Ailuropoda melanoleuca (giant panda): 100481878
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Entry
100481878 CDS
T01329
Symbol
FREM2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100481878 (FREM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
aml04091
]
100481878 (FREM2)
Lectins [BR:
aml04091
]
C-Type lectins
Lecticans
100481878 (FREM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
100481878
NCBI-ProteinID:
XP_034520977
Ensembl:
ENSAMEG00000016273
LinkDB
All DBs
Position
7:78204270..78369130
Genome browser
AA seq
3299 aa
AA seq
DB search
MHAARTPGIASRGGGVANPSSFPPIPTLPPRLVLLLLLLLSPVSCVPAQPAAPGRALLSP
DLAGAAGVPAEEAIVLANRGLRVPFGREVWLDPLHDLVLQVQPGDRCAVTVLDNDALAQR
PGRLSPKRFPCDFGPGEVRYSHLGARSPSRDRIRLQLRYDAPGGAAVLPLVLEVEVVFTQ
LEIVTRNLPLVVEELLGTSNALDARSLEFAYQPETEECRVGILSGLSALPRYGELLHYPQ
VPGAASEGGAQEPLLMDCKAFQELGVRYRHRAPSRSPNRDWVPMVVELRSRGSPVGSPAR
KREHFQVLVRIRGGAENTAPKPSFVAMMMMEVDQFVLTALTPDMLAAEDAESPPDLLIFN
LTSPFQPGQGYLVSTDDRSLPLSSFTQRDLWLLKIAYQPPSEDSDQERLFELELEVVDPE
GAASDPFAFMVVVKPMNTLAPVVTRNTGLILYEGQSRPLTGPAGSGPQNLVISDEDDLET
VQLEVVAGLRHGHLVLLGATDGSAAPKTFTVADLEAGQVVYHHDDRDGSLSDNLVLRMVD
GGRRHQVQFLFPITLVPVDDQPPVLNANTGLTLAEGETVAILPLALSATDMDSDDSLLLF
VLESPSSTVGHLLLRQTHPPHEEEELSRGPWRRQGTFYEQTVTEWRQRDITEGRLFYRHS
GPHSPGPVMDQFTFRVQDNHDPPNQSGPHRFVIRIHPVDRLPPELGSGCPLRMVVQESQL
TPLRKKWLHYTDLDTDDRELRYTVTQPPMDTDENHSPAPLGTLVLTDSPSVVVAHFTQAQ
INHHKIAYRPPEQELGVAARVAQFQFQVEDQAGNVAPGTFTLYLQPVDNQPPEILNTGFS
IQEKGHHILSETELRVNDVDTDVTHISFTLTQAPKHGHMRVSGQILHVGEVFHLEDIKQG
RISYAHNGDASLTDSCSLEVSDRHHVVPITLRVNVRPADDVPMLSLPAGTLGSYLDVLEN
GATEITASVIKGTYEDTDDLMLTFILEDPPLYGEILVNGVPAEQFTQRDILEGSVVYAHT
SGEIGLLPRGDSFNLSLSDMSQEWVIGGNTIQGVTVWVTILPVDNQAPEISVGEQFMVME
GDKSVITATHMSAEDIDSLTDDILCTIVIQPTSGYVENISPAPGSEKSRAGIAISAFTLK
DLRLSHINYVQSVHKGVEPVEDRFIFRCSDGINFSERHFFPIVIIPTNDEQPEIFMREFM
VMEGMSLVIDTPILNAADADIPPDDLTFTITQFPTRGHIMNQLINGTVLVESFTLDQIIE
SSSIIYEHDDSETQEDSFVIRLTDGKHSVERMVLIIVIPVDDETPRMMINNGLEIEIGET
KIINNKILMATDLDSEDKSLVYIIRYGPGHGLLQRRKPTGALENITLGMNFTQDEVDRNL
IQYVHFGQEGIRDLIKFDVTDGINALIDRYFYVSIGSIDIVFPDVISKGVSLKEGGKVTL
TTDLLSTSDLNSPDENLVFTITRAPMRGHLECTDQLGTSITSFTQLQLAGNKIYYIHTAD
DEVKMDSFEFQVTDGRNPVFRTFRISISDVDNKKPVVTIHNLVVSEGENKLITPFELTVE
DRDTPDKLLKFIVTQVPVHGQLLFNNTRPAMVFTKQDLNENLISYRHDGTESSEDSFSFT
VTDGFHTEFYVFPDTIFETRRPQVMKIQVLAVDDSVPQIAVNKGASTLRTLATGHLGFMI
TSKILKAEDRDSLRFSLRFIVTEAPQHGYLLNLDRGNHSVTQFTQADIDDMKICYVLKDG
