Ailuropoda melanoleuca (giant panda): 100481688
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Entry
100481688 CDS
T01329
Symbol
RNF13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100481688 (RNF13)
Enzymes [BR:
aml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100481688 (RNF13)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100481688 (RNF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
PA
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
DUF7027
Neur_chan_memb
FeoB_associated
Prok-RING_4
Foamy_virus_ENV
zf-RING_16
zf_RING_Vps8_fungal
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
100481688
NCBI-ProteinID:
XP_034517725
Ensembl:
ENSAMEG00000010433
LinkDB
All DBs
Position
6:complement(397047..553438)
Genome browser
AA seq
380 aa
AA seq
DB search
MLLSIGMLMLSATQVYTILTVQLFAFLNLLPVEADILAYNFENASQTFDDLPARFGYRLP
AEGLKGFLINSKPENACEPIVPPPLKDNSSGTFIVLIRRLDCNFDVKVLNAQRAGYKAAI
VHNVDSDDLISMGSNDIDNVRIELSSVFQGKGTASKCKDYFLFSSRGHIILVPEFSLPLE
YYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVCA
ICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQE
ENEVSEHTPLLRPLASVSTQSFGALSESRSHQNMTESSDYEEEDNEDTDSSDAENEINAH
SVVVQLQPNGERDYNIANTV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctccatagggatgctcatgctgtcggctacacaagtctataccatcttgact
gtccagctctttgcattcttaaacctactacctgtagaagcagacattttagcatataat
tttgaaaatgcatctcagacatttgatgaccttccagcaagatttggttatagacttcca
gctgaaggtttaaagggttttttgattaattcaaaaccagagaatgcctgtgaacccata
gtgcctccaccactaaaagacaattcatctggcactttcatcgtgttaattagaagactt
gattgtaattttgatgtaaaggttttaaatgcacagagagcaggatacaaagcagccata
gttcacaatgttgactctgatgacctcattagcatgggatccaacgacatagataatgtc
agaattgagttgagttcggtgttccaaggaaagggaacagcaagcaaatgcaaagactac
tttttgttttcttctaggggccacattatcttagttcctgaatttagtcttcctctggaa
tactatttaatccccttccttatcatagtgggcatctgtctcatcttgatagtcattttc
atgatcacaaaattcgtccaggacagacatagagctagaagaaacagacttcgtaaagat
cagcttaagaaactccctgtacataaattcaaaaaaggagatgagtatgatgtatgtgcc
atttgtttggatgaatatgaagatggagacaagctcagaatccttccttgttcccatgct
taccactgcaagtgtgtagacccctggctaactaaaaccaaaaaaacctgtcccgtctgc
aagcaaaaagttgttccttctcaaggcgattcagactctgacacagacagtagtcaagaa
gaaaatgaagtgtcagaacatacccctttacttaggcctttggcttcggtcagcacccag
tcatttggggctttgtcggaatcccgctcacatcagaacatgacagaatcttcagactat
gaagaagaggacaatgaagataccgacagtagtgacgcagaaaacgaaattaacgcacac
agtgttgtagtccagctgcagcctaatggtgaaagggattacaacatagcaaatactgtc
tga
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integrated database retrieval system
