Ailuropoda melanoleuca (giant panda): 100481766
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Entry
100481766 CDS
T01329
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100481766 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aml04147
]
100481766 (COPB1)
Membrane trafficking [BR:
aml04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100481766 (COPB1)
Exosome [BR:
aml04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100481766 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
100481766
NCBI-ProteinID:
XP_002923349
Ensembl:
ENSAMEG00000002370
UniProt:
G1L6M9
LinkDB
All DBs
Position
16:complement(47797464..47834904)
Genome browser
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADV
LEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEITVGPVQKLVTEMGTYATQSALSSSRPTKKEEERP
PLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNIIDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIQQGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKTSI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgccgagaacgtgtgctatacgttaattaacgtgcccatggattcagaacca
ccatctgaaattagcttaaaaaatgatctagaaaaaggagatgtgaagtcaaagactgaa
gctttgaagaaagtaatcattatgattctgaatggtgaaaagcttcctggacttctaatg
accatcattcgttttgtgctacctcttcaggatcataccatcaaaaaattacttctggta
ttttgggaaattgttcctaaaacaactccagatgggagacttttacatgaaatgatcctt
gtatgtgatgcatatagaaaggatcttcagcatcctaatgaattcattcgagggtccact
cttcgttttctttgcaaattgaaagaagcagaattgctagaacctttaatgccagctatc
cgtgcttgtttggagcaccgacacagctatgttagaagaaatgctgttttggccatctat
acaatctacaggaattttgaacatcttatacctgatgctcctgaactgatacatgatttt
ctggtgaatgagaaggatgcaagttgcaaaaggaatgcatttatgatgctcattcatgca
gatcaggatcgagctttggattacctaagtacttgcattgatcaagttcaaacatttgga
gacattcttcaattggttattgttgaactaatttataaggtctgtcatgctaatccatca
gaaagggctcgtttcattcgctgcatctataacttattacagtcatctagcccagctgta
aaatatgaagctgccggaacattagtgaccctctccagtgcacctactgcaatcaaggct
gctgctcagtgttacattgatttaattattaaggagagtgacaacaatgtcaagctcata
gtactggatcgattgatagaattaaaagagcatcccgctcatgaacgagtactacaggat
ctggttatggacatcctgagagtattgagcacgccggacttagaagtacgcaagaagacc
ctgcagttagcactggatctcgtctcttctaggaatgttgaagagttggttattgttctg
aagaaggaagtgattaaaacaaataatgtgtcggagcatgaagatactgacaaatacaga
caactccttgtgagaacattgcattcctgttctgtccgatttccagatatggctgcaaac
gttattcctgtgttaatggaatttctcagtgacagtaatgaagcagcagctgctgatgtc
ttggagtttgttcgtgaagccattcagcgctttgataacctgagaatgcttattgttgag
aagatgcttgaagtctttcatgctatcaaatctgtcaagatttaccgaggagcattatgg
atcctgggagaatactgtagtaccaaggaagacattcagagtgtgatgacagaggtccgc
aggtcccttggggagatcccaattgtagagtcagaaataaagaaagaagctggcgaatta
aaacctgaggaagaaataactgtggggccagttcagaagttggtaactgagatgggcacc
tatgcaactcagagtgcccttagcagttctcgacccacaaagaaagaggaagaaagacct
cccctgagaggcttccttctggatggagatttctttgttgctgcctcccttgccacaact
ctgaccaagattgccttgcgctacgtcgctttggttcaggagaagaaaaagcaaaattct
tttgttgctgaggctatgttgctcatggccactatccttcatttgggaaaatcctctctt
cctaagaagccaattacagatgatgatgtagatcgaatttccctgtgcctcaaggtcttg
tctgaatgttcacctttaatgaatgacattttcaataaggaatgcagacagtccctttct
cacatgttgtctgctaaacttgaagaagagaaattatcccagaagaaagaatctgaaaag
aggaatgtgacagtacagcctgatgaccccatttcctttatgcaactaactgcgaagaat
gaaatgaactgcaaggaagatcagtttcagctgagcttgctggcagcgatgggcaacaca
cagaggaaagaggcagcagatcccttggcatctaaacttaacaaggtcacccagttgaca
ggtttctcagatcctgtatatgcagaagcttatgttcatgtcaaccagtatgatattgtc
ctggatgtacttgttgtaaatcaaaccagtgatactttgcagaactgcacattagagtta
gctactctgggggatctgaaacttgtggaaaagccatctcctttgactcttgctcctcat
gattttgcaaatattaaagctaatgttaaagtagcatcaacagaaaatggaataattttt
ggtaatatagtttatgatgtctctggagcagcaagtgacagaaattgtgtcgtcctcagt
gatattcacatcgacatcatggactatatccagcctgccacttgcactgacgctgaattc
cgtcagatgtgggctgaattcgaatgggaaaacaaagtgacggttaacacaaatataatt
gatttaaatgactacttacagcatatattaaagtcaactaacatgaaatgcctcactcca
gagaaggctctttctggttactgtggctttatggcagccaacctgtatgctcgttctata
tttggagaagatgcccttgcaaatgtcagcattgagaagccaattcaacagggaccagaa
gcccctgttactggccacataagaattcgtgcaaagagtcagggaatggccttaagtctt
ggagataaaatcaacttgtctcagaagaaaactagtatataa
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