ANATSDVFHFTVEDGGGNKLTKQHFRLNWAWISFEKEYYLINEDSKFLDVILKRRGYLGE
TSFISIGTRDGTAEKDKDFKGKAQKQVQFNPGQTRATWRVRIMSDGEHEQSETFQVVLSE
PVLAALEFPAVTTVEIVDPGDESTVFIPQSEYSIEEDVGELFIPIRRSGDVSQELMVVCY
TQQGTAGGTVPTSVLSYSDYISRPEDHTSVIRFDKDEREKMCRIIVIDDSLYEEEETFHV
LLSMPMGGRIGSEFPGAQVKIVPDKDDESTVFIPQSEYSIEEDVGELFIPIRRSGDVSQE
LMVVCYTQQGTAGGTVPTSVLSYSDYISRPEDHTSVIRFDKDEREKMCRIIVIDDSLYEE
EETFHVLLSMPMGGRIGSEFPGAQVKIVPDKDDEPVFYFGEVEYPVDESAGYVEVRVWRT
GTDLSRSSSVTVRSRKTDPPSADAGTDYVGISRNLDFAPGVNMQTVRVIVLDDLGQPMLE
GIEKFELVLRMPMNAALGEPSKATVSINDSVSDLPKMQFKERIYTGNEDDKQIVAMIHRT
GDVHYRSSVRCYTRQGSAQVMTDFEERPNTDSSVITFLPGETEKPCVLELMDDKLYEEVE
ELRLVLGTPQSNSPFGAAVGEQNETLIRIQDDADKTVIKFGETKFNIREPKEPGQSVVVK
IPVIRQGDTSKVSIVRVHTKDGSATSGEDYHPVSEEIEFKEGETQHIVNIEVIFDGIREM
REAFTVHLKPDENMVAETQVTKAIVYIEEMNSMADVTFPSVPQIVSLLMYDDTSRAKDSA
GPVSGYPVVCITACNPKYPDYDKTGSICASENINDTLTRYRWLISAPAGPDGVTSPMREV
DFDTFFTSSKMITLDSIYFQPGSRVQCAARAVNANGNEGLELMSPIVTIGREEGLCQPRV
PGTVGAEPFSAKLRYTGPEDPDYTNLIKLTVTMPHIDGMLPVISTKELSNFELTLSPDGS
RVGNHQCSNLLDYTEVKTHHGFLTDATKNPEVIGETHPYQYSSSIRGSSTLRFYRNLNLE
ACLWEFVSYYDMSELLTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGVGGWQH
FDLKSELRLTFVYDTAILWNDGIGSPPEAELQGSLYPTSMRIGEEGRLVVNFKTEAQFHG
LFVLSHPASFTSSMIMSADHPGLTFSLRLIRSEPTYNQPVQQWSFVSDFAVRDYSGTYTV
KLLPCTTPSNQEYRLPVTCNPREPVTFDLDIRFQQVSDPVAAEFSLNTQMYLLSRKSLWL
SDGSAGFGQESDVTFAEGDIIYGRVMVDPVQNLGDSFYCSIEKVFLCTGADGYVPKYSPT
NAEYGCLADSPSLLYRFKIVDKAQPETQATSFGNVLFNAQLAADDPEAILLVNQPGSDGF
KVDSTPLFQVALGREWYIHTIYTVRSKDNANRGIGKRSTEYQHHSLVSAGKPQAVNQARK
RREVRSPPPLAWEIGADNNRGTNIQHIALDRTHRKQVPQGRVPPDGVLPRELNRPSSEVS
LVTVVGGVAVALLTVCLAAITAMLCRSQKGTRRKGALKGSGSSKPMMPPQSHHSDSSEV
NT seq
9900 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcggccaggacccccgggatcgcctcccgcggcggcggggtggccaaccccagc
agttttccgccgatacccacgctgccgccccgcctggtgttgctgctgctgcttctcctg
tcaccggtaagctgcgtcccggcacagcccgctgcccccggccgggcgttgctgtccccg
gatctcgcgggggctgcaggggtccccgccgaggaggccatagtgctggcgaaccgtggg
ctccgggtgcccttcggccgcgaggtctggctggatccgctgcatgacctggtgctgcag
gtgcaaccaggggaccgctgcgcggtgaccgtgctcgataacgacgcgctggcccagagg
cctggccgcctgagtcccaagcgcttcccctgcgacttcggcccgggagaggtgcgctac
tcgcacctgggcgcgcggagcccctcgcgggatcgcattcggctgcagctgcgctacgac
gcgccgggaggggcagcagtgctacccttagtgctggaggtggaggtggtcttcacccag
ctggagattgtgactcggaacttgcccctagtcgtggaggagctgctggggaccagcaat
gccctggacgcgcggagcctggagttcgcctaccagcccgagaccgaggagtgtcgcgtg
ggcatcctgtccggcttgagcgcgctgcctcgctacggggaactccttcactacccgcag
