KEGG   Ailuropoda melanoleuca (giant panda): 100481753
Entry
100481753         CDS       T01329                                 
Symbol
WDR7
Name
(RefSeq) WD repeat-containing protein 7 isoform X2
  KO
K24738  rabconnectin-3b
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:aml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    100481753 (WDR7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aml04131]
    100481753 (WDR7)
Membrane trafficking [BR:aml04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    100481753 (WDR7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta CFAP251_N Beta-prop_EML WDR55 EIF3I ASA1 ANAPC4_WD40 Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_ACSF4 Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_HPS5 PAC11 Beta-prop_SCAP Beta-prop_WDR19_1st NBCH_WD40 PEP5_VPS11_N WDR90_beta-prop_4th WDR72_alpha-sol Beta-prop_Vps41 Ge1_WD40 Tricorn_2nd PD40 Beta-prop_DCAF4 Arminin LRS4
Other DBs
NCBI-GeneID: 100481753
NCBI-ProteinID: XP_011224568
Ensembl: ENSAMEG00000014743
LinkDB
Position
14:88155983..88495078
AA seq 1454 aa
MAGNSLVLPIVLWGRKAPTHCISAVLLTDDGTTIVTGCHDGQICLWDLSVELEVNPRALL
FGHTASITCLSKACASSDKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFS
VGNQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAL
SVTGILKVWIVTSEISGMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASDSFRSDV
GKAVENLIPPVQHSLLDRADKELLICPPVTRFFCGFKEHLHKLLIQGDSSGRLNIWNISD
TPDKQEELKMTTSISLQEAFDKLNPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGRLVC
GREDGSIIIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARYDQR
YLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDHSVG
LLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMGITA
VEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEASDK
GNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENLQKA
SGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEEEDEEMMRQRREESDPEYRAS
KSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSRGGH
MSLMLPGYNQPARKLSHGKAEVGRKLPATESVGKGTYGVSRAVTTQHLLSIISLANTLMS
MTNATFIGDHMKKGPTRPPRPSTPDFSKARGSPPTSSNVVQGQIKQGWSQLAAMHCVMLP
DLLGLDKFRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIEQAGRKEAIDAWAPYLPQ
YMDHVISPGVSAEAMQTISAAPDALGPEAKVQEEEHDLADDDITTGCLSSIPQMKKISTS
YEERRKQATAIVLLGVIGAEFGAEIEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTC
KALTFLLLQPPSPKLPPHSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQL
ANITMGLPLSPAADSARSARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQNMHT
TTLARAKGEILRVIEILIEKMPTDVVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRF
YMVSYYERNHRIAVGARHGSVALYDIRTGKCQTIHGHKGPITAVAFAPDGRYLATYSNTD
SHISFWQMNTSLLGSIGMLNSAPQLRCIKTYQVPPVQPASPGSHNALRLARLIWTSNRNV
ILMAHDGKEHRFMV
NT seq 4365 nt   +upstreamnt  +downstreamnt
atggcgggaaacagccttgtcctacccattgttctttggggtcgcaaagcaccaacacat
tgcatctcagcagtacttttaacagacgatgggaccacaattgtaactggatgccatgat
ggacaaatatgtctctgggatctttcagtagaattagaagttaatcctcgagcactgttg
tttggtcacacagcctcaatcacctgtttgtctaaagcttgtgcttctagtgacaaacag
tatattgtgagtgcatctgaaagtggagaaatgtgtctctgggacgtgaatgatggcaga
tgtattgagtttacaaaattagcctgcacacatacaggcatacagttctaccagttttct
gttggaaatcagagagaaggaaggcttttatgccatggccactatcctgaaatcctcgtt
gtggatgccaccagccttgaggtgttatactccttagtatcaaagatctctccagactgg
attagctccatgagtattatccgatcccaccgaacacaagaggacactgtggtcgcactc
tcagtgacgggcatcttgaaggtgtggattgttacctctgaaataagtggcatgcaggat
actgagccaatatttgaggaggaatccaaaccgatttattgtcagaattgccaaagcatt
tctttttgtgcattcacacaaaggtcacttttggttgtgtgctccaaatattggagggtg
tttgatgctggagactattccttgctgtgttcaggtcctagtgaaaatggacagacgtgg
actggaggtgactttgtatcagcagataaagtaatcatttggactgaaaatgggcaaagt
tatatttacaaactacctgccagttgccttccagctagtgattcattccgcagtgatgtg
