Ailuropoda melanoleuca (giant panda): 100481885
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Entry
100481885 CDS
T01329
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100481885 (TNRC6A)
03036 Chromosome and associated proteins [BR:
aml03036
]
100481885 (TNRC6A)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100481885 (TNRC6A)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100481885 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100481885
NCBI-ProteinID:
XP_034526127
Ensembl:
ENSAMEG00000009333
UniProt:
A0A7N5KHY6
LinkDB
All DBs
Position
10:complement(19770076..19871058)
Genome browser
AA seq
1911 aa
AA seq
DB search
MRELEAKATKDVERNLSRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIK
PSVSQPQPANSNNGTSTATSTNNNAKRATANNPQQQQQQQQPQPPQQPQPPQPPQQPPQQ
PPQPAQALPRYPREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLSSQSESSALTNQ
QPQNNGEVQNSKNQSDINHNTSGSHYENSQRGPVSSPSDSSTNCKNAVVNDSPEKEAWPS
TPGSDPELASECMDADSASSSESERNITIMASGSTGGEKDGLRNSTGLGSQSKFVVGSSS
NNVGHGSSTGPWGFSHGAIISTCQVSVDAPESKSESSNNRMNAWGTVSSSSNGGLNPSTL
NSASNHGAWPVLDNNGLALKGPVGSGSSGINIQCSTIGQMPNNQSINSKVGGSSTHGTWG
SLQETCESEVSGTQKVSFSGQPQNITTEMTGPNNTTNFMTSSLPNSGSVQNNELPSNTGA
WRVSTMNHPQIQAPSVMNGTSLSHLSNGEPKSGGSYGTTWGAYGSNYSGDKCSSPNGQAN
GDTVNATLMQPGINGPMGTNFQVNTNKGGGVWEPGAANSQSASWGSGNGANSGGSRRGWG
TPAQNTGTNIPSVEWSKLPSNQHSNDSANGNGKKFTNGWKSTEEEDQGSATSQTNEQNSV
WAKTGGTVESEGSTESTGRLEEKATGENQSRDRRKIDQHTLLQSIVNRTDLDPRVLSNSG
WGQTPIKQNTAWDTETSPRGERKTDNGTEAWGSSATQTFNSGACIDKTSPTSNDTSSVSG
WGDPKPALRWGDSKGSSCQGGWEDDSAATGMVKSNQWGNNKEEKSAWNDSQKSKQGWGDG
QKSNQGWSVSAGDNWGETSRSNHWGEANKKSSSGGSDSDRSVSGWNELGKTSSFTWGNNI
NPNNSSGWDESSKPNASQGWGDPPKSNQSLGWGDSSKPVSSPDWNKPQDIVGSWGIPPAT
GKPPGTGWLGGPIPAPTKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMW
NKNVPNGSSRSDQQAQVHPLLPPASAISNKEAGSGSGWGEPWGEPSTPATTVDNGTSAWG
KPIDSGPSWGEPIAAASNTSTWGSSSVGPQALSKSGPKSMQDGWCGDDMPLPGNRPTGWE
EEEDVEIGMWNSNSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERGTMKGGNKQEEAWIN
PFVKQFSNISFSRDSPEENVQSNKMDLSGGMLQDKRMEIDKHSLNIGDYNRTVGKGPGSR
PQISKESSMERSPYFDKNGNPSMFGVGNTAAQPRGMQQPPAQPLSSSQPNLRAQVPPPLL
SPQVPVSLLKYAPNNGGLNPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQRAQSQRS
VPSGNRQQQDQQGRPLSVQQQMMQQSRQLDPSLLVKQQTPPSQQQPLHQPAMKSFLENVM
PHTTPELQKGPSPINAFSNFPIGLNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLD
QNSSKHGAISSGFRLEESPFVPYDFMNSSTSPASPPGSIGDGWPRAKSPNGSSSVNWPPE
FRPGEPWKGYPNIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTS
AWSSIRASNYNVPLSSTAQSTSARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPS
RPPPGLTGQKPPLSTWDNSPLRVGGGWGNSDSRYTPGSSWGESSSGRITNWLVLKNLTPQ
IDGSTLRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFA
SEEEISRFFAQSQSLTPSPGWQSLGSSQSRLGSLDCSHSFSSRTDLNHWNGAGLSGTNCG
DLHGTSLWGTPHYSTSLWGPPSSSDPRGISSPSPINAFLSVDHLGGGGESM
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattggaagctaaagctaccaaagacgtagaaaggaatcttagcagggattta
gtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaagacgacaagaaaaag
aaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtgccagaacagataaag
cccagtgtaagccagcctcagcctgccaactctaataacggcacttccacagcaaccagc
actaataataatgccaagcgagccacagccaacaatccgcagcagcagcagcagcagcag
cagccacagccgccacagcagccacagccgccacagccgccacagcagccgccacagcag
ccgccgcagccagcacaggccttgcctcggtatccgcgagaagtaccaccacgatttcgc
caccaggagcacaaacagcttctaaagaggggtcagcattttcctgtcatagcagcaaac
ctgggatctgctgttaaagtgttaagcagccagtcagaaagcagtgctttaacaaatcaa
cagccacaaaataacggagaggtgcagaacagcaaaaaccagtcagatataaaccacaac
acttcaggatcccattatgaaaattcgcagcggggacctgtgtcttctccgagtgactct
agcacaaattgtaagaatgctgttgtaaacgactcccctgaaaaagaagcatggccctca
acccctggcagtgatccagagttggcttcagaatgtatggatgctgattctgcctccagt
tctgaatcagagagaaacatcactatcatggcttcagggagcaccggtggtgaaaaagat
ggccttcggaatagcactggactcggttcccaaagcaagtttgtggttgggagcagcagc
aataatgtgggccatggaagtagtactgggccatggggtttttcccacggagccataata
agcacatgtcaggtctctgtggatgctcctgaaagcaaatcagaaagcagcaacaataga
atgaatgcttggggcactgtaagttcttcatcaaatggagggttaaatccaagcactttg
aattcagctagcaaccatggtgcctggccagtattagacaacaatggacttgccctcaaa
gggcctgtagggagcggtagttctggcatcaatattcagtgcagtaccataggccagatg
cctaacaatcagagtattaactctaaagtgggtggttcttccacccatggtacctgggga
agccttcaggaaacttgtgaatctgaagtaagtggtacacagaaggtttcattcagtggt
caacctcagaatattaccactgagatgactggaccaaataacactactaactttatgacc
tctagtttaccaaactccggttcagtacagaataatgaactgcctagtaatacaggggcc
tggcgtgtgagcacaatgaatcatcctcagatacaggctccgtcggttatgaatggcact
tccctttctcaccttagcaatggagagccaaaaagtggaggctcttacggtactacgtgg
ggtgcctatggttctaattactctggagacaaatgttcgagccctaacggccaagctaat
ggtgacactgtgaatgcaactctaatgcagcctggcataaatgggcctatgggcactaac
tttcaagtgaacacaaataaaggaggaggcgtgtgggagcctggggcagcgaattcccag
agtgcatcatggggaagtggaaacggcgcaaattctggaggaagtcgacgaggatgggga
actcctgcacaaaacactggcactaatatacccagcgtggagtggagcaaactgcctagc
aatcagcattccaatgacagtgcaaatggcaatggtaagaagtttacaaacggatggaaa
tctactgaggaagaagatcagggttctgccacatctcagacaaatgagcagaacagcgtg
tgggccaaaacaggaggtacagtggagagtgaaggtagtacagaaagcactggacgcctt
gaggagaaagcaactggggaaaatcagagtagagataggagaaaaattgatcagcacaca
ttactccaaagcatcgtaaacagaactgacttggatccacgtgtcctctccaactccggt
tggggacagactcctattaagcagaatactgcctgggatacggaaacatcacctagaggg
gaaagaaagactgacaatgggacagaggcctggggaagctctgcaacacagacttttaac
tcaggggcatgtatagataagactagccctactagtaatgatacctcatctgtatcgggg
tggggagatcccaaacctgctctgaggtggggagattccaaaggctcaagctgccagggg
ggatgggaagatgactctgctgctacaggaatggtcaagagcaatcagtgggggaacaac
aaagaagagaagtccgcatggaatgattcgcaaaagagcaaacagggatggggtgatgga
caaaaatcaaaccaagggtggtccgtttctgctggtgataactggggggaaacttcaagg
agtaaccattggggtgaggctaataagaaatctagctcaggaggtagtgacagtgacaga
tccgtttccggttggaacgaacttggtaaaactagttcctttacttggggaaataacata
aatccaaataattcatcaggatgggatgaatcttctaaacctaacgcttcccagggatgg
ggagatcctccaaagtctaatcagtctctaggttggggagattcgtcaaagccagtcagt
tctccagactggaacaagccacaagacattgtcgggtcttggggaatcccaccagctaca
ggcaaacctcctggtacaggctggctgggagggcctataccagccccaacgaaagaagaa