gttccaggtgcagccagcgaggggggcgcccaggagcctctcctgatggactgcaaagct
ttccaagagctaggcgtgcgctaccgccacagggcccccagtcggtcaccaaacagggac
tgggtgcccatggtggtggagctgcgctctcgaggttcgcctgtgggcagtccggctcgg
aaacgtgagcacttccaggtgctggtgagaatccgaggaggcgctgagaacactgcaccc
aagcccagttttgtggccatgatgatgatggaggtggatcagtttgtcctcacagccctg
accccagacatgctggccgcggaggatgctgagtccccccctgacctgttgatcttcaac
ctcacctctcccttccagcctggccagggctacctagtaagtactgatgatcgcagcctg
cccctctcctccttcactcagagggatctgtggctcttgaagattgcctaccagcccccc
tctgaggactctgaccaggagcgtctctttgaactggagttggaggtagtggacccggaa
ggagctgcctcagacccttttgcttttatggtggtggtgaagcccatgaacacactggct
ccagtggtcacccggaacactggtctcattctctatgagggccagtctcggccccttaca
ggccctgcaggcagtggaccacaaaacctggtcatcagcgatgaggatgatctggagaca
gtacagctggaggtggtggctgggctccggcatggtcaccttgttcttctgggtgccacc
gatggcagtgctgcccctaagacctttacggtggctgatctagaggccggccaggtggtc
taccatcacgatgacagagatggctcgctgagtgacaaccttgtccttcgaatggtggac
ggaggacgcaggcaccaggtgcagttcctgttccccatcaccttagtacctgtggatgac
cagccaccagtcctcaatgctaacacggggctgacactggcagaaggtgaaacagtggcc
atcctgccgcttgctctaagtgcaactgacatggactcagatgactctctgctgcttttt
gtgctggagtcgccctcctcaaccgtagggcatctgcttctccgccaaactcatcctccc
catgaagaggaagagcttagcaggggcccttggaggaggcagggaacattctatgagcaa
acagtgacagagtggcgacagcgggacataaccgagggaaggctgttctacaggcactcc
gggccccatagccccgggccggtgatggaccagttcacgtttcgagtccaggataaccat
gacccccctaatcagtcgggaccacacaggtttgtgatacgcattcatcctgtggatcgc
ctccctccagagctgggcagcggctgtccccttcggatggtggtgcaggagtcccagctc
accccactgaggaagaagtggctgcactacactgacctggacacagatgaccgagaactg
cggtacacagtgacccagccccccatggacacagatgaaaaccactcgccagccccactg
ggcaccttggtcctgaccgacagcccctcagtcgtggtggcccattttacccaagcccag
atcaaccaccataaaatagcttacagacctccagagcaagaactgggagtggctgcccga
gtggcccagttccagttccaggtggaggatcaagctgggaatgtggctccgggtaccttc
accctttacttgcagcccgtggacaaccaaccacccgagatcctcaacacgggtttcagc
attcaggagaagggccaccacatcctgagtgagacggagttgcgtgtgaatgatgtagac
actgacgtcacgcacatctctttcactctcacgcaggcgcccaaacatggccacatgaga
gtgtctggacagatactgcacgtaggggaggtcttccacttggaagacataaagcagggt
cggatttcctatgcgcataacggggatgcgtctctcactgatagctgctccttggaggtc
agcgacagacaccacgtggtgcccatcactctcagagtgaatgtccggccagcggatgat
gtgcccatgctgagccttcccgctggcactctggggtcatatctagatgttctagaaaat
ggagctaccgaaatcactgccagtgttatcaaggggacttatgaagacaccgatgatttg
atgttgactttcatcttggaagatccccccttatacggagaaatcctggtcaacggagtt