gggaaagcagttgaaaatttaattcctcctgtacaacatagcctcttggatcgagcagat
aaagagttgctaatttgtcctcctgttactcggttcttttgtggattcaaagaacacctc
cataaactattaattcaaggtgattcttcaggaagattgaatatttggaacatatcagac
acacctgataaacaggaagaattgaaaatgacaacttctattagtttgcaagaggcattt
gataaactgaatccttgtcctgctggaattatagatcagctgagtgtcattcccaatagt
aatgagcctcttaaagtcactgcaagtgtgtacataccagcacatggacgactcgtttgt
ggccgtgaggatggaagcatcattattgtacctgccacacagacagccatagtacagctg
ctgcaaggggaacacatgctccgaagaggttggccacctcacagaacactccgcggtcat
cggaacaaagtcacatgtttgctatatcctcatcaggtctcagctcgttatgaccaaaga
tatctgatatctggcggcgtggatttttcagtcataatttgggacatattttctggagaa
atgaaacatatcttctgtgtgcatggtggggagattactcagcttctagttccacctgaa
aactgtagtgcaagggtgcagcactgtatctgctctgtagccagtgaccactcagtgggg
cttctaagtctgcgagagaagaaatgcattatgctggcatctcggcatctcttccccatt
caggtcatcaagtggaggccttctgacgactacctagtagtgggatgttcagatggctct
gtatatgtctggcaaatggatactggcgcgttggatcgctgcgtgatggggatcacagca
gtggagatactgaatgcctgcgatgaagcggttcccgctgcagttgactctctcagtcat
ccggcagtcaacctaaaacaggccatgacccggcgtagtctggccgcgcttaaaaacatg
gcccatcataagctacagactcttgcaactaacctcctggcttctgaggcctctgacaaa
gggaatttgcctaaatattctcataactccctgatggtccaagcaataaagacaaaccta
acagacccggacatacatgtgcttttctttgatgtggaagcgttgattattcaactcctg
actgaagaagcctctaggccgaatactgcgcttatttccccagagaatttgcaaaaagca
tctggcagttcagacaaagggggctcttttctaactggaaaacgagcagcagttctcttc
caacaagtgaaagaaactatcaaagagaacataaaggaacatctccttgatgatgaagag
gaggatgaggagatgatgaggcagagaagagaagagagtgatccagagtatcgggccagc
aagtctaaaccgttgaccttattggaatataatttaacgatggacactgcaaaattgttc
atgtcgtgtcttcatgcctggggtttaaatgaagttctggatgaagtttgtcttgatcgc
cttggaatgctgaaaccgcattgcacagtatcttttggtctcctatcgagaggaggtcat
atgtccctgatgcttcctggttataatcagcctgctcggaaactgtcacatgggaaagca
gaagtaggaaggaagctgccagcaaccgagagcgtcggaaagggcacttacggagtgtcc
cgagccgtcaccacacagcatctcctgtctatcatatctttggcaaatacgttaatgagt
atgaccaatgcaacttttattggtgatcacatgaagaagggtcctaccaggccacctcga
ccaagcaccccagacttttctaaggcaaggggttcccctccaacttccagtaatgttgtg
caaggacagattaaacaaggatggagtcagttggctgctatgcattgtgtgatgctgcca
gacctgctgggattggataaatttagacctccacttctagagatgctggctcggagatgg
caagatcgatgcttggaggtcagagaagctgctcaggccctgcttctagctgaactgcga
agaattgagcaggcagggcggaaggaagccatcgatgcctgggccccttatttacctcag
tatatggaccacgtcatatcacctggagtctcagcagaagccatgcagacgatcagcgct
gctcctgatgccttggggccagaagccaaggtccaggaggaagagcacgaccttgcagat
gatgacatcacaactggttgcttgtcaagtatcccacaaatgaaaaagatttccacatct
tatgaggaaagacggaagcaagctactgccattgttttactaggagtaataggagctgaa
tttggtgctgaaattgaacctcctaaattattgaccagacctcgaagctcaagtcaaatt
cctgagggatttggcttgactagtggtggatccaactactcactggccagacatacttgt
aaggcactgacatttcttctgctgcagcccccgagccctaaacttcctccacacagtaca
atccgaagaacagccattgatctcattggacgtggtttcacagtctgggagccttacatg
gacgtgtctgcggtcctcatggggcttctcgaactctgtgctgatgctgagaaacagctt
gccaacatcacaatggggctgcctcttagccctgcagctgactccgcccgctctgcaagg
catgccctctcgctcattgccactgccagaccacccgccttcatcacaactatagccaaa
gaggttcacagacatacagctcttgcagcaaatacccagtcgcaacagaacatgcacacg
acaactcttgcacgagctaaaggggaaattctgagagtcatcgagattcttattgaaaag
atgcccacagatgttgtggaccttcttgtggaggttatggacatcattatgtactgcctt
gaaggatctttagttaagaagaaaggtcttcaagaatgtttcccagccatctgcaggttc
tacatggtcagctattatgagcggaatcacagaatagccgttggagctcgccatggttca
gtggccctgtacgacatccggactggaaaatgtcagacaatccatggacacaagggacca
atcactgcagtggcctttgctcctgatggacggtatcttgccacctactcaaatacagac
agccacatttctttctggcagatgaacacgtcactgctggggagcattggcatgctgaat
tcggcgccccagctgcgctgcatcaagacgtaccaggtgccccccgtgcagccggcctcg
cccggctcccacaacgcgctccgactggcccggctcatctggacttccaaccgcaacgtc
atcctcatggcccacgatgggaaggagcaccgcttcatggtctag

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