactctccac
acagtccctcctggggcccgcatccaatttcagggacctccaccttcagagctgatacgg
ttgaccgaggtccccttgacaccagtgcctattaaaatgcaatctttactggagccttct
gtaaaaattgaaaccaaagatgtcccgctcaccgtgcttccctcagatgcaggaatacca
gatactcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgcatttatg
gtttgggcaaggattcaccggccagcactagccaaagctaatccagcagccaacaatgca
gaaatcagcgtccagctcgggttagagtggaacaaacttagtgaggaacaaaagaaaccc
tattatgatgaagcacaaaagattaaagaaaagcacagagaggaatttcctggttgggtt
tatcaacctcgtccagggaagcgaaaacgcttccctctaagtgtttccaatgtgttttct
ggtaccacacagaatatcatctctacaaatcctacaacaatatatccttatcgctcacct
acctactctgtggtaattcccagcctacagaacaccatcactcatccagttggtgatgcc
ccacctgccatccagctgcctacacctgcagtccagcgcccaagccccatctcacttttc
cagcccagcgtctccagtactgcccaggtggccctccaggctccaagtctgccccttcgc
ccggcactcccaccccagcactttgctgggccttcccaaacagacactcatcagctgcat
tctggagccagtcgctctgtgaagagacccactcctgtctctctggagaacaccaacagg
attccaactagtgcaagtactgtccatgccagatttgcgacctcaaccatccaacctccg
aaggagtatcccagcgtttccacttgtcccagaagtgctccaatcccccaggctcctcct
attccacactcacatgtctaccaggctcctccccttggccacccagccacgttgttcggg
acaccaccacgattttcttttcatcacccttacttcctacctggacctcactacttccca
tcaagcacgtgcccttatagtcggcctccctttggctatggaaattttccaagttcaatg
ccagaatgccttggttattatgaagacaggtaccaaaaacatgaggctatgttttcagct
ttaaatagagactatccttttagagactacccagatgaacgtacacacagcgaagattct
cggagttgtgagagcatggatgggacctcttactataacagtcatagccacagtggggaa
gaatacttaaatcccatgcctcagctggacattggagccttggagaatgtcttcacagcc
ccaacatcaactccctctagcatccagcaagtaaatgtcactgacagtgatgaggaggaa
gaagaaaaagtgctcagaaatttataa
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