ccagcagagcagtttacccaaagggacatcttagagggctctgtcgtctatgcccacact
agtggtgagattggcctgttgcctagaggggactcttttaacctgagtctgtcagatatg
tctcaagaatgggtaataggtggcaatactatccaaggagttactgtatgggtgaccatt
ctccctgttgataatcaggcaccagaaatttctgtgggtgaacagtttatggtcatggaa
ggtgataaaagtgttataaccgcaacacatatgagtgccgaagatatcgattcactaact
gatgacatcttgtgcaccatagttattcagcctacctccggttatgttgaaaacatttct
ccggctccaggctctgagaaatcaagagcaggaattgccataagtgcctttaccctgaaa
gacctcaggctgagtcatattaactatgtccagagtgtccataaaggggtcgaacctgtg
gaagaccgatttatatttcgttgctctgatggcattaacttctcagagagacattttttc
cccattgtcatcattcccaccaatgatgaacagccagaaatatttatgagagaatttatg
gtgatggaaggcatgagtctggtgatcgatacgcccatcctcaatgccgctgatgctgac
attcccccggatgatctaactttcaccattacccagttccctactcgcggtcacatcatg
aaccagctgataaatggcacagttttggttgaaagcttcaccttggaccagatcatagag
agttcaagcattatttatgagcatgatgactctgagacccaggaagacagttttgtgatt
agactaacagatggtaaacactcagtggaaagaatggtccttattatcgttatccctgtt
gatgatgagacccccagaatgatgatcaataatggcctagaaatagaaattggggaaacc
aaaattatcaacaacaaaatattaatggcaactgatttagactctgaagacaaatctttg
gtttatattattcgttatgggccaggacatggcttattgcagagacgaaaacctacaggt
gccttggagaatatcacactgggcatgaattttacccaggatgaagtggatagaaactta
attcagtatgtccattttggacaagagggcattcgggacctaattaaatttgatgtgact
gatggaataaatgccctcatcgatcgctacttttatgtgtccattgggagcattgacatc
gtcttcccggatgtgataagcaagggagtatccttgaaagaaggtggcaaagtcaccctc
acaacagacttgctaagcaccagtgacttgaacagtcctgatgaaaacttagtttttacc
atcaccagggctcccatgagagggcacttagagtgcacagatcaacttggaacgtccatc
acgtctttcactcagctccagctggctggcaacaaaatctactacatccacacagctgac
gatgaggtcaagatggacagttttgagtttcaagtcaccgatggacgtaaccccgtcttc
cggacattccgtatctccattagtgatgtggataacaaaaagccagtggtcaccatccat
aacctggttgtcagtgagggtgaaaacaagttgatcactccctttgaactcactgtggaa
gacagagacactcctgacaaactcctgaagttcattgtcacccaggtgcctgttcatggt
caactcctattcaacaacaccagacctgccatggtttttaccaagcaagacttgaatgaa
aacttaatcagctacagacatgatggcactgagtcgagcgaagacagcttctccttcacg
gtgactgatggtttccatacagagttctatgttttccctgatacaatatttgaaaccagg
agaccccaggtgatgaaaatccaggtcttagccgtggatgatagtgtcccccaaattgct
gtgaacaaaggggcctccacgcttcgcactctggctaccggtcacttggggttcatgatc
acaagcaaaatattgaaagcggaggacagagacagcttacgtttttctctcaggtttatt
gtaacagaggcccctcaacatggatatctcctcaacctggacagaggcaaccacagtgtg
actcagtttacacaagctgacattgatgacatgaaaatatgctacgttttaaaagacggg
gccaatgccacaagtgatgtgttccattttacagttgaagatggtggtgggaacaaatta
accaagcagcattttcgtctgaattgggcatggatctcctttgaaaaggaatattacctc
