Ailuropoda melanoleuca (giant panda): 100481788
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Entry
100481788 CDS
T01329
Symbol
SHH
Name
(RefSeq) LOW QUALITY PROTEIN: sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04340
Hedgehog signaling pathway
aml04360
Axon guidance
aml05200
Pathways in cancer
aml05205
Proteoglycans in cancer
aml05217
Basal cell carcinoma
aml05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100481788 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100481788 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100481788 (SHH)
05205 Proteoglycans in cancer
100481788 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
100481788 (SHH)
05217 Basal cell carcinoma
100481788 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aml01002
]
100481788 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aml00536
]
100481788 (SHH)
Peptidases and inhibitors [BR:
aml01002
]
Cysteine peptidases
Family C46: hedgehog family
100481788 (SHH)
Glycosaminoglycan binding proteins [BR:
aml00536
]
Heparan sulfate / Heparin
Morphogens
100481788 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
100481788
NCBI-ProteinID:
XP_034505932
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All DBs
Position
1:complement(210074203..210086927)
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AA seq
372 aa
AA seq
DB search
MLQLARCLVLLLVSALLMCPGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPGV
KLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLAADDQGRLLYSDFLA
FLDRDDGAKKVFYVIETREPRERLLLTAAHLLFVAPHNDSAAAEREAPSGAGPPPGGAPG
RRVVAAPSHFSPPARFHGCSPFPTFTVDGVKSLCKVSVQXLLPASLVTKCVSTPVKSCIT
MYLKLFSLCSIV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagctggcgagatgtctggtgctgcttctcgtctccgcactgctgatgtgcccg
gggctggcgtgcggacccggcaggggatttgggaagaggcggcaccccaaaaagctgacc
cctttagcctacaagcagtttatccccaacgtggctgagaagaccctaggggccagtgga
agatatgaagggaagatctcgagaaactccgagcgatttaaggaactcacccccaattac
aaccccgacatcatatttaaggatgaagaaaacacgggagcagaccggctgatgactcag
aggtgtaaggacaagctgaacgccttggccatctcggtgatgaaccagtggcccggcgtg
aagctgcgggtgaccgagggctgggacgaagacggccaccactcagaggagtcgctgcac
tacgagggccgtgcagtggacatcaccacgtcagaccgcgaccgaagcaagtacggcatg
ctggcgcgcctggccgtggaggctggcttcgactgggtgtactacgagtccaaagcgcac
atccactgctccgtgaaagcagagaattcggtggcggccaaatccggcggctgcttcccg
ggctcggccacggtgcacctggagcagggcggcaccaagctggtgaaagacctgcgcccc
ggggaccgcgtgctggcggccgatgaccagggccgactgctctacagcgacttcctcgcc
ttcctggaccgcgacgatggtgccaagaaggtcttctacgtgatcgagacgcgggagccg
cgcgaacgcttgctgctcaccgccgcgcacctgctcttcgtcgcgccgcacaacgactcg
gcggccgcggagcgggaggcgccgtcgggcgcggggccgccgccggggggcgcgccgggg
cgccgcgtggtggcagcaccctcccacttctccccgcctgcccggttccacggctgcagc
ccctttcccacctttacggtggacggtgtgaagagcttgtgcaaagtgtccgtgcagntg
ttgctgccagcctccctcgtgactaaatgcgtatctactcctgtcaaaagctgtatcaca
atgtacttgaaactgttctctttgtgctctattgtttga
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