gagcccacaggctgggaggaaccatccccagaatccatacgtcgcaaaatggagattgac
gacggaacttcagcttggggagatccgagcaaatacaactacaaaaatgtgaacatgtgg
aacaaaaacgtcccaaatggcagcagccgttcagaccagcaagcacaggtacacccgttg
ctaccgcctgcaagtgccatctccaacaaagaggcgggcagtggctctggctggggtgag
ccctggggggagccttctactccagccacaactgtggataatggtacttcagcatggggt
aagcccatagacagtggtcccagctggggggagcccattgctgcagcatccaacacatcc
acgtggggctccagctctgttggtcctcaagcattaagcaaatccgggccaaaatctatg
caagatggctggtgtggtgatgatatgccattgcctggaaatcgccccactggctgggaa
gaggaagaggatgtagagattggaatgtggaatagtaattcatctcaagagcttaactca
tctttaaattggccaccatatacaaagaaaatgtcatcgaagggtctgagtggcaaaaaa
aggagaagggaaaggggaaccatgaaaggtggaaacaaacaagaagaagcatggataaat
ccattcgttaaacagttttcaaatatcagtttttcgagggactcgccagaagaaaatgta
cagagcaataagatggatctttccggaggaatgttacaggacaaacgaatggaaatagat
aaacatagcctaaatattggtgattacaatcgaacggtcgggaaaggccctggttctcgg
cctcagatttccaaagagtcttccatggagcgcagcccttactttgataagaatggcaat
cccagtatgtttggtgttggaaacacagcagcacaaccccggggcatgcagcagcctcca
gcacaacctcttagttcatctcagccgaatctccgtgctcaagtgcctcctccattactc
tcccctcaggttccagtttcattgctgaagtatgcaccaaacaacggtggcctgaatccg
ctctttggccctcaacaggtagccatgctgaaccagctatcccaactaaaccagctttct
cagatctcccagttacagcgattgttagcgcagcagcaaagggcccagagtcagagaagc
gtgccttctgggaaccggcaacagcaagaccagcagggtcgacctcttagcgtgcagcag
caaatgatgcagcagtcccggcaactcgatcccagcctgttggtgaagcagcagaccccg
ccatctcagcagcagccactccatcagccagccatgaaatctttcctcgagaatgtcatg
ccccacactacacccgagctgcaaaaagggccatcaccaataaacgctttcagcaacttc
ccgataggcttgaactcaaacttgaatgtaaatatggatatgaacagtattaaagagcca
cagtcaagactaaggaagtggactacagtggacagcatttctgtgaacacatctttggat
caaaactccagcaaacatggtgctatttcaagtggtttcaggctggaagagtctccattt
gttccctatgactttatgaacagcagtacttctccagccagccctccgggttcaatagga
gacggctggccacgtgccaaatcgcctaacggctctagcagtgttaactggccaccagaa
tttcgccctggtgaaccatggaaaggttatccaaacattgaccctgaaactgacccttac
gtcactcctggcagtgtcataaacaatctttcaattaatactgtgcgggaagttgaccac
ctcagggacaggaacagtgggtcatcctcatccttgaacaccacgctgccttcaactagt
gcctggtcatccattcgtgcctccaactacaacgttcccctcagcagtacagcacaaagc
acttcagccagaaatagtgattccaaattgacatggtctcctggttcagttacaaacacc
tctctggctcatgagctgtggaaggtccctttaccacctaaaaacatcactgctccgtcc
cgcccacctccgggactgactggtcagaagccacccttgtctacgtgggataactctccc
cttcgtgtaggtggaggatggggaaattctgactccaggtacaccccaggttccagctgg
ggtgagagcagctcagggagaataacaaattggcttgttctaaagaaccttacacctcag
atcgatggctcaactctgcgtactctgtgcatgcagcatggtccactgataacattccac
ctgaacctcccacatggaaatgctttggtccgttacagttcaaaagaagaggtagtgaag
gcacaaaagtctctgcacatgtgtgtattggggaacactactattcttgctgagtttgcc
agtgaagaggagatcagccgtttctttgcacaaagtcagtctctgaccccttctcccggc
tggcagtctctcgggtccagccagagccggctgggctccctcgactgttcccactcgttc
tccagccggaccgatctcaatcactggaatggtgctgggctgtcgggaactaactgtgga
gaccttcacggcacttcactctgggggaccccacattattccacaagcctgtggggtcct
cccagcagcagcgacccccggggaattagcagcccatcccccattaatgcttttctttct
gttgaccacctgggtgggggtggagagtccatgtaa
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integrated database retrieval system