atcaatgaagactccaaatttctagatgtcattcttaaacgtagaggttacttgggagag
acttcatttataagtattggcacaagagatgggactgcagaaaaagacaaagacttcaag
ggcaaagcacagaaacaagtgcagttcaacccaggccagaccagggccacctggagagtg
cggatcatgagcgatggggagcatgagcagtcggagaccttccaggtggttctctcagag
cctgtgctggctgctctggaattccctgcagtgaccacggtggagattgttgacccagga
gatgagtccactgtatttattccccagtctgaatactccattgaagaagatgtcggtgag
ctgttcattcccatcaggagaagtggagacgtgagccaggagttgatggtggtctgttac
acacaacaaggcacggcaggcggaactgtgcccacatcagtgctgtcctattcagattac
atatccaggcccgaggaccacaccagcgtcatccgttttgacaaagatgagcgtgagaaa
atgtgtcgcatcattgttattgacgactccttgtatgaagaggaggaaacattccatgtt
cttctgagcatgcccatgggtgggcggattggatcggagttcccaggggctcaggttaag
atcgtccctgacaaagacgatgagtccactgtatttattccccagtctgaatactccatt
gaagaagatgtcggtgagctgttcattcccatcaggagaagtggagacgtgagccaggag
ttgatggtggtctgttacacacaacaaggcacggcaggcggaactgtgcccacatcagtg
ctgtcctattcagattacatatccaggcccgaggaccacaccagcgtcatccgttttgac
aaagatgagcgtgagaaaatgtgtcgcatcattgttattgacgactccttgtatgaagag
gaggaaacattccatgttcttctgagcatgcccatgggtgggcggattggatcggagttc
ccaggggctcaggttaagatcgtccctgacaaagacgatgaacctgtcttctacttcggc
gaggtcgagtaccctgtggacgagagcgccggctacgtggaggtgcgggtgtggagaaca
ggcaccgacctgtccaggtcctccagtgtcaccgtgagatcgaggaaaacggatcctccc
tctgctgacgctggaacggactatgtgggaatcagtcggaatttagattttgctcctgga
gtcaacatgcagactgttcgtgttatcgtcctggatgaccttgggcaaccgatgctggag
ggaattgagaaatttgaactggtgcttcgtatgcctatgaatgctgccctcggcgagccc
agcaaagccacagtgtccataaatgattctgtctccgatttgcctaagatgcagttcaaa
gagcgcatatatactggcaatgaagacgacaagcagatagttgcaatgatccacaggact
ggagacgttcactacaggtcttcagtgagatgctacacacggcaggggtctgcgcaggtg
atgacagacttcgaggaacgtccaaacactgatagctccgtcatcacatttctccctggt
gagacagaaaagccttgtgtccttgagctgatggacgacaaactctatgaggaggtagag
gaactccgcctggttcttggcaccccacaaagcaactccccctttggggctgcagttgga
gaacagaatgaaactctgataaggatccaagatgacgctgataagactgttattaaattt
ggagaaaccaaatttaacatccgtgaacccaaagaaccgggacagtccgtggttgtaaaa
ataccagtgattcgccaaggagatacttcaaaagtttccatcgtgcgagtccacaccaag
gatggctctgccacctctggagaagactatcaccctgtgtcagaagaaattgagtttaag
gagggagaaacccagcatattgttaacattgaagtaatcttcgacggaattagagaaatg
agagaggccttcactgttcacctaaaacctgatgagaacatggtagcagagacacaggtg
accaaagccattgtgtatatagaagaaatgaacagcatggcagatgtcacttttccttct
gtccctcaaattgtgtcattactgatgtatgatgacacttccagagctaaagatagtgcg
ggtcccgtgtctggctatcctgtcgtctgtatcacagcttgcaaccctaaatacccagac
tatgacaaaacaggctctatctgtgcaagtgagaacatcaatgacaccttgacccggtac
cggtggctaattagcgcacccgctggccctgatggcgtcaccagccccatgagagaagtg
gactttgacaccttttttacatcatccaagatgatcaccttagattccatatacttccag
cctggctccagggtgcagtgtgcggcacgcgctgtgaacgccaatggcaatgagggcctg
gagctgatgagccctatcgtcaccatcggcagagaagaaggtctgtgtcagccccgggtg
ccggggacagtgggagcagaaccgttctcagctaagctgcgctacacgggccccgaggac
ccagactacacaaaccttatcaagctcacggtcacgatgccccacatagatggcatgctc
cctgtgatttccactaaagagctttccaactttgagctcaccctcagtcctgatggctca
agagttggaaaccaccagtgctccaaccttctggattacactgaagtgaagactcaccat
ggtttcttaactgatgctacaaaaaatccagaagtaattggagagacgcatccctaccag
tacagttcatctatcagaggctccagtaccttacgcttctatagaaacctgaacctggag
gcctgtttgtgggagtttgttagctactatgacatgtcagaacttctcactgactgtgga
ggcaccatcgggacagatggacaggtcttaaatctagtgcagtcctatgtgacccttcga
gtgcctctgtatgtttcctacgtgttccattccccggttggggtgggaggctggcaacat
tttgacttgaagtcggagctccgcctgacttttgtgtatgatactgccatcttgtggaat
gatggaatcggcagcccaccagaagccgaactccaaggttctctctacccaacgagcatg
cgcatcggggaagaggggcgcttggtggtgaacttcaagacggaggctcagttccatggc
ttgttcgtgctgtcccaccccgcgtccttcacgagctcaatgatcatgtccgctgatcat
ccaggcctgaccttctccctgcgcctcataaggagtgaaccgacctataaccagccagtg
cagcaatggagctttgtgtctgactttgcagtacgtgactattcagggacttacacagtg
aaactgctgccttgcaccactccatcgaatcaagagtaccgcctgccagtcacctgcaac
ccccgagagcctgtcacctttgacctcgacatacggttccaacaggtcagcgacccggtg
gcagctgagttcagcctgaacacccagatgtacctcctctccaggaagagtctctggttg
tcggacggctccgcgggatttgggcaagagagcgacgtcacctttgcagaaggtgacatc
atttatgggcgtgtcatggtagatcccgtccagaatctgggggactccttttactgcagc
attgagaaggtgttcctgtgcactggagctgacggctatgttcccaaatacagtcccacg
aatgcagaatacggctgcttagctgactctccttcactcttatatagatttaaaattgtg
gacaaagctcagccagaaacacaagccaccagttttggaaatgtcctgtttaatgcccag
ctggcagcggatgaccccgaagctattctcttagtgaatcagcctggatccgatgggttt
aaagtcgactcaacgccactctttcaggttgccctgggccgggaatggtacatacacacg
atctacacagtaagatcaaaagacaacgccaatcgaggcatcggcaaaagaagcaccgag
taccagcaccactctttagtgagtgcagggaagccgcaggcggtgaaccaggcccggaag
aggagggaggtcaggagcccgccccctctggcgtgggaaattggggctgacaacaaccgg
ggaacaaatatccagcacattgccctggaccgcacccacaggaagcaggtcccccagggg
cgagttcctcccgacggcgtcctgccccgcgagctcaaccggcccagctccgaagtcagc
ctggtcaccgtggttggaggcgtcgcggtggccttactcaccgtctgccttgccgccatc
acagcgatgctgtgcaggagccagaagggcaccaggaggaagggcgctctgaagggctcc
ggcagcagcaagcccatgatgcccccgcagagccatcacagcgacagctcagaggtttga
DBGET
integrated database retrieval system
